RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 TESK2Q96S53 571 aa16.18■□□□□ 0.18
ATG3-209ENST00000496423 THSD7BQ9C0I4 1608 aa16.18■□□□□ 0.18
ATG3-209ENST00000496423 CASP8AP2Q9UKL3 1982 aa16.18■□□□□ 0.18
ATG3-209ENST00000496423 LMOD1P29536 600 aaPredicted RBP16.17■□□□□ 0.18
ATG3-209ENST00000496423 CCDC93Q567U6 631 aa16.17■□□□□ 0.18
ATG3-209ENST00000496423 MASTLQ96GX5 879 aa16.17■□□□□ 0.18
ATG3-209ENST00000496423 ADAMTSL1Q8N6G6 1762 aa16.16■□□□□ 0.18
ATG3-209ENST00000496423 CYP19A1P11511 503 aaPredicted RBP16.16■□□□□ 0.18
ATG3-209ENST00000496423 ST5P78524 1137 aa16.16■□□□□ 0.18
ATG3-209ENST00000496423 PRPF40BQ6NWY9 871 aaKnown RBP16.16■□□□□ 0.18
ATG3-209ENST00000496423 NPM2Q86SE8 214 aaKnown RBP16.16■□□□□ 0.18
ATG3-209ENST00000496423 GPC2Q8N158 579 aa16.16■□□□□ 0.18
ATG3-209ENST00000496423 CARMIL3Q8ND23 1372 aa16.15■□□□□ 0.18
ATG3-209ENST00000496423 BRPF1P55201 1214 aaPredicted RBP16.15■□□□□ 0.18
ATG3-209ENST00000496423 FKBP4Q02790 459 aaKnown RBP eCLIP16.15■□□□□ 0.18
ATG3-209ENST00000496423 EIF4A2Q14240 407 aaKnown RBP16.15■□□□□ 0.18
ATG3-209ENST00000496423 BCL2L12Q9HB09 334 aa16.15■□□□□ 0.18
ATG3-209ENST00000496423 TLL2Q9Y6L7 1015 aa16.15■□□□□ 0.18
ATG3-209ENST00000496423 RNF123Q5XPI4 1314 aa16.15■□□□□ 0.18
ATG3-209ENST00000496423 TRPM7Q96QT4 1865 aa16.14■□□□□ 0.17
ATG3-209ENST00000496423 RTKN2Q8IZC4 609 aa16.14■□□□□ 0.17
ATG3-209ENST00000496423 JDP2Q8WYK2 163 aa16.14■□□□□ 0.17
ATG3-209ENST00000496423 CACNA1SQ13698 1873 aa16.14■□□□□ 0.17
ATG3-209ENST00000496423 SLX4Q8IY92 1834 aa16.13■□□□□ 0.17
ATG3-209ENST00000496423 AOC2O75106 756 aa16.13■□□□□ 0.17
ATG3-209ENST00000496423 PRR5LQ6MZQ0 368 aa16.13■□□□□ 0.17
ATG3-209ENST00000496423 ANKRD31Q8N7Z5 1873 aa16.13■□□□□ 0.17
ATG3-209ENST00000496423 ZNF541Q9H0D2 1346 aa16.13■□□□□ 0.17
ATG3-209ENST00000496423 SRGNP10124 158 aa16.12■□□□□ 0.17
ATG3-209ENST00000496423 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
ATG3-209ENST00000496423 EIF6P56537 245 aaKnown RBP16.12■□□□□ 0.17
ATG3-209ENST00000496423 SOX10P56693 466 aa16.12■□□□□ 0.17
ATG3-209ENST00000496423 CNBD1Q8NA66 436 aa16.12■□□□□ 0.17
ATG3-209ENST00000496423 HHIPL1Q96JK4 782 aa16.12■□□□□ 0.17
ATG3-209ENST00000496423 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
ATG3-209ENST00000496423 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
ATG3-209ENST00000496423 ZBTB1Q9Y2K1 713 aa16.12■□□□□ 0.17
ATG3-209ENST00000496423 FZD9O00144 591 aa16.11■□□□□ 0.17
ATG3-209ENST00000496423 STARD3NLO95772 234 aa16.11■□□□□ 0.17
ATG3-209ENST00000496423 TBC1D9BQ66K14 1250 aa16.11■□□□□ 0.17
ATG3-209ENST00000496423 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
ATG3-209ENST00000496423 NBPF15Q8N660 670 aa16.11■□□□□ 0.17
ATG3-209ENST00000496423 ARFGEF2Q9Y6D5 1785 aa16.1■□□□□ 0.17
ATG3-209ENST00000496423 USP50Q70EL3 339 aaPredicted RBP16.1■□□□□ 0.17
ATG3-209ENST00000496423 ZNF277Q9NRM2 450 aaPredicted RBP16.1■□□□□ 0.17
ATG3-209ENST00000496423 LTBP1Q14766 1721 aa16.09■□□□□ 0.17
ATG3-209ENST00000496423 IARSP41252 1262 aaKnown RBP16.09■□□□□ 0.17
ATG3-209ENST00000496423 CST9Q5W186 159 aa16.09■□□□□ 0.17
ATG3-209ENST00000496423 CCDC24Q8N4L8 307 aa16.09■□□□□ 0.17
ATG3-209ENST00000496423 SLC52A2Q9HAB3 445 aa16.09■□□□□ 0.17
ATG3-209ENST00000496423 GJA3Q9Y6H8 435 aa16.09■□□□□ 0.17
ATG3-209ENST00000496423 COL11A2P13942 1736 aaPredicted RBP16.08■□□□□ 0.17
ATG3-209ENST00000496423 NPR1P16066 1061 aa16.07■□□□□ 0.16
ATG3-209ENST00000496423 EIF5P55010 431 aaKnown RBP16.07■□□□□ 0.16
ATG3-209ENST00000496423 NOGQ13253 232 aa16.07■□□□□ 0.16
ATG3-209ENST00000496423 CIAPIN1Q6FI81 312 aa16.07■□□□□ 0.16
ATG3-209ENST00000496423 SAPCD2Q86UD0 394 aa16.07■□□□□ 0.16
ATG3-209ENST00000496423 SCN11AQ9UI33 1791 aa16.07■□□□□ 0.16
ATG3-209ENST00000496423 ALDH1B1P30837 517 aa16.06■□□□□ 0.16
ATG3-209ENST00000496423 AKAP4Q5JQC9 854 aa16.06■□□□□ 0.16
ATG3-209ENST00000496423 SYNE4Q8N205 404 aa16.06■□□□□ 0.16
ATG3-209ENST00000496423 C7orf43Q8WVR3 580 aa16.06■□□□□ 0.16
ATG3-209ENST00000496423 TEX13AQ9BXU3 409 aaPredicted RBP16.06■□□□□ 0.16
ATG3-209ENST00000496423 CELF2O95319 508 aaKnown RBP16.05■□□□□ 0.16
ATG3-209ENST00000496423 CARD14Q9BXL6 1004 aa16.05■□□□□ 0.16
ATG3-209ENST00000496423 ZNF330Q9Y3S2 320 aaPredicted RBP16.05■□□□□ 0.16
ATG3-209ENST00000496423 FMR1Q06787 632 aaKnown RBP eCLIP16.04■□□□□ 0.16
ATG3-209ENST00000496423 SLC39A6Q13433 755 aa16.04■□□□□ 0.16
ATG3-209ENST00000496423 TTC5Q8N0Z6 440 aa16.04■□□□□ 0.16
ATG3-209ENST00000496423 TBC1D2BQ9UPU7 963 aa16.04■□□□□ 0.16
ATG3-209ENST00000496423 TRAF5O00463 557 aa16.03■□□□□ 0.16
ATG3-209ENST00000496423 TNNT2P45379 298 aaPredicted RBP16.03■□□□□ 0.16
ATG3-209ENST00000496423 SAGE1Q9NXZ1 904 aa16.03■□□□□ 0.16
ATG3-209ENST00000496423 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
ATG3-209ENST00000496423 EPS15P42566 896 aa16.02■□□□□ 0.16
ATG3-209ENST00000496423 GRIPAP1Q4V328 841 aa16.02■□□□□ 0.16
ATG3-209ENST00000496423 NBPF5PQ86XG9 351 aaPredicted RBP16.02■□□□□ 0.16
ATG3-209ENST00000496423 IL6STP40189 918 aaPredicted RBP16.01■□□□□ 0.15
ATG3-209ENST00000496423 CC2D2BQ6DHV5 1058 aa16.01■□□□□ 0.15
ATG3-209ENST00000496423 PSMD1Q99460 953 aa16.01■□□□□ 0.15
ATG3-209ENST00000496423 ADARB2Q9NS39 739 aaKnown RBP16.01■□□□□ 0.15
ATG3-209ENST00000496423 TPTE2Q6XPS3 522 aa16■□□□□ 0.15
ATG3-209ENST00000496423 RNMTO43148 476 aaKnown RBP15.99■□□□□ 0.15
ATG3-209ENST00000496423 SCNN1DP51172 638 aa15.99■□□□□ 0.15
ATG3-209ENST00000496423 SULT6B1Q6IMI4 303 aa15.99■□□□□ 0.15
ATG3-209ENST00000496423 CTU1Q7Z7A3 348 aaKnown RBP15.99■□□□□ 0.15
ATG3-209ENST00000496423 ZNF408Q9H9D4 720 aa15.99■□□□□ 0.15
ATG3-209ENST00000496423 LGR6Q9HBX8 967 aa15.99■□□□□ 0.15
ATG3-209ENST00000496423 ZNF652Q9Y2D9 606 aa15.99■□□□□ 0.15
ATG3-209ENST00000496423 SCN7AQ01118 1682 aa15.99■□□□□ 0.15
ATG3-209ENST00000496423 PKN2Q16513 984 aaKnown RBP15.98■□□□□ 0.15
ATG3-209ENST00000496423 HABP4Q5JVS0 413 aaKnown RBP15.98■□□□□ 0.15
ATG3-209ENST00000496423 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
ATG3-209ENST00000496423 KLRG2A4D1S0 409 aaPredicted RBP15.97■□□□□ 0.15
ATG3-209ENST00000496423 CLEC4GQ6UXB4 293 aa15.97■□□□□ 0.15
ATG3-209ENST00000496423 CDC37L1Q7L3B6 337 aa15.97■□□□□ 0.15
ATG3-209ENST00000496423 CCDC102AQ96A19 550 aa15.97■□□□□ 0.15
ATG3-209ENST00000496423 GTF2E1P29083 439 aaPredicted RBP15.96■□□□□ 0.15
ATG3-209ENST00000496423 AEBP1Q8IUX7 1158 aa15.96■□□□□ 0.15
ATG3-209ENST00000496423 ZC3H15Q8WU90 426 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms