RNA–Protein interactions for RNA: ENST00000496239.5

NECAP2-207, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2

Gene NECAP2, Length 4,619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-207ENST00000496239 LMTK2Q8IWU2 1503 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 VAMP4O75379 141 aa13.16□□□□□ -0.3
NECAP2-207ENST00000496239 GLRX3O76003 335 aaKnown RBP13.16□□□□□ -0.3
NECAP2-207ENST00000496239 FOXD4L5Q5VV16 416 aaPredicted RBP13.16□□□□□ -0.3
NECAP2-207ENST00000496239 FOXD4L4Q8WXT5 416 aaPredicted RBP13.16□□□□□ -0.3
NECAP2-207ENST00000496239 SNRKQ9NRH2 765 aa13.16□□□□□ -0.3
NECAP2-207ENST00000496239 POLR3DP05423 398 aaPredicted RBP13.16□□□□□ -0.3
NECAP2-207ENST00000496239 LDHCP07864 332 aa13.16□□□□□ -0.3
NECAP2-207ENST00000496239 HCLS1P14317 486 aaPredicted RBP13.16□□□□□ -0.3
NECAP2-207ENST00000496239 CHD1LQ86WJ1 897 aa13.16□□□□□ -0.3
NECAP2-207ENST00000496239 IL17REQ8NFR9 667 aa13.16□□□□□ -0.3
NECAP2-207ENST00000496239 KCNQ4P56696 695 aa13.16□□□□□ -0.3
NECAP2-207ENST00000496239 IQSEC3Q9UPP2 1182 aaPredicted RBP13.16□□□□□ -0.3
NECAP2-207ENST00000496239 TNS3Q68CZ2 1445 aa13.15□□□□□ -0.3
NECAP2-207ENST00000496239 PSMA5P28066 241 aa13.15□□□□□ -0.3
NECAP2-207ENST00000496239 MEIS3Q99687 375 aa13.15□□□□□ -0.3
NECAP2-207ENST00000496239 SMARCA5O60264 1052 aaPredicted RBP13.14□□□□□ -0.31
NECAP2-207ENST00000496239 C16orf71Q8IYS4 520 aaPredicted RBP13.14□□□□□ -0.31
NECAP2-207ENST00000496239 PLBD2Q8NHP8 589 aa13.14□□□□□ -0.31
NECAP2-207ENST00000496239 UNC13BO14795 1591 aa13.14□□□□□ -0.31
NECAP2-207ENST00000496239 CHL1O00533 1208 aa13.14□□□□□ -0.31
NECAP2-207ENST00000496239 MYO1BO43795 1136 aa13.14□□□□□ -0.31
NECAP2-207ENST00000496239 HOXB7P09629 217 aa13.14□□□□□ -0.31
NECAP2-207ENST00000496239 USP16Q9Y5T5 823 aa13.14□□□□□ -0.31
NECAP2-207ENST00000496239 ARHGAP45Q92619 1136 aa13.14□□□□□ -0.31
NECAP2-207ENST00000496239 EYA3Q99504 573 aa13.14□□□□□ -0.31
NECAP2-207ENST00000496239 AATKQ6ZMQ8 1374 aa13.14□□□□□ -0.31
NECAP2-207ENST00000496239 ATP2B3Q16720 1220 aa13.14□□□□□ -0.31
NECAP2-207ENST00000496239 NLGN1Q8N2Q7 840 aa13.14□□□□□ -0.31
NECAP2-207ENST00000496239 HELBQ8NG08 1087 aaPredicted RBP13.14□□□□□ -0.31
NECAP2-207ENST00000496239 RIMBP2O15034 1052 aa13.13□□□□□ -0.31
NECAP2-207ENST00000496239 RBM17Q96I25 401 aaKnown RBP13.13□□□□□ -0.31
NECAP2-207ENST00000496239 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
NECAP2-207ENST00000496239 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
NECAP2-207ENST00000496239 F8W031 263 aaPredicted RBP13.13□□□□□ -0.31
NECAP2-207ENST00000496239 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
NECAP2-207ENST00000496239 MINDY4BA8MYZ0 360 aa13.13□□□□□ -0.31
NECAP2-207ENST00000496239 SAFBQ15424 915 aaKnown RBP eCLIP13.13□□□□□ -0.31
NECAP2-207ENST00000496239 BCS1LQ9Y276 419 aa13.13□□□□□ -0.31
NECAP2-207ENST00000496239 RTL1A6NKG5 1358 aa13.13□□□□□ -0.31
NECAP2-207ENST00000496239 MPHOSPH10O00566 681 aaKnown RBP13.12□□□□□ -0.31
NECAP2-207ENST00000496239 C20orf194Q5TEA3 1177 aa13.12□□□□□ -0.31
NECAP2-207ENST00000496239 GBP4Q96PP9 640 aa13.12□□□□□ -0.31
NECAP2-207ENST00000496239 CTNNA3Q9UI47 895 aa13.12□□□□□ -0.31
NECAP2-207ENST00000496239 CEP170BQ9Y4F5 1589 aaPredicted RBP13.12□□□□□ -0.31
NECAP2-207ENST00000496239 KCNQ3O43525 872 aa13.12□□□□□ -0.31
NECAP2-207ENST00000496239 MX1P20591 662 aa13.12□□□□□ -0.31
NECAP2-207ENST00000496239 RBM26Q5T8P6 1007 aaKnown RBP13.12□□□□□ -0.31
NECAP2-207ENST00000496239 CWC27Q6UX04 472 aaKnown RBP13.12□□□□□ -0.31
NECAP2-207ENST00000496239 EIF4A1P60842 406 aaKnown RBP13.12□□□□□ -0.31
NECAP2-207ENST00000496239 SPTY2D1Q68D10 685 aaPredicted RBP13.12□□□□□ -0.31
NECAP2-207ENST00000496239 MRPL50Q8N5N7 158 aaKnown RBP13.12□□□□□ -0.31
NECAP2-207ENST00000496239 ANO8Q9HCE9 1232 aaPredicted RBP13.12□□□□□ -0.31
NECAP2-207ENST00000496239 ZMYM4Q5VZL5 1548 aa13.12□□□□□ -0.31
NECAP2-207ENST00000496239 IGSF1Q8N6C5 1336 aa13.12□□□□□ -0.31
NECAP2-207ENST00000496239 PTMAP06454 111 aaKnown RBP13.11□□□□□ -0.31
NECAP2-207ENST00000496239 GRM1Q13255 1194 aa13.11□□□□□ -0.31
NECAP2-207ENST00000496239 FOXD4L6Q3SYB3 417 aaPredicted RBP13.11□□□□□ -0.31
NECAP2-207ENST00000496239 FOXD4L3Q6VB84 417 aaPredicted RBP13.11□□□□□ -0.31
NECAP2-207ENST00000496239 MKNK2Q9HBH9 465 aa13.11□□□□□ -0.31
NECAP2-207ENST00000496239 KDM4AO75164 1064 aa13.11□□□□□ -0.31
NECAP2-207ENST00000496239 ZNF287Q9HBT7 754 aa13.11□□□□□ -0.31
NECAP2-207ENST00000496239 ADAMTS13Q76LX8 1427 aa13.11□□□□□ -0.31
NECAP2-207ENST00000496239 BAG3O95817 575 aa13.11□□□□□ -0.31
NECAP2-207ENST00000496239 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
NECAP2-207ENST00000496239 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
NECAP2-207ENST00000496239 MADDQ8WXG6 1647 aa13.1□□□□□ -0.31
NECAP2-207ENST00000496239 IL15P40933 162 aaPredicted RBP13.1□□□□□ -0.31
NECAP2-207ENST00000496239 CCDC191Q8NCU4 936 aa13.1□□□□□ -0.31
NECAP2-207ENST00000496239 UBAC1Q9BSL1 405 aa13.1□□□□□ -0.31
NECAP2-207ENST00000496239 NOP58Q9Y2X3 529 aaKnown RBP13.1□□□□□ -0.31
NECAP2-207ENST00000496239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
NECAP2-207ENST00000496239 UQCRFS1P1P0C7P4 283 aa13.1□□□□□ -0.31
NECAP2-207ENST00000496239 FOSBP53539 338 aa13.1□□□□□ -0.31
NECAP2-207ENST00000496239 NAPBQ9H115 298 aa13.1□□□□□ -0.31
NECAP2-207ENST00000496239 GJA3Q9Y6H8 435 aa13.1□□□□□ -0.31
NECAP2-207ENST00000496239 GIGYF1O75420 1035 aaPredicted RBP13.1□□□□□ -0.31
NECAP2-207ENST00000496239 XBP1P17861 261 aa13.1□□□□□ -0.31
NECAP2-207ENST00000496239 G2E3Q7L622 706 aa13.1□□□□□ -0.31
NECAP2-207ENST00000496239 ZNF804AQ7Z570 1209 aa13.1□□□□□ -0.31
NECAP2-207ENST00000496239 PPRC1Q5VV67 1664 aaKnown RBP13.1□□□□□ -0.31
NECAP2-207ENST00000496239 KIF24Q5T7B8 1368 aa13.1□□□□□ -0.31
NECAP2-207ENST00000496239 SPHKAPQ2M3C7 1700 aa13.1□□□□□ -0.31
NECAP2-207ENST00000496239 LMOD1P29536 600 aaPredicted RBP13.09□□□□□ -0.31
NECAP2-207ENST00000496239 CRKLP46109 303 aaKnown RBP13.09□□□□□ -0.31
NECAP2-207ENST00000496239 METTL22Q9BUU2 404 aaPredicted RBP13.09□□□□□ -0.31
NECAP2-207ENST00000496239 GOLIM4O00461 696 aa13.09□□□□□ -0.31
NECAP2-207ENST00000496239 USPL1Q5W0Q7 1092 aa13.09□□□□□ -0.31
NECAP2-207ENST00000496239 ECHDC1Q9NTX5 307 aa13.09□□□□□ -0.31
NECAP2-207ENST00000496239 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
NECAP2-207ENST00000496239 ANKRD2Q9GZV1 360 aa13.09□□□□□ -0.31
NECAP2-207ENST00000496239 LARGE2Q8N3Y3 721 aa13.09□□□□□ -0.31
NECAP2-207ENST00000496239 C22orf23Q9BZE7 217 aa13.09□□□□□ -0.31
NECAP2-207ENST00000496239 PTCH1Q13635 1447 aa13.09□□□□□ -0.31
NECAP2-207ENST00000496239 KDM5AP29375 1690 aaKnown RBP13.08□□□□□ -0.31
NECAP2-207ENST00000496239 SMC3Q9UQE7 1217 aa13.08□□□□□ -0.31
NECAP2-207ENST00000496239 CSPP1Q1MSJ5 1256 aa13.08□□□□□ -0.32
NECAP2-207ENST00000496239 NUP133Q8WUM0 1156 aa13.08□□□□□ -0.32
NECAP2-207ENST00000496239 PIGBQ92521 554 aa13.08□□□□□ -0.32
NECAP2-207ENST00000496239 ZBTB1Q9Y2K1 713 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms