RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 PPP4R2Q9NY27 417 aa19.84■□□□□ 0.77
PHF1-211ENST00000495509 TBC1D2BQ9UPU7 963 aa19.83■□□□□ 0.77
PHF1-211ENST00000495509 CNTNAP4Q9C0A0 1308 aa19.83■□□□□ 0.77
PHF1-211ENST00000495509 CWF19L2Q2TBE0 894 aaKnown RBP19.83■□□□□ 0.76
PHF1-211ENST00000495509 SLC27A3Q5K4L6 730 aa19.83■□□□□ 0.76
PHF1-211ENST00000495509 RC3H1Q5TC82 1133 aaKnown RBP19.83■□□□□ 0.76
PHF1-211ENST00000495509 AMIGO3Q86WK7 504 aa19.83■□□□□ 0.76
PHF1-211ENST00000495509 METTL22Q9BUU2 404 aaPredicted RBP19.83■□□□□ 0.76
PHF1-211ENST00000495509 ZBTB40Q9NUA8 1239 aa19.83■□□□□ 0.76
PHF1-211ENST00000495509 MYD88Q99836 296 aa19.82■□□□□ 0.76
PHF1-211ENST00000495509 SRCIN1Q9C0H9 1055 aa19.82■□□□□ 0.76
PHF1-211ENST00000495509 ARFGEF2Q9Y6D5 1785 aa19.81■□□□□ 0.76
PHF1-211ENST00000495509 IGKV5-2P06315 115 aa19.81■□□□□ 0.76
PHF1-211ENST00000495509 B4GALNT3Q6L9W6 998 aa19.81■□□□□ 0.76
PHF1-211ENST00000495509 DZIP3Q86Y13 1208 aaKnown RBP19.81■□□□□ 0.76
PHF1-211ENST00000495509 MEIS3Q99687 375 aa19.81■□□□□ 0.76
PHF1-211ENST00000495509 GNPATO15228 680 aa19.8■□□□□ 0.76
PHF1-211ENST00000495509 HLFQ16534 295 aa19.8■□□□□ 0.76
PHF1-211ENST00000495509 PXDNLA1KZ92 1463 aa19.8■□□□□ 0.76
PHF1-211ENST00000495509 C4BP0C0L5 1744 aa19.8■□□□□ 0.76
PHF1-211ENST00000495509 NUP188Q5SRE5 1749 aa19.8■□□□□ 0.76
PHF1-211ENST00000495509 ATP5J2-PTCD1G3V325 749 aa19.8■□□□□ 0.76
PHF1-211ENST00000495509 RPS6KA4O75676 772 aa19.8■□□□□ 0.76
PHF1-211ENST00000495509 KIF6Q6ZMV9 814 aa19.8■□□□□ 0.76
PHF1-211ENST00000495509 NPM2Q86SE8 214 aaKnown RBP19.8■□□□□ 0.76
PHF1-211ENST00000495509 LINS1Q8NG48 757 aa19.8■□□□□ 0.76
PHF1-211ENST00000495509 USP44Q9H0E7 712 aa19.8■□□□□ 0.76
PHF1-211ENST00000495509 PCDHB15Q9Y5E8 787 aa19.8■□□□□ 0.76
PHF1-211ENST00000495509 MAP3K15Q6ZN16 1313 aa19.8■□□□□ 0.76
PHF1-211ENST00000495509 EN1Q05925 392 aaPredicted RBP19.79■□□□□ 0.76
PHF1-211ENST00000495509 C1orf115Q9H7X2 142 aa19.79■□□□□ 0.76
PHF1-211ENST00000495509 ATP10DQ9P241 1426 aa19.79■□□□□ 0.76
PHF1-211ENST00000495509 N4BP2Q86UW6 1770 aaPredicted RBP19.79■□□□□ 0.76
PHF1-211ENST00000495509 COL15A1P39059 1388 aa19.78■□□□□ 0.76
PHF1-211ENST00000495509 NEXNQ0ZGT2 675 aa19.78■□□□□ 0.76
PHF1-211ENST00000495509 EZH2Q15910 746 aaKnown RBP19.78■□□□□ 0.76
PHF1-211ENST00000495509 NEURL1BA8MQ27 555 aa19.77■□□□□ 0.76
PHF1-211ENST00000495509 ALDH1L1O75891 902 aa19.77■□□□□ 0.76
PHF1-211ENST00000495509 CCDC136Q96JN2 1154 aa19.77■□□□□ 0.76
PHF1-211ENST00000495509 AK7Q96M32 723 aa19.77■□□□□ 0.76
PHF1-211ENST00000495509 CAMKK2Q96RR4 588 aa19.77■□□□□ 0.76
PHF1-211ENST00000495509 RTCBQ9Y3I0 505 aaKnown RBP19.77■□□□□ 0.76
PHF1-211ENST00000495509 CAMTA2O94983 1202 aa19.76■□□□□ 0.75
PHF1-211ENST00000495509 GIGYF2Q6Y7W6 1299 aaKnown RBP19.76■□□□□ 0.75
PHF1-211ENST00000495509 NUP98P52948 1817 aa19.76■□□□□ 0.75
PHF1-211ENST00000495509 PHF14O94880 888 aa19.75■□□□□ 0.75
PHF1-211ENST00000495509 NBPF7P0C2Y1 421 aaPredicted RBP19.75■□□□□ 0.75
PHF1-211ENST00000495509 TCIRG1Q13488 830 aa19.75■□□□□ 0.75
PHF1-211ENST00000495509 DEFB132Q7Z7B7 95 aa19.75■□□□□ 0.75
PHF1-211ENST00000495509 ERVV-1B6SEH8 477 aa19.75■□□□□ 0.75
PHF1-211ENST00000495509 AAMPQ13685 434 aa19.75■□□□□ 0.75
PHF1-211ENST00000495509 JARID2Q92833 1246 aaPredicted RBP19.75■□□□□ 0.75
PHF1-211ENST00000495509 ARHGEF1Q92888 912 aaKnown RBP19.75■□□□□ 0.75
PHF1-211ENST00000495509 AFDNP55196 1824 aaKnown RBP19.74■□□□□ 0.75
PHF1-211ENST00000495509 SF3B2Q13435 895 aaKnown RBP19.74■□□□□ 0.75
PHF1-211ENST00000495509 GCKRQ14397 625 aa19.74■□□□□ 0.75
PHF1-211ENST00000495509 CHMP4BQ9H444 224 aaKnown RBP19.74■□□□□ 0.75
PHF1-211ENST00000495509 ZNF827Q17R98 1081 aa19.73■□□□□ 0.75
PHF1-211ENST00000495509 ISCA1Q9BUE6 129 aa19.73■□□□□ 0.75
PHF1-211ENST00000495509 C9orf78Q9NZ63 289 aaPredicted RBP19.73■□□□□ 0.75
PHF1-211ENST00000495509 SRP68Q9UHB9 627 aaKnown RBP19.73■□□□□ 0.75
PHF1-211ENST00000495509 UBR3Q6ZT12 1888 aa19.73■□□□□ 0.75
PHF1-211ENST00000495509 A0A087WZG4 1122 aa19.72■□□□□ 0.75
PHF1-211ENST00000495509 IGHDP01880 384 aa19.72■□□□□ 0.75
PHF1-211ENST00000495509 GPTP24298 496 aa19.72■□□□□ 0.75
PHF1-211ENST00000495509 GRM8O00222 908 aa19.72■□□□□ 0.75
PHF1-211ENST00000495509 GNAI3P08754 354 aa19.72■□□□□ 0.75
PHF1-211ENST00000495509 UBTFL1P0CB47 393 aaPredicted RBP19.72■□□□□ 0.75
PHF1-211ENST00000495509 TRAPPC3LQ5T215 181 aa19.72■□□□□ 0.75
PHF1-211ENST00000495509 RGPD3A6NKT7 1758 aaPredicted RBP19.72■□□□□ 0.75
PHF1-211ENST00000495509 RGPD4Q7Z3J3 1758 aa19.72■□□□□ 0.75
PHF1-211ENST00000495509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.71■□□□□ 0.75
PHF1-211ENST00000495509 AKT1S1Q96B36 256 aa19.71■□□□□ 0.75
PHF1-211ENST00000495509 BCL2L12Q9HB09 334 aa19.71■□□□□ 0.75
PHF1-211ENST00000495509 BAG6P46379 1132 aa19.7■□□□□ 0.74
PHF1-211ENST00000495509 USPL1Q5W0Q7 1092 aa19.7■□□□□ 0.74
PHF1-211ENST00000495509 SIRT2Q8IXJ6 389 aa19.7■□□□□ 0.74
PHF1-211ENST00000495509 CWC25Q9NXE8 425 aaPredicted RBP19.7■□□□□ 0.74
PHF1-211ENST00000495509 NARFQ9UHQ1 456 aa19.7■□□□□ 0.74
PHF1-211ENST00000495509 LRRFIP2Q9Y608 721 aaKnown RBP19.7■□□□□ 0.74
PHF1-211ENST00000495509 GNAI2P04899 355 aa19.7■□□□□ 0.74
PHF1-211ENST00000495509 TRIM28Q13263 835 aaKnown RBP19.7■□□□□ 0.74
PHF1-211ENST00000495509 RTL5Q5HYW3 569 aaPredicted RBP19.7■□□□□ 0.74
PHF1-211ENST00000495509 ZNF34Q8IZ26 560 aa19.7■□□□□ 0.74
PHF1-211ENST00000495509 CCDC191Q8NCU4 936 aa19.7■□□□□ 0.74
PHF1-211ENST00000495509 UTYO14607 1347 aa19.69■□□□□ 0.74
PHF1-211ENST00000495509 RFC4P35249 363 aa19.69■□□□□ 0.74
PHF1-211ENST00000495509 TFCP2L1Q9NZI6 479 aa19.69■□□□□ 0.74
PHF1-211ENST00000495509 ZPR1O75312 459 aa19.68■□□□□ 0.74
PHF1-211ENST00000495509 HSP90AB3PQ58FF7 597 aa19.68■□□□□ 0.74
PHF1-211ENST00000495509 UBE3BQ7Z3V4 1068 aa19.68■□□□□ 0.74
PHF1-211ENST00000495509 NLRP10Q86W26 655 aa19.68■□□□□ 0.74
PHF1-211ENST00000495509 ANKRD36CQ5JPF3 1778 aa19.68■□□□□ 0.74
PHF1-211ENST00000495509 UBN2Q6ZU65 1347 aa19.68■□□□□ 0.74
PHF1-211ENST00000495509 C4AP0C0L4 1744 aa19.68■□□□□ 0.74
PHF1-211ENST00000495509 KAZALD1Q96I82 304 aa19.67■□□□□ 0.74
PHF1-211ENST00000495509 SUCLG2Q96I99 432 aa19.67■□□□□ 0.74
PHF1-211ENST00000495509 BCORQ6W2J9 1755 aa19.67■□□□□ 0.74
PHF1-211ENST00000495509 H7C1W4 665 aa19.67■□□□□ 0.74
PHF1-211ENST00000495509 SSFA2P28290 1259 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms