RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 ARHGAP27Q6ZUM4 889 aa10.35□□□□□ -0.75
SRRM1-220ENST00000496882 PNISRQ8TF01 805 aaKnown RBP10.35□□□□□ -0.75
SRRM1-220ENST00000496882 GPBP1L1Q9HC44 474 aaPredicted RBP10.35□□□□□ -0.75
SRRM1-220ENST00000496882 SERPINB2P05120 415 aa10.34□□□□□ -0.75
SRRM1-220ENST00000496882 TM4SF1P30408 202 aa10.34□□□□□ -0.75
SRRM1-220ENST00000496882 EIF5P55010 431 aaKnown RBP10.34□□□□□ -0.75
SRRM1-220ENST00000496882 DCTN1Q14203 1278 aa10.34□□□□□ -0.75
SRRM1-220ENST00000496882 NFIXQ14938 502 aa10.34□□□□□ -0.75
SRRM1-220ENST00000496882 TAF7Q15545 349 aaPredicted RBP10.34□□□□□ -0.75
SRRM1-220ENST00000496882 DALRD3Q5D0E6 543 aaKnown RBP10.34□□□□□ -0.75
SRRM1-220ENST00000496882 BICDL1Q6ZP65 573 aa10.34□□□□□ -0.75
SRRM1-220ENST00000496882 KIF13BQ9NQT8 1826 aa10.34□□□□□ -0.75
SRRM1-220ENST00000496882 ATP10DQ9P241 1426 aa10.33□□□□□ -0.76
SRRM1-220ENST00000496882 NFE2L2Q16236 605 aa10.33□□□□□ -0.76
SRRM1-220ENST00000496882 ZNF652Q9Y2D9 606 aa10.33□□□□□ -0.76
SRRM1-220ENST00000496882 SIPA1L3O60292 1781 aaPredicted RBP10.33□□□□□ -0.76
SRRM1-220ENST00000496882 MYBBP1AQ9BQG0 1328 aaKnown RBP10.33□□□□□ -0.76
SRRM1-220ENST00000496882 UTRNP46939 3433 aa10.32□□□□□ -0.76
SRRM1-220ENST00000496882 N4BP2Q86UW6 1770 aaPredicted RBP10.32□□□□□ -0.76
SRRM1-220ENST00000496882 KCNQ3O43525 872 aa10.32□□□□□ -0.76
SRRM1-220ENST00000496882 A1BGP04217 495 aa10.32□□□□□ -0.76
SRRM1-220ENST00000496882 C1QTNF8P60827 252 aa10.32□□□□□ -0.76
SRRM1-220ENST00000496882 LMOD3Q0VAK6 560 aa10.32□□□□□ -0.76
SRRM1-220ENST00000496882 WDR43Q15061 677 aaKnown RBP eCLIP10.32□□□□□ -0.769e-8■■□□□ 12.8
SRRM1-220ENST00000496882 DZIP3Q86Y13 1208 aaKnown RBP10.32□□□□□ -0.76
SRRM1-220ENST00000496882 ZNF526Q8TF50 670 aaPredicted RBP10.32□□□□□ -0.76
SRRM1-220ENST00000496882 TBC1D2BQ9UPU7 963 aa10.32□□□□□ -0.76
SRRM1-220ENST00000496882 CARMIL3Q8ND23 1372 aa10.31□□□□□ -0.76
SRRM1-220ENST00000496882 H0YIN7 160 aa10.31□□□□□ -0.76
SRRM1-220ENST00000496882 PITPNM1O00562 1244 aa10.31□□□□□ -0.76
SRRM1-220ENST00000496882 CHRNA5P30532 468 aa10.31□□□□□ -0.76
SRRM1-220ENST00000496882 SETDB2Q96T68 719 aa10.31□□□□□ -0.76
SRRM1-220ENST00000496882 BCL2L12Q9HB09 334 aa10.31□□□□□ -0.76
SRRM1-220ENST00000496882 PDZRN3Q9UPQ7 1066 aa10.31□□□□□ -0.76
SRRM1-220ENST00000496882 USP16Q9Y5T5 823 aa10.31□□□□□ -0.76
SRRM1-220ENST00000496882 GOLGB1Q14789 3259 aaKnown RBP10.31□□□□□ -0.76
SRRM1-220ENST00000496882 SENP3-EIF4A1A0A087X0R7 540 aa10.3□□□□□ -0.76
SRRM1-220ENST00000496882 KCNA3P22001 575 aa10.3□□□□□ -0.76
SRRM1-220ENST00000496882 PDE6BP35913 854 aa10.3□□□□□ -0.76
SRRM1-220ENST00000496882 ST5P78524 1137 aa10.3□□□□□ -0.76
SRRM1-220ENST00000496882 TBC1D9BQ66K14 1250 aa10.3□□□□□ -0.76
SRRM1-220ENST00000496882 ZNF467Q7Z7K2 595 aaPredicted RBP10.3□□□□□ -0.76
SRRM1-220ENST00000496882 C2CD5Q86YS7 1000 aa10.3□□□□□ -0.76
SRRM1-220ENST00000496882 CNBD1Q8NA66 436 aa10.3□□□□□ -0.76
SRRM1-220ENST00000496882 PLEKHF1Q96S99 279 aa10.3□□□□□ -0.76
SRRM1-220ENST00000496882 KIAA1551Q9HCM1 1747 aa10.3□□□□□ -0.76
SRRM1-220ENST00000496882 ADCY9O60503 1353 aa10.29□□□□□ -0.76
SRRM1-220ENST00000496882 ZEB1P37275 1124 aaPredicted RBP10.29□□□□□ -0.76
SRRM1-220ENST00000496882 RIPK4P57078 832 aa10.29□□□□□ -0.76
SRRM1-220ENST00000496882 TTLL6Q8N841 843 aa10.29□□□□□ -0.76
SRRM1-220ENST00000496882 MIS18AQ9NYP9 233 aa10.29□□□□□ -0.76
SRRM1-220ENST00000496882 SCN7AQ01118 1682 aa10.28□□□□□ -0.76
SRRM1-220ENST00000496882 PRAMEF22A3QJZ6 481 aa10.28□□□□□ -0.76
SRRM1-220ENST00000496882 CAMTA2O94983 1202 aa10.28□□□□□ -0.76
SRRM1-220ENST00000496882 PIP4K2AP48426 406 aaPredicted RBP10.28□□□□□ -0.76
SRRM1-220ENST00000496882 CLEC4GQ6UXB4 293 aa10.28□□□□□ -0.76
SRRM1-220ENST00000496882 NBPF5PQ86XG9 351 aaPredicted RBP10.28□□□□□ -0.76
SRRM1-220ENST00000496882 ZNF622Q969S3 477 aaKnown RBP eCLIP10.28□□□□□ -0.763e-13■■□□□ 14
SRRM1-220ENST00000496882 BRIP1Q9BX63 1249 aa10.28□□□□□ -0.76
SRRM1-220ENST00000496882 WDR70Q9NW82 654 aa10.28□□□□□ -0.76
SRRM1-220ENST00000496882 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
SRRM1-220ENST00000496882 GTF2E1P29083 439 aaPredicted RBP10.27□□□□□ -0.77
SRRM1-220ENST00000496882 C9orf131Q5VYM1 1079 aa10.27□□□□□ -0.77
SRRM1-220ENST00000496882 KIF6Q6ZMV9 814 aa10.27□□□□□ -0.77
SRRM1-220ENST00000496882 RNF181Q9P0P0 153 aa10.27□□□□□ -0.77
SRRM1-220ENST00000496882 AFDNP55196 1824 aaKnown RBP10.26□□□□□ -0.77
SRRM1-220ENST00000496882 ARFGEF1Q9Y6D6 1849 aa10.26□□□□□ -0.77
SRRM1-220ENST00000496882 TMPOP42166 694 aaKnown RBP10.26□□□□□ -0.77
SRRM1-220ENST00000496882 EIF4A1P60842 406 aaKnown RBP10.26□□□□□ -0.77
SRRM1-220ENST00000496882 NEUROD2Q15784 382 aa10.26□□□□□ -0.77
SRRM1-220ENST00000496882 PRR5LQ6MZQ0 368 aa10.26□□□□□ -0.77
SRRM1-220ENST00000496882 C16orf71Q8IYS4 520 aaPredicted RBP10.26□□□□□ -0.77
SRRM1-220ENST00000496882 NGEFQ8N5V2 710 aa10.26□□□□□ -0.77
SRRM1-220ENST00000496882 THUMPD2Q9BTF0 503 aaKnown RBP10.26□□□□□ -0.77
SRRM1-220ENST00000496882 TSPYL2Q9H2G4 693 aaPredicted RBP10.26□□□□□ -0.77
SRRM1-220ENST00000496882 NIP7Q9Y221 180 aaKnown RBP eCLIP10.26□□□□□ -0.77
SRRM1-220ENST00000496882 RRP7AQ9Y3A4 280 aaKnown RBP10.26□□□□□ -0.77
SRRM1-220ENST00000496882 NRXN2Q9P2S2 1712 aa10.26□□□□□ -0.77
SRRM1-220ENST00000496882 BRCA1P38398 1863 aaKnown RBP10.25□□□□□ -0.77
SRRM1-220ENST00000496882 DLG5Q8TDM6 1919 aa10.25□□□□□ -0.77
SRRM1-220ENST00000496882 PDAP1Q13442 181 aaKnown RBP10.25□□□□□ -0.77
SRRM1-220ENST00000496882 TPTE2Q6XPS3 522 aa10.25□□□□□ -0.77
SRRM1-220ENST00000496882 CCDC146Q8IYE0 955 aa10.25□□□□□ -0.77
SRRM1-220ENST00000496882 CCDC24Q8N4L8 307 aa10.25□□□□□ -0.77
SRRM1-220ENST00000496882 CNKSR1Q969H4 720 aa10.25□□□□□ -0.77
SRRM1-220ENST00000496882 RUNDC1Q96C34 613 aa10.25□□□□□ -0.77
SRRM1-220ENST00000496882 BABAM1Q9NWV8 329 aa10.25□□□□□ -0.77
SRRM1-220ENST00000496882 KDM2BQ8NHM5 1336 aa10.25□□□□□ -0.77
SRRM1-220ENST00000496882 LAMB4A4D0S4 1761 aa10.24□□□□□ -0.77
SRRM1-220ENST00000496882 FAM177BA6PVY3 158 aa10.24□□□□□ -0.77
SRRM1-220ENST00000496882 NBPF26B4DH59 902 aa10.24□□□□□ -0.77
SRRM1-220ENST00000496882 MYL6BP14649 208 aa10.24□□□□□ -0.77
SRRM1-220ENST00000496882 LMNB1P20700 586 aa10.24□□□□□ -0.77
SRRM1-220ENST00000496882 SOGA3Q5TF21 947 aa10.24□□□□□ -0.77
SRRM1-220ENST00000496882 NBPF10Q6P3W6 841 aaKnown RBP10.24□□□□□ -0.77
SRRM1-220ENST00000496882 NBPF15Q8N660 670 aa10.24□□□□□ -0.77
SRRM1-220ENST00000496882 NYXQ9GZU5 481 aa10.24□□□□□ -0.77
SRRM1-220ENST00000496882 PRKRIP1Q9H875 184 aaPredicted RBP10.24□□□□□ -0.77
SRRM1-220ENST00000496882 ERBB4Q15303 1308 aa10.24□□□□□ -0.77
SRRM1-220ENST00000496882 BCORQ6W2J9 1755 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms