RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 NBPF26B4DH59 902 aa19.04■□□□□ 0.64
CXCL12-208ENST00000496375 NBPF10Q6P3W6 841 aaKnown RBP19.04■□□□□ 0.64
CXCL12-208ENST00000496375 CLEC4GQ6UXB4 293 aa19.04■□□□□ 0.64
CXCL12-208ENST00000496375 NBPF15Q8N660 670 aa19.04■□□□□ 0.64
CXCL12-208ENST00000496375 TIAM2Q8IVF5 1701 aa19.03■□□□□ 0.64
CXCL12-208ENST00000496375 C21orf2O43822 256 aa19.03■□□□□ 0.64
CXCL12-208ENST00000496375 PLEKHF1Q96S99 279 aa19.03■□□□□ 0.64
CXCL12-208ENST00000496375 PRKRIP1Q9H875 184 aaPredicted RBP19.03■□□□□ 0.64
CXCL12-208ENST00000496375 ZNF652Q9Y2D9 606 aa19.03■□□□□ 0.64
CXCL12-208ENST00000496375 MYBBP1AQ9BQG0 1328 aaKnown RBP19.02■□□□□ 0.64
CXCL12-208ENST00000496375 LAMB4A4D0S4 1761 aa19.02■□□□□ 0.64
CXCL12-208ENST00000496375 NBPF5PQ86XG9 351 aaPredicted RBP19.02■□□□□ 0.64
CXCL12-208ENST00000496375 CACNA1SQ13698 1873 aa19.02■□□□□ 0.64
CXCL12-208ENST00000496375 KDM3BQ7LBC6 1761 aa19.01■□□□□ 0.63
CXCL12-208ENST00000496375 GLTPD2A6NH11 291 aa19.01■□□□□ 0.63
CXCL12-208ENST00000496375 SRGNP10124 158 aa19.01■□□□□ 0.63
CXCL12-208ENST00000496375 NFE2L2Q16236 605 aa19.01■□□□□ 0.63
CXCL12-208ENST00000496375 STYK1Q6J9G0 422 aa19.01■□□□□ 0.63
CXCL12-208ENST00000496375 PNISRQ8TF01 805 aaKnown RBP19.01■□□□□ 0.63
CXCL12-208ENST00000496375 CNKSR1Q969H4 720 aa19.01■□□□□ 0.63
CXCL12-208ENST00000496375 FER1L6Q2WGJ9 1857 aa19.01■□□□□ 0.63
CXCL12-208ENST00000496375 SLX4Q8IY92 1834 aa19■□□□□ 0.63
CXCL12-208ENST00000496375 FSTL1Q12841 308 aa19■□□□□ 0.63
CXCL12-208ENST00000496375 MASTLQ96GX5 879 aa19■□□□□ 0.63
CXCL12-208ENST00000496375 NIP7Q9Y221 180 aaKnown RBP eCLIP19■□□□□ 0.63
CXCL12-208ENST00000496375 MAPK8IP3Q9UPT6 1336 aa19■□□□□ 0.63
CXCL12-208ENST00000496375 THUMPD2Q9BTF0 503 aaKnown RBP18.99■□□□□ 0.63
CXCL12-208ENST00000496375 PNNQ9H307 717 aaKnown RBP18.99■□□□□ 0.63
CXCL12-208ENST00000496375 ARFGEF2Q9Y6D5 1785 aa18.98■□□□□ 0.63
CXCL12-208ENST00000496375 WDR90Q96KV7 1748 aa18.98■□□□□ 0.63
CXCL12-208ENST00000496375 RGL2O15211 777 aa18.98■□□□□ 0.63
CXCL12-208ENST00000496375 HLFQ16534 295 aa18.98■□□□□ 0.63
CXCL12-208ENST00000496375 PRPF40BQ6NWY9 871 aaKnown RBP18.98■□□□□ 0.63
CXCL12-208ENST00000496375 DICER1Q9UPY3 1922 aaKnown RBP18.98■□□□□ 0.63
CXCL12-208ENST00000496375 FAM177BA6PVY3 158 aa18.97■□□□□ 0.63
CXCL12-208ENST00000496375 TPTE2Q6XPS3 522 aa18.97■□□□□ 0.63
CXCL12-208ENST00000496375 NGEFQ8N5V2 710 aa18.97■□□□□ 0.63
CXCL12-208ENST00000496375 TAOK3Q9H2K8 898 aa18.97■□□□□ 0.63
CXCL12-208ENST00000496375 LTBP3Q9NS15 1303 aa18.97■□□□□ 0.63
CXCL12-208ENST00000496375 VEGFAP15692 232 aaPredicted RBP18.96■□□□□ 0.63
CXCL12-208ENST00000496375 EIF4A1P60842 406 aaKnown RBP18.96■□□□□ 0.63
CXCL12-208ENST00000496375 ERFEQ4G0M1 354 aa18.96■□□□□ 0.63
CXCL12-208ENST00000496375 DNAJC5GQ8N7S2 189 aa18.96■□□□□ 0.63
CXCL12-208ENST00000496375 NPR1P16066 1061 aa18.95■□□□□ 0.62
CXCL12-208ENST00000496375 HTRA3P83110 453 aa18.95■□□□□ 0.62
CXCL12-208ENST00000496375 SOGA3Q5TF21 947 aa18.95■□□□□ 0.62
CXCL12-208ENST00000496375 SMC1BQ8NDV3 1235 aa18.95■□□□□ 0.62
CXCL12-208ENST00000496375 DPY19L2Q6NUT2 758 aa18.94■□□□□ 0.62
CXCL12-208ENST00000496375 RRP7AQ9Y3A4 280 aaKnown RBP18.94■□□□□ 0.62
CXCL12-208ENST00000496375 KLRG2A4D1S0 409 aaPredicted RBP18.93■□□□□ 0.62
CXCL12-208ENST00000496375 MYL6BP14649 208 aa18.93■□□□□ 0.62
CXCL12-208ENST00000496375 NUP98P52948 1817 aa18.93■□□□□ 0.62
CXCL12-208ENST00000496375 POTECB2RU33 542 aa18.92■□□□□ 0.62
CXCL12-208ENST00000496375 ERVV-1B6SEH8 477 aa18.92■□□□□ 0.62
CXCL12-208ENST00000496375 GTF2E1P29083 439 aaPredicted RBP18.92■□□□□ 0.62
CXCL12-208ENST00000496375 KIF6Q6ZMV9 814 aa18.92■□□□□ 0.62
CXCL12-208ENST00000496375 C7orf43Q8WVR3 580 aa18.92■□□□□ 0.62
CXCL12-208ENST00000496375 MAP3K15Q6ZN16 1313 aa18.92■□□□□ 0.62
CXCL12-208ENST00000496375 RIPK4P57078 832 aa18.91■□□□□ 0.62
CXCL12-208ENST00000496375 CCDC93Q567U6 631 aa18.91■□□□□ 0.62
CXCL12-208ENST00000496375 TTLL7Q6ZT98 887 aa18.91■□□□□ 0.62
CXCL12-208ENST00000496375 TSPYL4Q9UJ04 414 aa18.91■□□□□ 0.62
CXCL12-208ENST00000496375 NYXQ9GZU5 481 aa18.9■□□□□ 0.62
CXCL12-208ENST00000496375 ZBTB3Q9H5J0 574 aa18.9■□□□□ 0.62
CXCL12-208ENST00000496375 NUTM1Q86Y26 1132 aa18.89■□□□□ 0.61
CXCL12-208ENST00000496375 ABCC12Q96J65 1359 aa18.89■□□□□ 0.61
CXCL12-208ENST00000496375 DDNO94850 711 aaPredicted RBP18.88■□□□□ 0.61
CXCL12-208ENST00000496375 GPTP24298 496 aa18.88■□□□□ 0.61
CXCL12-208ENST00000496375 TMPOP42166 694 aaKnown RBP18.88■□□□□ 0.61
CXCL12-208ENST00000496375 IFFO2Q5TF58 517 aa18.88■□□□□ 0.61
CXCL12-208ENST00000496375 OLFM4Q6UX06 510 aa18.88■□□□□ 0.61
CXCL12-208ENST00000496375 KLRG1Q96E93 195 aa18.88■□□□□ 0.61
CXCL12-208ENST00000496375 ERBB4Q15303 1308 aa18.88■□□□□ 0.61
CXCL12-208ENST00000496375 ALDH1B1P30837 517 aa18.87■□□□□ 0.61
CXCL12-208ENST00000496375 FKBP4Q02790 459 aaKnown RBP eCLIP18.87■□□□□ 0.61
CXCL12-208ENST00000496375 UBN2Q6ZU65 1347 aa18.87■□□□□ 0.61
CXCL12-208ENST00000496375 LMOD3Q0VAK6 560 aa18.86■□□□□ 0.61
CXCL12-208ENST00000496375 CRY2Q49AN0 593 aa18.86■□□□□ 0.61
CXCL12-208ENST00000496375 ZNF277Q9NRM2 450 aaPredicted RBP18.86■□□□□ 0.61
CXCL12-208ENST00000496375 IBTKQ9P2D0 1353 aaPredicted RBP18.85■□□□□ 0.61
CXCL12-208ENST00000496375 ANP32CO43423 234 aa18.85■□□□□ 0.61
CXCL12-208ENST00000496375 EIF2S2P20042 333 aaKnown RBP18.85■□□□□ 0.61
CXCL12-208ENST00000496375 SUSD4Q5VX71 490 aa18.85■□□□□ 0.61
CXCL12-208ENST00000496375 GIGYF2Q6Y7W6 1299 aaKnown RBP18.85■□□□□ 0.61
CXCL12-208ENST00000496375 RTKN2Q8IZC4 609 aa18.85■□□□□ 0.61
CXCL12-208ENST00000496375 BABAM1Q9NWV8 329 aa18.85■□□□□ 0.61
CXCL12-208ENST00000496375 PCNTO95613 3336 aa18.84■□□□□ 0.61
CXCL12-208ENST00000496375 CCDC146Q8IYE0 955 aa18.84■□□□□ 0.61
CXCL12-208ENST00000496375 ZNF34Q8IZ26 560 aa18.84■□□□□ 0.61
CXCL12-208ENST00000496375 RIC1Q4ADV7 1423 aa18.83■□□□□ 0.61
CXCL12-208ENST00000496375 PDIA6Q15084 440 aa18.83■□□□□ 0.6
CXCL12-208ENST00000496375 LRP10Q7Z4F1 713 aa18.83■□□□□ 0.6
CXCL12-208ENST00000496375 JMYQ8N9B5 988 aa18.83■□□□□ 0.6
CXCL12-208ENST00000496375 RPGRQ92834 1020 aaKnown RBP18.83■□□□□ 0.6
CXCL12-208ENST00000496375 NTSR2O95665 410 aa18.82■□□□□ 0.6
CXCL12-208ENST00000496375 ANXA1P04083 346 aa18.82■□□□□ 0.6
CXCL12-208ENST00000496375 NEUROD2Q15784 382 aa18.82■□□□□ 0.6
CXCL12-208ENST00000496375 PROSER3Q2NL68 480 aa18.82■□□□□ 0.6
CXCL12-208ENST00000496375 SYNE4Q8N205 404 aa18.82■□□□□ 0.6
CXCL12-208ENST00000496375 ZNF541Q9H0D2 1346 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms