RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
UBP1-213ENST00000496310 NPHP1O15259 732 aa9.73□□□□□ -0.85
UBP1-213ENST00000496310 A1BGP04217 495 aa9.73□□□□□ -0.85
UBP1-213ENST00000496310 PDE6BP35913 854 aa9.73□□□□□ -0.85
UBP1-213ENST00000496310 EIF5P55010 431 aaKnown RBP9.73□□□□□ -0.85
UBP1-213ENST00000496310 MTHFSDQ2M296 383 aaKnown RBP9.73□□□□□ -0.85
UBP1-213ENST00000496310 BRIP1Q9BX63 1249 aa9.73□□□□□ -0.85
UBP1-213ENST00000496310 POLR2AP24928 1970 aaKnown RBP9.73□□□□□ -0.85
UBP1-213ENST00000496310 MRC1P22897 1456 aa9.72□□□□□ -0.85
UBP1-213ENST00000496310 DEFB115Q30KQ5 88 aa9.72□□□□□ -0.85
UBP1-213ENST00000496310 ABT1Q9ULW3 272 aaKnown RBP9.72□□□□□ -0.85
UBP1-213ENST00000496310 LTBP1Q14766 1721 aa9.72□□□□□ -0.85
UBP1-213ENST00000496310 RNF123Q5XPI4 1314 aa9.72□□□□□ -0.85
UBP1-213ENST00000496310 FAM177BA6PVY3 158 aa9.71□□□□□ -0.86
UBP1-213ENST00000496310 KCNQ3O43525 872 aa9.71□□□□□ -0.86
UBP1-213ENST00000496310 SRGNP10124 158 aa9.71□□□□□ -0.86
UBP1-213ENST00000496310 EPHX2P34913 555 aa9.71□□□□□ -0.86
UBP1-213ENST00000496310 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
UBP1-213ENST00000496310 CNTROBQ8N137 903 aa9.71□□□□□ -0.86
UBP1-213ENST00000496310 CNBD1Q8NA66 436 aa9.71□□□□□ -0.86
UBP1-213ENST00000496310 CNKSR1Q969H4 720 aa9.71□□□□□ -0.86
UBP1-213ENST00000496310 ZNF496Q96IT1 587 aaPredicted RBP9.71□□□□□ -0.86
UBP1-213ENST00000496310 CFAP44Q96MT7 982 aa9.71□□□□□ -0.86
UBP1-213ENST00000496310 SETDB2Q96T68 719 aa9.71□□□□□ -0.86
UBP1-213ENST00000496310 WDR33Q9C0J8 1336 aaKnown RBP9.71□□□□□ -0.86
UBP1-213ENST00000496310 LTBP3Q9NS15 1303 aa9.71□□□□□ -0.86
UBP1-213ENST00000496310 A0A087WZG4 1122 aa9.7□□□□□ -0.86
UBP1-213ENST00000496310 IQCA1LA6NCM1 817 aa9.7□□□□□ -0.86
UBP1-213ENST00000496310 STARD3NLO95772 234 aa9.7□□□□□ -0.86
UBP1-213ENST00000496310 CNGB1Q14028 1251 aaPredicted RBP9.7□□□□□ -0.86
UBP1-213ENST00000496310 STYK1Q6J9G0 422 aa9.7□□□□□ -0.86
UBP1-213ENST00000496310 SLC51AQ86UW1 340 aa9.7□□□□□ -0.86
UBP1-213ENST00000496310 HACL1Q9UJ83 578 aa9.7□□□□□ -0.86
UBP1-213ENST00000496310 PRAMEF22A3QJZ6 481 aa9.69□□□□□ -0.86
UBP1-213ENST00000496310 CAMTA2O94983 1202 aa9.69□□□□□ -0.86
UBP1-213ENST00000496310 ST5P78524 1137 aa9.69□□□□□ -0.86
UBP1-213ENST00000496310 MLLT1Q03111 559 aaPredicted RBP9.69□□□□□ -0.86
UBP1-213ENST00000496310 PDE4DIPQ5VU43 2346 aa9.69□□□□□ -0.86
UBP1-213ENST00000496310 CYP4F22Q6NT55 531 aa9.69□□□□□ -0.86
UBP1-213ENST00000496310 TTC5Q8N0Z6 440 aa9.69□□□□□ -0.86
UBP1-213ENST00000496310 VSIG10Q8N0Z9 540 aa9.69□□□□□ -0.86
UBP1-213ENST00000496310 C7orf43Q8WVR3 580 aa9.69□□□□□ -0.86
UBP1-213ENST00000496310 MASTLQ96GX5 879 aa9.69□□□□□ -0.86
UBP1-213ENST00000496310 L3MBTL3Q96JM7 780 aaPredicted RBP9.69□□□□□ -0.86
UBP1-213ENST00000496310 NUP98P52948 1817 aa9.68□□□□□ -0.86
UBP1-213ENST00000496310 COL4A5P29400 1685 aa9.68□□□□□ -0.86
UBP1-213ENST00000496310 HEG1Q9ULI3 1381 aa9.68□□□□□ -0.86
UBP1-213ENST00000496310 RASSF10A6NK89 507 aa9.68□□□□□ -0.86
UBP1-213ENST00000496310 TRAF5O00463 557 aa9.68□□□□□ -0.86
UBP1-213ENST00000496310 AOC2O75106 756 aa9.68□□□□□ -0.86
UBP1-213ENST00000496310 CCDC93Q567U6 631 aa9.68□□□□□ -0.86
UBP1-213ENST00000496310 SYNE4Q8N205 404 aa9.68□□□□□ -0.86
UBP1-213ENST00000496310 IL17REQ8NFR9 667 aa9.68□□□□□ -0.86
UBP1-213ENST00000496310 GJA3Q9Y6H8 435 aa9.68□□□□□ -0.86
UBP1-213ENST00000496310 HSPA5P11021 654 aaKnown RBP9.67□□□□□ -0.86
UBP1-213ENST00000496310 FKBP4Q02790 459 aaKnown RBP eCLIP9.67□□□□□ -0.86
UBP1-213ENST00000496310 ZNF790Q6PG37 636 aa9.67□□□□□ -0.86
UBP1-213ENST00000496310 NBPF5PQ86XG9 351 aaPredicted RBP9.67□□□□□ -0.86
UBP1-213ENST00000496310 DZIP3Q86Y13 1208 aaKnown RBP9.67□□□□□ -0.86
UBP1-213ENST00000496310 CAPNS2Q96L46 248 aa9.67□□□□□ -0.86
UBP1-213ENST00000496310 PDZRN3Q9UPQ7 1066 aa9.67□□□□□ -0.86
UBP1-213ENST00000496310 USP16Q9Y5T5 823 aa9.67□□□□□ -0.86
UBP1-213ENST00000496310 TAF1P21675 1872 aa9.67□□□□□ -0.86
UBP1-213ENST00000496310 TCERG1O14776 1098 aaKnown RBP9.66□□□□□ -0.86
UBP1-213ENST00000496310 IL6STP40189 918 aaPredicted RBP9.66□□□□□ -0.86
UBP1-213ENST00000496310 IARSP41252 1262 aaKnown RBP9.66□□□□□ -0.86
UBP1-213ENST00000496310 EPS15P42566 896 aa9.66□□□□□ -0.86
UBP1-213ENST00000496310 MAP2K1Q02750 393 aaPredicted RBP9.66□□□□□ -0.86
UBP1-213ENST00000496310 DDX21Q9NR30 783 aaKnown RBP eCLIP9.66□□□□□ -0.86
UBP1-213ENST00000496310 THSD7BQ9C0I4 1608 aa9.65□□□□□ -0.86
UBP1-213ENST00000496310 NPR1P16066 1061 aa9.65□□□□□ -0.86
UBP1-213ENST00000496310 TEFQ10587 303 aa9.65□□□□□ -0.86
UBP1-213ENST00000496310 SOGA3Q5TF21 947 aa9.65□□□□□ -0.86
UBP1-213ENST00000496310 CST9Q5W186 159 aa9.65□□□□□ -0.86
UBP1-213ENST00000496310 GPR101Q96P66 508 aaPredicted RBP9.65□□□□□ -0.86
UBP1-213ENST00000496310 TNRC18O15417 2968 aaPredicted RBP9.65□□□□□ -0.87
UBP1-213ENST00000496310 AKAP11Q9UKA4 1901 aa9.64□□□□□ -0.87
UBP1-213ENST00000496310 FZD9O00144 591 aa9.64□□□□□ -0.87
UBP1-213ENST00000496310 CC2D1BQ5T0F9 858 aaKnown RBP9.64□□□□□ -0.87
UBP1-213ENST00000496310 NPM2Q86SE8 214 aaKnown RBP9.64□□□□□ -0.87
UBP1-213ENST00000496310 NIP7Q9Y221 180 aaKnown RBP eCLIP9.64□□□□□ -0.87
UBP1-213ENST00000496310 KNSTRNQ9Y448 316 aa9.64□□□□□ -0.87
UBP1-213ENST00000496310 U2SURPO15042 1029 aaKnown RBP9.63□□□□□ -0.87
UBP1-213ENST00000496310 DIAPH1O60610 1272 aaKnown RBP9.63□□□□□ -0.87
UBP1-213ENST00000496310 RGS19P49795 217 aa9.63□□□□□ -0.87
UBP1-213ENST00000496310 HLFQ16534 295 aa9.63□□□□□ -0.87
UBP1-213ENST00000496310 PNMA8AQ86V59 439 aaPredicted RBP9.63□□□□□ -0.87
UBP1-213ENST00000496310 NUTM1Q86Y26 1132 aa9.63□□□□□ -0.87
UBP1-213ENST00000496310 NGEFQ8N5V2 710 aa9.63□□□□□ -0.87
UBP1-213ENST00000496310 FMNL2Q96PY5 1086 aa9.63□□□□□ -0.87
UBP1-213ENST00000496310 BEGAINQ9BUH8 593 aa9.63□□□□□ -0.87
UBP1-213ENST00000496310 MCOLN1Q9GZU1 580 aa9.63□□□□□ -0.87
UBP1-213ENST00000496310 BTBD11A6QL63 1104 aa9.62□□□□□ -0.87
UBP1-213ENST00000496310 GNAT3A8MTJ3 354 aa9.62□□□□□ -0.87
UBP1-213ENST00000496310 NBPF26B4DH59 902 aa9.62□□□□□ -0.87
UBP1-213ENST00000496310 SCNN1DP51172 638 aa9.62□□□□□ -0.87
UBP1-213ENST00000496310 AMER1Q5JTC6 1135 aaPredicted RBP9.62□□□□□ -0.87
UBP1-213ENST00000496310 NBPF10Q6P3W6 841 aaKnown RBP9.62□□□□□ -0.87
UBP1-213ENST00000496310 DLK2Q6UY11 383 aa9.62□□□□□ -0.87
UBP1-213ENST00000496310 RTKN2Q8IZC4 609 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms