RNA–Protein interactions for RNA: ENST00000495354.1

ARF4-208, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 495 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-208ENST00000495354 PRELPP51888 382 aa16.25■□□□□ 0.19
ARF4-208ENST00000495354 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
ARF4-208ENST00000495354 RSPH6AQ9H0K4 717 aa16.25■□□□□ 0.19
ARF4-208ENST00000495354 ARFGEF2Q9Y6D5 1785 aa16.25■□□□□ 0.19
ARF4-208ENST00000495354 SNRPA1P09661 255 aaKnown RBP16.23■□□□□ 0.19
ARF4-208ENST00000495354 SRGNP10124 158 aa16.23■□□□□ 0.19
ARF4-208ENST00000495354 PRPF40BQ6NWY9 871 aaKnown RBP16.23■□□□□ 0.19
ARF4-208ENST00000495354 NBPF5PQ86XG9 351 aaPredicted RBP16.23■□□□□ 0.19
ARF4-208ENST00000495354 IQCA1LA6NCM1 817 aa16.22■□□□□ 0.19
ARF4-208ENST00000495354 HTATSF1O43719 755 aaKnown RBP16.22■□□□□ 0.19
ARF4-208ENST00000495354 NEFMP07197 916 aa16.22■□□□□ 0.19
ARF4-208ENST00000495354 ZNF219Q9P2Y4 722 aaPredicted RBP16.22■□□□□ 0.19
ARF4-208ENST00000495354 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
ARF4-208ENST00000495354 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.194e-6■■■■□ 19.8
ARF4-208ENST00000495354 CCDC93Q567U6 631 aa16.21■□□□□ 0.19
ARF4-208ENST00000495354 PHACTR3Q96KR7 559 aa16.21■□□□□ 0.19
ARF4-208ENST00000495354 NPR1P16066 1061 aa16.2■□□□□ 0.18
ARF4-208ENST00000495354 TPTE2Q6XPS3 522 aa16.2■□□□□ 0.18
ARF4-208ENST00000495354 CCDC24Q8N4L8 307 aa16.2■□□□□ 0.18
ARF4-208ENST00000495354 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
ARF4-208ENST00000495354 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
ARF4-208ENST00000495354 KCNQ3O43525 872 aa16.19■□□□□ 0.18
ARF4-208ENST00000495354 CHADLQ6NUI6 762 aa16.19■□□□□ 0.18
ARF4-208ENST00000495354 SLX4Q8IY92 1834 aa16.18■□□□□ 0.18
ARF4-208ENST00000495354 POTECB2RU33 542 aa16.18■□□□□ 0.18
ARF4-208ENST00000495354 TNS4Q8IZW8 715 aa16.18■□□□□ 0.18
ARF4-208ENST00000495354 CREBZFQ9NS37 354 aa16.18■□□□□ 0.18
ARF4-208ENST00000495354 NIP7Q9Y221 180 aaKnown RBP eCLIP16.18■□□□□ 0.18
ARF4-208ENST00000495354 LAMB4A4D0S4 1761 aa16.18■□□□□ 0.18
ARF4-208ENST00000495354 HSPA1AP0DMV8 641 aaKnown RBP16.17■□□□□ 0.18
ARF4-208ENST00000495354 HSPA1BP0DMV9 641 aaKnown RBP16.17■□□□□ 0.18
ARF4-208ENST00000495354 COL13A1Q5TAT6 717 aaPredicted RBP16.17■□□□□ 0.18
ARF4-208ENST00000495354 MCM10Q7L590 875 aa16.17■□□□□ 0.18
ARF4-208ENST00000495354 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
ARF4-208ENST00000495354 DDNO94850 711 aaPredicted RBP16.16■□□□□ 0.18
ARF4-208ENST00000495354 GTF2E1P29083 439 aaPredicted RBP16.16■□□□□ 0.18
ARF4-208ENST00000495354 PPP2R1AP30153 589 aa16.16■□□□□ 0.18
ARF4-208ENST00000495354 ALDH1B1P30837 517 aa16.16■□□□□ 0.18
ARF4-208ENST00000495354 FKBP4Q02790 459 aaKnown RBP eCLIP16.16■□□□□ 0.18
ARF4-208ENST00000495354 LDHDQ86WU2 507 aa16.16■□□□□ 0.18
ARF4-208ENST00000495354 RTKN2Q8IZC4 609 aa16.16■□□□□ 0.18
ARF4-208ENST00000495354 L3MBTL3Q96JM7 780 aaPredicted RBP16.16■□□□□ 0.18
ARF4-208ENST00000495354 SCN4AP35499 1836 aa16.16■□□□□ 0.18
ARF4-208ENST00000495354 KLRG2A4D1S0 409 aaPredicted RBP16.15■□□□□ 0.18
ARF4-208ENST00000495354 PIP4K2AP48426 406 aaPredicted RBP16.15■□□□□ 0.18
ARF4-208ENST00000495354 TAF7Q15545 349 aaPredicted RBP16.15■□□□□ 0.18
ARF4-208ENST00000495354 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
ARF4-208ENST00000495354 PRAMEF22A3QJZ6 481 aa16.14■□□□□ 0.17
ARF4-208ENST00000495354 C7orf43Q8WVR3 580 aa16.13■□□□□ 0.17
ARF4-208ENST00000495354 CC2D2BQ6DHV5 1058 aa16.12■□□□□ 0.17
ARF4-208ENST00000495354 KIF6Q6ZMV9 814 aa16.12■□□□□ 0.17
ARF4-208ENST00000495354 IBTKQ9P2D0 1353 aaPredicted RBP16.12■□□□□ 0.17
ARF4-208ENST00000495354 NBPF26B4DH59 902 aa16.11■□□□□ 0.17
ARF4-208ENST00000495354 ERVV-1B6SEH8 477 aa16.11■□□□□ 0.17
ARF4-208ENST00000495354 DCTN1Q14203 1278 aa16.11■□□□□ 0.17
ARF4-208ENST00000495354 GRIPAP1Q4V328 841 aa16.11■□□□□ 0.17
ARF4-208ENST00000495354 NBPF10Q6P3W6 841 aaKnown RBP16.11■□□□□ 0.17
ARF4-208ENST00000495354 NBPF15Q8N660 670 aa16.11■□□□□ 0.17
ARF4-208ENST00000495354 PNNQ9H307 717 aaKnown RBP16.11■□□□□ 0.17
ARF4-208ENST00000495354 TAF1DQ9H5J8 278 aaPredicted RBP16.11■□□□□ 0.17
ARF4-208ENST00000495354 HACL1Q9UJ83 578 aa16.11■□□□□ 0.17
ARF4-208ENST00000495354 RIC1Q4ADV7 1423 aa16.11■□□□□ 0.17
ARF4-208ENST00000495354 IARSP41252 1262 aaKnown RBP16.1■□□□□ 0.17
ARF4-208ENST00000495354 PNMA8AQ86V59 439 aaPredicted RBP16.1■□□□□ 0.17
ARF4-208ENST00000495354 JDP2Q8WYK2 163 aa16.1■□□□□ 0.17
ARF4-208ENST00000495354 PSMD1Q99460 953 aa16.1■□□□□ 0.17
ARF4-208ENST00000495354 ZNF277Q9NRM2 450 aaPredicted RBP16.1■□□□□ 0.17
ARF4-208ENST00000495354 PASKQ96RG2 1323 aa16.1■□□□□ 0.17
ARF4-208ENST00000495354 CNTNAP1P78357 1384 aa16.1■□□□□ 0.17
ARF4-208ENST00000495354 KDM3BQ7LBC6 1761 aa16.1■□□□□ 0.17
ARF4-208ENST00000495354 FAM177BA6PVY3 158 aa16.09■□□□□ 0.17
ARF4-208ENST00000495354 EAPPQ56P03 285 aaPredicted RBP16.09■□□□□ 0.17
ARF4-208ENST00000495354 MKRN1Q9UHC7 482 aaKnown RBP16.09■□□□□ 0.17
ARF4-208ENST00000495354 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
ARF4-208ENST00000495354 MAP3K15Q6ZN16 1313 aa16.09■□□□□ 0.17
ARF4-208ENST00000495354 TMEM88BA6NKF7 163 aa16.08■□□□□ 0.16
ARF4-208ENST00000495354 POTEIP0CG38 1075 aa16.08■□□□□ 0.16
ARF4-208ENST00000495354 POTEJP0CG39 1038 aa16.08■□□□□ 0.16
ARF4-208ENST00000495354 EPHX2P34913 555 aa16.08■□□□□ 0.16
ARF4-208ENST00000495354 CRY2Q49AN0 593 aa16.08■□□□□ 0.16
ARF4-208ENST00000495354 RPGRQ92834 1020 aaKnown RBP16.08■□□□□ 0.16
ARF4-208ENST00000495354 AIDAQ96BJ3 306 aa16.08■□□□□ 0.16
ARF4-208ENST00000495354 ZNF541Q9H0D2 1346 aa16.08■□□□□ 0.16
ARF4-208ENST00000495354 MAPK8IP3Q9UPT6 1336 aa16.08■□□□□ 0.16
ARF4-208ENST00000495354 FZD9O00144 591 aa16.07■□□□□ 0.16
ARF4-208ENST00000495354 CAPN15O75808 1086 aa16.07■□□□□ 0.16
ARF4-208ENST00000495354 EIF6P56537 245 aaKnown RBP16.07■□□□□ 0.16
ARF4-208ENST00000495354 HLFQ16534 295 aa16.07■□□□□ 0.16
ARF4-208ENST00000495354 GPC2Q8N158 579 aa16.07■□□□□ 0.16
ARF4-208ENST00000495354 TMX4Q9H1E5 349 aaPredicted RBP16.07■□□□□ 0.16
ARF4-208ENST00000495354 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
ARF4-208ENST00000495354 ABCC12Q96J65 1359 aa16.06■□□□□ 0.16
ARF4-208ENST00000495354 LMOD1P29536 600 aaPredicted RBP16.06■□□□□ 0.16
ARF4-208ENST00000495354 SYNE4Q8N205 404 aa16.06■□□□□ 0.16
ARF4-208ENST00000495354 DLG5Q8TDM6 1919 aa16.06■□□□□ 0.16
ARF4-208ENST00000495354 RNF123Q5XPI4 1314 aa16.05■□□□□ 0.16
ARF4-208ENST00000495354 EIF4A1P60842 406 aaKnown RBP16.05■□□□□ 0.16
ARF4-208ENST00000495354 NFE2L2Q16236 605 aa16.05■□□□□ 0.16
ARF4-208ENST00000495354 PPP1R42Q7Z4L9 355 aa16.05■□□□□ 0.16
ARF4-208ENST00000495354 NGEFQ8N5V2 710 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms