RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 AIMP1Q12904 312 aaKnown RBP18.15■□□□□ 0.5
UBXN11-216ENST00000496466 CWF19L2Q2TBE0 894 aaKnown RBP18.15■□□□□ 0.5
UBXN11-216ENST00000496466 DDX21Q9NR30 783 aaKnown RBP eCLIP18.15■□□□□ 0.5
UBXN11-216ENST00000496466 ZNF335Q9H4Z2 1342 aaPredicted RBP18.14■□□□□ 0.49
UBXN11-216ENST00000496466 KDM4FA0A1W2PPD8 638 aa18.14■□□□□ 0.49
UBXN11-216ENST00000496466 HSP90AB4PQ58FF6 505 aa18.14■□□□□ 0.49
UBXN11-216ENST00000496466 ALDH1L1O75891 902 aa18.13■□□□□ 0.49
UBXN11-216ENST00000496466 ZNF496Q96IT1 587 aaPredicted RBP18.13■□□□□ 0.49
UBXN11-216ENST00000496466 DCAF5Q96JK2 942 aa18.13■□□□□ 0.49
UBXN11-216ENST00000496466 SLAIN2Q9P270 581 aa18.13■□□□□ 0.49
UBXN11-216ENST00000496466 STRCQ7RTU9 1775 aa18.13■□□□□ 0.49
UBXN11-216ENST00000496466 MTX1Q13505 466 aa18.12■□□□□ 0.49
UBXN11-216ENST00000496466 C9orf78Q9NZ63 289 aaPredicted RBP18.12■□□□□ 0.49
UBXN11-216ENST00000496466 ABCC6O95255 1503 aa18.12■□□□□ 0.49
UBXN11-216ENST00000496466 HSPA4P34932 840 aa18.12■□□□□ 0.49
UBXN11-216ENST00000496466 MYL6BP14649 208 aa18.11■□□□□ 0.49
UBXN11-216ENST00000496466 PRDM11Q9NQV5 511 aa18.11■□□□□ 0.49
UBXN11-216ENST00000496466 USP42Q9H9J4 1324 aaKnown RBP18.11■□□□□ 0.49
UBXN11-216ENST00000496466 SGSM2O43147 1006 aa18.11■□□□□ 0.49
UBXN11-216ENST00000496466 PRPF40AO75400 957 aaKnown RBP18.11■□□□□ 0.49
UBXN11-216ENST00000496466 NCLP19338 710 aaKnown RBP18.11■□□□□ 0.49
UBXN11-216ENST00000496466 CNTROBQ8N137 903 aa18.11■□□□□ 0.49
UBXN11-216ENST00000496466 INTS4Q96HW7 963 aaKnown RBP18.11■□□□□ 0.49
UBXN11-216ENST00000496466 C5P01031 1676 aa18.1■□□□□ 0.49
UBXN11-216ENST00000496466 ZNF445P59923 1031 aa18.1■□□□□ 0.49
UBXN11-216ENST00000496466 NOL8Q76FK4 1167 aaKnown RBP18.1■□□□□ 0.49
UBXN11-216ENST00000496466 UPF3BQ9BZI7 483 aaKnown RBP18.1■□□□□ 0.49
UBXN11-216ENST00000496466 DDX58O95786 925 aaKnown RBP18.1■□□□□ 0.49
UBXN11-216ENST00000496466 OS9Q13438 667 aaPredicted RBP18.1■□□□□ 0.49
UBXN11-216ENST00000496466 CAVIN1Q6NZI2 390 aaKnown RBP18.1■□□□□ 0.49
UBXN11-216ENST00000496466 LINS1Q8NG48 757 aa18.1■□□□□ 0.49
UBXN11-216ENST00000496466 SOS2Q07890 1332 aaPredicted RBP18.09■□□□□ 0.49
UBXN11-216ENST00000496466 BRD1O95696 1058 aa18.09■□□□□ 0.49
UBXN11-216ENST00000496466 CHAMP1Q96JM3 812 aa18.09■□□□□ 0.49
UBXN11-216ENST00000496466 USP16Q9Y5T5 823 aa18.09■□□□□ 0.49
UBXN11-216ENST00000496466 TTC41PQ6P2S7 1318 aa18.09■□□□□ 0.49
UBXN11-216ENST00000496466 RIC3Q7Z5B4 369 aa18.09■□□□□ 0.49
UBXN11-216ENST00000496466 TTC5Q8N0Z6 440 aa18.09■□□□□ 0.49
UBXN11-216ENST00000496466 GPT2Q8TD30 523 aa18.09■□□□□ 0.49
UBXN11-216ENST00000496466 RAD50Q92878 1312 aa18.08■□□□□ 0.49
UBXN11-216ENST00000496466 PIP4K2AP48426 406 aaPredicted RBP18.08■□□□□ 0.48
UBXN11-216ENST00000496466 CABP4P57796 275 aa18.08■□□□□ 0.48
UBXN11-216ENST00000496466 ZSCAN23Q3MJ62 389 aa18.08■□□□□ 0.48
UBXN11-216ENST00000496466 FOXD4L5Q5VV16 416 aaPredicted RBP18.08■□□□□ 0.48
UBXN11-216ENST00000496466 XAGE3Q8WTP9 111 aa18.08■□□□□ 0.48
UBXN11-216ENST00000496466 FOXD4L4Q8WXT5 416 aaPredicted RBP18.08■□□□□ 0.48
UBXN11-216ENST00000496466 LSG1Q9H089 658 aaKnown RBP18.08■□□□□ 0.48
UBXN11-216ENST00000496466 PKD1L3Q7Z443 1732 aa18.08■□□□□ 0.48
UBXN11-216ENST00000496466 TOM1L2Q6ZVM7 507 aa18.07■□□□□ 0.48
UBXN11-216ENST00000496466 MRC1P22897 1456 aa18.07■□□□□ 0.48
UBXN11-216ENST00000496466 WDR17Q8IZU2 1322 aa18.07■□□□□ 0.48
UBXN11-216ENST00000496466 GRM8O00222 908 aa18.07■□□□□ 0.48
UBXN11-216ENST00000496466 GLRX3O76003 335 aaKnown RBP18.07■□□□□ 0.48
UBXN11-216ENST00000496466 IGKV5-2P06315 115 aa18.07■□□□□ 0.48
UBXN11-216ENST00000496466 SNRPA1P09661 255 aaKnown RBP18.07■□□□□ 0.48
UBXN11-216ENST00000496466 COPS6Q7L5N1 327 aa18.07■□□□□ 0.48
UBXN11-216ENST00000496466 PLEKHG2Q9H7P9 1386 aa18.07■□□□□ 0.48
UBXN11-216ENST00000496466 CLASRPQ8N2M8 674 aaKnown RBP18.06■□□□□ 0.48
UBXN11-216ENST00000496466 KAZALD1Q96I82 304 aa18.06■□□□□ 0.48
UBXN11-216ENST00000496466 SUCLG2Q96I99 432 aa18.06■□□□□ 0.48
UBXN11-216ENST00000496466 PA2G4Q9UQ80 394 aaKnown RBP18.06■□□□□ 0.48
UBXN11-216ENST00000496466 HDAC5Q9UQL6 1122 aa18.06■□□□□ 0.48
UBXN11-216ENST00000496466 SNX14Q9Y5W7 946 aa18.06■□□□□ 0.48
UBXN11-216ENST00000496466 NASPP49321 788 aaPredicted RBP18.06■□□□□ 0.48
UBXN11-216ENST00000496466 CLCN1P35523 988 aa18.05■□□□□ 0.48
UBXN11-216ENST00000496466 FMNL2Q96PY5 1086 aa18.05■□□□□ 0.48
UBXN11-216ENST00000496466 LARP1Q6PKG0 1096 aaKnown RBP18.05■□□□□ 0.48
UBXN11-216ENST00000496466 CWC27Q6UX04 472 aaKnown RBP18.05■□□□□ 0.48
UBXN11-216ENST00000496466 LRP10Q7Z4F1 713 aa18.05■□□□□ 0.48
UBXN11-216ENST00000496466 UTYO14607 1347 aa18.05■□□□□ 0.48
UBXN11-216ENST00000496466 ERC1Q8IUD2 1116 aa18.04■□□□□ 0.48
UBXN11-216ENST00000496466 BICC1Q9H694 974 aaKnown RBP18.04■□□□□ 0.48
UBXN11-216ENST00000496466 ECHDC1Q9NTX5 307 aa18.04■□□□□ 0.48
UBXN11-216ENST00000496466 RBM27Q9P2N5 1060 aaKnown RBP18.04■□□□□ 0.48
UBXN11-216ENST00000496466 ZCRB1Q8TBF4 217 aaKnown RBP18.04■□□□□ 0.48
UBXN11-216ENST00000496466 MYD88Q99836 296 aa18.04■□□□□ 0.48
UBXN11-216ENST00000496466 COL5A2P05997 1499 aaPredicted RBP18.03■□□□□ 0.48
UBXN11-216ENST00000496466 NEURL1BA8MQ27 555 aa18.03■□□□□ 0.48
UBXN11-216ENST00000496466 CCDC173Q0VFZ6 552 aa18.03■□□□□ 0.48
UBXN11-216ENST00000496466 KIAA1211Q6ZU35 1233 aa18.03■□□□□ 0.48
UBXN11-216ENST00000496466 RASEFQ8IZ41 740 aa18.03■□□□□ 0.48
UBXN11-216ENST00000496466 PPP1R9BQ96SB3 815 aa18.03■□□□□ 0.48
UBXN11-216ENST00000496466 TRIM44Q96DX7 344 aaPredicted RBP18.03■□□□□ 0.48
UBXN11-216ENST00000496466 TTC14Q96N46 770 aa18.03■□□□□ 0.48
UBXN11-216ENST00000496466 METTL22Q9BUU2 404 aaPredicted RBP18.03■□□□□ 0.48
UBXN11-216ENST00000496466 NSFL1CQ9UNZ2 370 aaKnown RBP18.03■□□□□ 0.48
UBXN11-216ENST00000496466 ESPNB1AK53 854 aa18.02■□□□□ 0.48
UBXN11-216ENST00000496466 IFIT2P09913 472 aaKnown RBP18.02■□□□□ 0.48
UBXN11-216ENST00000496466 NEXNQ0ZGT2 675 aa18.02■□□□□ 0.48
UBXN11-216ENST00000496466 STRN4Q9NRL3 753 aa18.02■□□□□ 0.48
UBXN11-216ENST00000496466 DIAPH3Q9NSV4 1193 aa18.02■□□□□ 0.48
UBXN11-216ENST00000496466 ERBB4Q15303 1308 aa18.02■□□□□ 0.47
UBXN11-216ENST00000496466 PCDH11XQ9BZA7 1347 aa18.02■□□□□ 0.47
UBXN11-216ENST00000496466 PCDH11YQ9BZA8 1340 aa18.02■□□□□ 0.47
UBXN11-216ENST00000496466 GCKRQ14397 625 aa18.01■□□□□ 0.47
UBXN11-216ENST00000496466 ANKRD13DQ6ZTN6 518 aa18.01■□□□□ 0.47
UBXN11-216ENST00000496466 GPATCH3Q96I76 525 aa18.01■□□□□ 0.47
UBXN11-216ENST00000496466 RUFY2Q8WXA3 655 aa18.01■□□□□ 0.47
UBXN11-216ENST00000496466 TMEM63CQ9P1W3 806 aa18.01■□□□□ 0.47
UBXN11-216ENST00000496466 AACSQ86V21 672 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms