RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 USP5P45974 858 aa9.08□□□□□ -0.96
SSR3-208ENST00000496050 LYSMD3Q7Z3D4 306 aa9.08□□□□□ -0.96
SSR3-208ENST00000496050 NEUROD4Q9HD90 331 aa9.08□□□□□ -0.96
SSR3-208ENST00000496050 CCDC87Q9NVE4 849 aa9.08□□□□□ -0.96
SSR3-208ENST00000496050 ANKIB1Q9P2G1 1089 aa9.08□□□□□ -0.96
SSR3-208ENST00000496050 GPC6Q9Y625 555 aaPredicted RBP9.08□□□□□ -0.96
SSR3-208ENST00000496050 PCSK2P16519 638 aa9.07□□□□□ -0.96
SSR3-208ENST00000496050 ZNF16P17020 682 aaPredicted RBP9.07□□□□□ -0.96
SSR3-208ENST00000496050 PLCB3Q01970 1234 aa9.07□□□□□ -0.96
SSR3-208ENST00000496050 NBPF10Q6P3W6 841 aaKnown RBP9.07□□□□□ -0.96
SSR3-208ENST00000496050 RHPN1Q8TCX5 695 aa9.07□□□□□ -0.96
SSR3-208ENST00000496050 GIPC2Q8TF65 315 aa9.07□□□□□ -0.96
SSR3-208ENST00000496050 FAM13BQ9NYF5 915 aa9.07□□□□□ -0.96
SSR3-208ENST00000496050 TTLL8A6PVC2 850 aa9.06□□□□□ -0.96
SSR3-208ENST00000496050 MZF1P28698 734 aaPredicted RBP9.06□□□□□ -0.96
SSR3-208ENST00000496050 ZAP70P43403 619 aa9.06□□□□□ -0.96
SSR3-208ENST00000496050 CTC1Q2NKJ3 1217 aa9.06□□□□□ -0.96
SSR3-208ENST00000496050 TMC7Q7Z402 723 aa9.06□□□□□ -0.96
SSR3-208ENST00000496050 ETFBKMTQ8IXQ9 262 aa9.06□□□□□ -0.96
SSR3-208ENST00000496050 TTC16Q8NEE8 873 aa9.06□□□□□ -0.96
SSR3-208ENST00000496050 RNF217Q8TC41 542 aa9.06□□□□□ -0.96
SSR3-208ENST00000496050 C7orf43Q8WVR3 580 aa9.06□□□□□ -0.96
SSR3-208ENST00000496050 DMRTB1Q96MA1 342 aa9.06□□□□□ -0.96
SSR3-208ENST00000496050 BCL11AQ9H165 835 aa9.06□□□□□ -0.96
SSR3-208ENST00000496050 DGAT1O75907 488 aa9.05□□□□□ -0.96
SSR3-208ENST00000496050 EAPPQ56P03 285 aaPredicted RBP9.05□□□□□ -0.96
SSR3-208ENST00000496050 BICDL1Q6ZP65 573 aa9.05□□□□□ -0.96
SSR3-208ENST00000496050 TREML1Q86YW5 311 aa9.05□□□□□ -0.96
SSR3-208ENST00000496050 MICAL2O94851 1124 aa9.04□□□□□ -0.96
SSR3-208ENST00000496050 RPLP1P05386 114 aaKnown RBP9.04□□□□□ -0.96
SSR3-208ENST00000496050 SMCPP49901 116 aaPredicted RBP9.04□□□□□ -0.96
SSR3-208ENST00000496050 DNM1Q05193 864 aaKnown RBP9.04□□□□□ -0.96
SSR3-208ENST00000496050 FAM26DQ5JW98 314 aa9.04□□□□□ -0.96
SSR3-208ENST00000496050 ATCAYQ86WG3 371 aa9.04□□□□□ -0.96
SSR3-208ENST00000496050 TIMMDC1Q9NPL8 285 aa9.04□□□□□ -0.96
SSR3-208ENST00000496050 A0A1B0GTH6 734 aa9.03□□□□□ -0.96
SSR3-208ENST00000496050 FIGNL2A6NMB9 653 aa9.03□□□□□ -0.96
SSR3-208ENST00000496050 TGFBR3LH3BV60 316 aa9.03□□□□□ -0.96
SSR3-208ENST00000496050 FGD1P98174 961 aa9.03□□□□□ -0.96
SSR3-208ENST00000496050 PKDCCQ504Y2 493 aa9.03□□□□□ -0.96
SSR3-208ENST00000496050 ARSJQ5FYB0 599 aaPredicted RBP9.03□□□□□ -0.96
SSR3-208ENST00000496050 PIK3R5Q8WYR1 880 aa9.03□□□□□ -0.96
SSR3-208ENST00000496050 EDEM1Q92611 657 aa9.03□□□□□ -0.96
SSR3-208ENST00000496050 SUSD3Q96L08 255 aa9.03□□□□□ -0.96
SSR3-208ENST00000496050 POLIQ9UNA4 740 aa9.03□□□□□ -0.96
SSR3-208ENST00000496050 UNCXA6NJT0 531 aa9.02□□□□□ -0.97
SSR3-208ENST00000496050 TREHO43280 583 aa9.02□□□□□ -0.97
SSR3-208ENST00000496050 IER5Q5VY09 327 aa9.02□□□□□ -0.97
SSR3-208ENST00000496050 FBXO33Q7Z6M2 555 aa9.02□□□□□ -0.97
SSR3-208ENST00000496050 BCS1LQ9Y276 419 aa9.02□□□□□ -0.97
SSR3-208ENST00000496050 SOS2Q07890 1332 aaPredicted RBP9.02□□□□□ -0.97
SSR3-208ENST00000496050 AXIN1O15169 862 aa9.01□□□□□ -0.97
SSR3-208ENST00000496050 GFRA3O60609 400 aa9.01□□□□□ -0.97
SSR3-208ENST00000496050 PDGFAP04085 211 aa9.01□□□□□ -0.97
SSR3-208ENST00000496050 RHOQP17081 205 aa9.01□□□□□ -0.97
SSR3-208ENST00000496050 EHHADHQ08426 723 aa9.01□□□□□ -0.97
SSR3-208ENST00000496050 GPR152Q8TDT2 470 aa9.01□□□□□ -0.97
SSR3-208ENST00000496050 ZIC5Q96T25 663 aa9.01□□□□□ -0.97
SSR3-208ENST00000496050 FAM129BQ96TA1 746 aa9.01□□□□□ -0.97
SSR3-208ENST00000496050 NEFLP07196 543 aa9□□□□□ -0.97
SSR3-208ENST00000496050 MSX1P28360 303 aa9□□□□□ -0.97
SSR3-208ENST00000496050 DSC3Q14574 896 aa9□□□□□ -0.97
SSR3-208ENST00000496050 MRRFQ96E11 262 aaKnown RBP9□□□□□ -0.97
SSR3-208ENST00000496050 GJA3Q9Y6H8 435 aa9□□□□□ -0.97
SSR3-208ENST00000496050 NRG2O14511 850 aaPredicted RBP8.99□□□□□ -0.97
SSR3-208ENST00000496050 OPLAHO14841 1288 aa8.99□□□□□ -0.97
SSR3-208ENST00000496050 TRIM46Q7Z4K8 759 aa8.99□□□□□ -0.97
SSR3-208ENST00000496050 GJD3Q8N144 294 aa8.99□□□□□ -0.97
SSR3-208ENST00000496050 ZNF280CQ8ND82 737 aa8.99□□□□□ -0.97
SSR3-208ENST00000496050 ZFP42Q96MM3 310 aa8.99□□□□□ -0.97
SSR3-208ENST00000496050 NIF3L1Q9GZT8 377 aa8.99□□□□□ -0.97
SSR3-208ENST00000496050 DMGDHQ9UI17 866 aaKnown RBP8.99□□□□□ -0.97
SSR3-208ENST00000496050 P4HBP07237 508 aaKnown RBP8.98□□□□□ -0.97
SSR3-208ENST00000496050 BMP1P13497 986 aa8.98□□□□□ -0.97
SSR3-208ENST00000496050 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.98□□□□□ -0.97
SSR3-208ENST00000496050 C8orf34Q49A92 452 aa8.98□□□□□ -0.97
SSR3-208ENST00000496050 LRRC69Q6ZNQ3 347 aa8.98□□□□□ -0.97
SSR3-208ENST00000496050 ALKBH8Q96BT7 664 aaKnown RBP8.98□□□□□ -0.97
SSR3-208ENST00000496050 NUDT16Q96DE0 195 aaKnown RBP8.98□□□□□ -0.97
SSR3-208ENST00000496050 FNDC3AQ9Y2H6 1198 aaKnown RBP8.98□□□□□ -0.97
SSR3-208ENST00000496050 DYRK1BQ9Y463 629 aa8.98□□□□□ -0.97
SSR3-208ENST00000496050 A0A1W2PNR3 127 aa8.97□□□□□ -0.97
SSR3-208ENST00000496050 F11P03951 625 aa8.97□□□□□ -0.97
SSR3-208ENST00000496050 ATP4AP20648 1035 aa8.97□□□□□ -0.97
SSR3-208ENST00000496050 MAPK8P45983 427 aa8.97□□□□□ -0.97
SSR3-208ENST00000496050 IDH3AP50213 366 aa8.97□□□□□ -0.97
SSR3-208ENST00000496050 FMR1Q06787 632 aaKnown RBP eCLIP8.97□□□□□ -0.97
SSR3-208ENST00000496050 LAPTM4AQ15012 233 aa8.97□□□□□ -0.97
SSR3-208ENST00000496050 CRIPAKQ8N1N5 446 aa8.97□□□□□ -0.97
SSR3-208ENST00000496050 PGBD3Q8N328 593 aa8.97□□□□□ -0.97
SSR3-208ENST00000496050 HSH2DQ96JZ2 352 aa8.97□□□□□ -0.97
SSR3-208ENST00000496050 IGHA2P01877 340 aa8.96□□□□□ -0.98
SSR3-208ENST00000496050 LDHBP07195 334 aaKnown RBP8.96□□□□□ -0.98
SSR3-208ENST00000496050 ARSDP51689 593 aa8.96□□□□□ -0.98
SSR3-208ENST00000496050 ATP2B2Q01814 1243 aa8.96□□□□□ -0.98
SSR3-208ENST00000496050 TAGLNQ01995 201 aaKnown RBP8.96□□□□□ -0.98
SSR3-208ENST00000496050 BTLAQ7Z6A9 289 aa8.96□□□□□ -0.98
SSR3-208ENST00000496050 GGNBP2Q9H3C7 697 aa8.96□□□□□ -0.98
SSR3-208ENST00000496050 KIAA1522Q9P206 1035 aaPredicted RBP8.96□□□□□ -0.98
SSR3-208ENST00000496050 GPR182O15218 404 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms