RNA–Protein interactions for RNA: ENST00000495888.1

SPOCK2-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

TSL 1 (best)

Gene SPOCK2, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-208ENST00000495888 TRIM27P14373 513 aa26.38■■□□□ 1.81
SPOCK2-208ENST00000495888 YBX3P16989 372 aaKnown RBP eCLIP26.38■■□□□ 1.81
SPOCK2-208ENST00000495888 PELP1Q8IZL8 1130 aaKnown RBP26.38■■□□□ 1.81
SPOCK2-208ENST00000495888 AK7Q96M32 723 aa26.38■■□□□ 1.81
SPOCK2-208ENST00000495888 COL5A3P25940 1745 aaPredicted RBP26.38■■□□□ 1.81
SPOCK2-208ENST00000495888 ANXA1P04083 346 aa26.36■■□□□ 1.81
SPOCK2-208ENST00000495888 PHAXQ9H814 394 aaKnown RBP26.36■■□□□ 1.81
SPOCK2-208ENST00000495888 CD2APQ9Y5K6 639 aa26.36■■□□□ 1.81
SPOCK2-208ENST00000495888 CNTNAP4Q9C0A0 1308 aa26.36■■□□□ 1.81
SPOCK2-208ENST00000495888 RC3H1Q5TC82 1133 aaKnown RBP26.35■■□□□ 1.81
SPOCK2-208ENST00000495888 INTS5Q6P9B9 1019 aaKnown RBP26.35■■□□□ 1.81
SPOCK2-208ENST00000495888 LINC00116Q8NCU8 138 aa26.35■■□□□ 1.81
SPOCK2-208ENST00000495888 CCDC87Q9NVE4 849 aa26.35■■□□□ 1.81
SPOCK2-208ENST00000495888 NEFLP07196 543 aa26.34■■□□□ 1.81
SPOCK2-208ENST00000495888 CRKLP46109 303 aaKnown RBP26.34■■□□□ 1.81
SPOCK2-208ENST00000495888 ABCC4O15439 1325 aa26.34■■□□□ 1.81
SPOCK2-208ENST00000495888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.33■■□□□ 1.81
SPOCK2-208ENST00000495888 GRIN3BO60391 1043 aa26.33■■□□□ 1.81
SPOCK2-208ENST00000495888 MYL6BP14649 208 aa26.33■■□□□ 1.81
SPOCK2-208ENST00000495888 SSFA2P28290 1259 aa26.33■■□□□ 1.81
SPOCK2-208ENST00000495888 FKBP5Q13451 457 aaPredicted RBP26.33■■□□□ 1.81
SPOCK2-208ENST00000495888 DZIP1LQ8IYY4 767 aaKnown RBP26.33■■□□□ 1.81
SPOCK2-208ENST00000495888 ZBTB1Q9Y2K1 713 aa26.33■■□□□ 1.81
SPOCK2-208ENST00000495888 IL6STP40189 918 aaPredicted RBP26.32■■□□□ 1.8
SPOCK2-208ENST00000495888 C20orf194Q5TEA3 1177 aa26.32■■□□□ 1.8
SPOCK2-208ENST00000495888 SMIM5Q71RC9 77 aa26.32■■□□□ 1.8
SPOCK2-208ENST00000495888 RLBP1P12271 317 aa26.31■■□□□ 1.8
SPOCK2-208ENST00000495888 C1QTNF8P60827 252 aa26.31■■□□□ 1.8
SPOCK2-208ENST00000495888 FTSJ3Q8IY81 847 aaKnown RBP26.31■■□□□ 1.8
SPOCK2-208ENST00000495888 XAGE3Q8WTP9 111 aa26.31■■□□□ 1.8
SPOCK2-208ENST00000495888 TNNQ9UQP3 1299 aa26.31■■□□□ 1.8
SPOCK2-208ENST00000495888 PHF14O94880 888 aa26.3■■□□□ 1.8
SPOCK2-208ENST00000495888 DDX58O95786 925 aaKnown RBP26.3■■□□□ 1.8
SPOCK2-208ENST00000495888 PIP4K2AP48426 406 aaPredicted RBP26.3■■□□□ 1.8
SPOCK2-208ENST00000495888 COPS6Q7L5N1 327 aa26.3■■□□□ 1.8
SPOCK2-208ENST00000495888 EIF5P55010 431 aaKnown RBP26.29■■□□□ 1.8
SPOCK2-208ENST00000495888 PANK1Q8TE04 598 aa26.29■■□□□ 1.8
SPOCK2-208ENST00000495888 MYH14Q7Z406 1995 aaKnown RBP26.28■■□□□ 1.8
SPOCK2-208ENST00000495888 KSR2Q6VAB6 950 aa26.28■■□□□ 1.8
SPOCK2-208ENST00000495888 CLUAP1Q96AJ1 413 aa26.28■■□□□ 1.8
SPOCK2-208ENST00000495888 ADCY9O60503 1353 aa26.28■■□□□ 1.8
SPOCK2-208ENST00000495888 PXDNLA1KZ92 1463 aa26.28■■□□□ 1.8
SPOCK2-208ENST00000495888 PI4KAP2A4QPH2 592 aa26.26■■□□□ 1.79
SPOCK2-208ENST00000495888 INTS3Q68E01 1043 aaKnown RBP26.26■■□□□ 1.79
SPOCK2-208ENST00000495888 PI4KAP1Q8N8J0 262 aa26.26■■□□□ 1.79
SPOCK2-208ENST00000495888 GNPATO15228 680 aa26.25■■□□□ 1.79
SPOCK2-208ENST00000495888 IRX6P78412 446 aaPredicted RBP26.25■■□□□ 1.79
SPOCK2-208ENST00000495888 AIMP1Q12904 312 aaKnown RBP26.25■■□□□ 1.79
SPOCK2-208ENST00000495888 ERICH6BQ5W0A0 696 aa26.25■■□□□ 1.79
SPOCK2-208ENST00000495888 ANKRD13DQ6ZTN6 518 aa26.25■■□□□ 1.79
SPOCK2-208ENST00000495888 PLBD2Q8NHP8 589 aa26.25■■□□□ 1.79
SPOCK2-208ENST00000495888 DNAAF4Q8WXU2 420 aa26.25■■□□□ 1.79
SPOCK2-208ENST00000495888 F6X3S4 739 aa26.24■■□□□ 1.79
SPOCK2-208ENST00000495888 RPS6KA4O75676 772 aa26.24■■□□□ 1.79
SPOCK2-208ENST00000495888 MVPQ14764 893 aaKnown RBP26.24■■□□□ 1.79
SPOCK2-208ENST00000495888 TTLL7Q6ZT98 887 aa26.24■■□□□ 1.79
SPOCK2-208ENST00000495888 TMEM57Q8N5G2 664 aa26.24■■□□□ 1.79
SPOCK2-208ENST00000495888 ATP10DQ9P241 1426 aa26.23■■□□□ 1.79
SPOCK2-208ENST00000495888 CCT4P50991 539 aaKnown RBP26.23■■□□□ 1.79
SPOCK2-208ENST00000495888 CRBNQ96SW2 442 aa26.23■■□□□ 1.79
SPOCK2-208ENST00000495888 IBTKQ9P2D0 1353 aaPredicted RBP26.22■■□□□ 1.79
SPOCK2-208ENST00000495888 FKBP8Q14318 412 aa26.22■■□□□ 1.79
SPOCK2-208ENST00000495888 MAP3K2Q9Y2U5 619 aa26.22■■□□□ 1.79
SPOCK2-208ENST00000495888 COG6Q9Y2V7 657 aa26.22■■□□□ 1.79
SPOCK2-208ENST00000495888 N4BP2Q86UW6 1770 aaPredicted RBP26.21■■□□□ 1.79
SPOCK2-208ENST00000495888 A0A087WZG4 1122 aa26.21■■□□□ 1.79
SPOCK2-208ENST00000495888 KIF6Q6ZMV9 814 aa26.21■■□□□ 1.79
SPOCK2-208ENST00000495888 RIC3Q7Z5B4 369 aa26.21■■□□□ 1.79
SPOCK2-208ENST00000495888 NPM2Q86SE8 214 aaKnown RBP26.21■■□□□ 1.79
SPOCK2-208ENST00000495888 COL15A1P39059 1388 aa26.2■■□□□ 1.79
SPOCK2-208ENST00000495888 MAP3K15Q6ZN16 1313 aa26.2■■□□□ 1.79
SPOCK2-208ENST00000495888 ERVV-1B6SEH8 477 aa26.2■■□□□ 1.78
SPOCK2-208ENST00000495888 KIF13BQ9NQT8 1826 aa26.19■■□□□ 1.78
SPOCK2-208ENST00000495888 RGL2O15211 777 aa26.19■■□□□ 1.78
SPOCK2-208ENST00000495888 METTL22Q9BUU2 404 aaPredicted RBP26.19■■□□□ 1.78
SPOCK2-208ENST00000495888 DDX19BQ9UMR2 479 aa26.19■■□□□ 1.78
SPOCK2-208ENST00000495888 RTCBQ9Y3I0 505 aaKnown RBP26.19■■□□□ 1.78
SPOCK2-208ENST00000495888 KIAA1551Q9HCM1 1747 aa26.19■■□□□ 1.78
SPOCK2-208ENST00000495888 ADRA2BP18089 450 aa26.18■■□□□ 1.78
SPOCK2-208ENST00000495888 AAMPQ13685 434 aa26.18■■□□□ 1.78
SPOCK2-208ENST00000495888 BEND3Q5T5X7 828 aa26.18■■□□□ 1.78
SPOCK2-208ENST00000495888 SLC4A10Q6U841 1118 aa26.18■■□□□ 1.78
SPOCK2-208ENST00000495888 ITPRIPQ8IWB1 547 aa26.18■■□□□ 1.78
SPOCK2-208ENST00000495888 EXOC6Q8TAG9 804 aa26.18■■□□□ 1.78
SPOCK2-208ENST00000495888 ZNF330Q9Y3S2 320 aaPredicted RBP26.18■■□□□ 1.78
SPOCK2-208ENST00000495888 DZIP3Q86Y13 1208 aaKnown RBP26.17■■□□□ 1.78
SPOCK2-208ENST00000495888 LINS1Q8NG48 757 aa26.17■■□□□ 1.78
SPOCK2-208ENST00000495888 ARFGEF2Q9Y6D5 1785 aa26.16■■□□□ 1.78
SPOCK2-208ENST00000495888 ALDH1L1O75891 902 aa26.16■■□□□ 1.78
SPOCK2-208ENST00000495888 SRCIN1Q9C0H9 1055 aa26.16■■□□□ 1.78
SPOCK2-208ENST00000495888 CHMP4BQ9H444 224 aaKnown RBP26.16■■□□□ 1.78
SPOCK2-208ENST00000495888 C4AP0C0L4 1744 aa26.15■■□□□ 1.78
SPOCK2-208ENST00000495888 NEXNQ0ZGT2 675 aa26.15■■□□□ 1.78
SPOCK2-208ENST00000495888 ZBTB3Q9H5J0 574 aa26.15■■□□□ 1.78
SPOCK2-208ENST00000495888 CAMTA2O94983 1202 aa26.14■■□□□ 1.78
SPOCK2-208ENST00000495888 MMP10P09238 476 aa26.14■■□□□ 1.78
SPOCK2-208ENST00000495888 GIGYF2Q6Y7W6 1299 aaKnown RBP26.14■■□□□ 1.78
SPOCK2-208ENST00000495888 ZBTB7BO15156 539 aaPredicted RBP26.13■■□□□ 1.77
SPOCK2-208ENST00000495888 TRAPPC3LQ5T215 181 aa26.13■■□□□ 1.77
SPOCK2-208ENST00000495888 TBC1D2BQ9UPU7 963 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms