RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 UBR3Q6ZT12 1888 aa19.48■□□□□ 0.71
SHISA5-216ENST00000494854 LINC00116Q8NCU8 138 aa19.48■□□□□ 0.71
SHISA5-216ENST00000494854 AK7Q96M32 723 aa19.48■□□□□ 0.71
SHISA5-216ENST00000494854 SLC52A2Q9HAB3 445 aa19.48■□□□□ 0.71
SHISA5-216ENST00000494854 CCT4P50991 539 aaKnown RBP19.47■□□□□ 0.71
SHISA5-216ENST00000494854 MRC1P22897 1456 aa19.47■□□□□ 0.71
SHISA5-216ENST00000494854 F6X3S4 739 aa19.47■□□□□ 0.71
SHISA5-216ENST00000494854 TEFQ10587 303 aa19.47■□□□□ 0.71
SHISA5-216ENST00000494854 FLIIQ13045 1269 aa19.47■□□□□ 0.71
SHISA5-216ENST00000494854 ANKRD44Q8N8A2 993 aa19.47■□□□□ 0.71
SHISA5-216ENST00000494854 SLC4A9Q96Q91 983 aa19.47■□□□□ 0.71
SHISA5-216ENST00000494854 ARXQ96QS3 562 aa19.47■□□□□ 0.71
SHISA5-216ENST00000494854 SIPA1L3O60292 1781 aaPredicted RBP19.46■□□□□ 0.71
SHISA5-216ENST00000494854 SLC4A10Q6U841 1118 aa19.46■□□□□ 0.71
SHISA5-216ENST00000494854 RPAP2Q8IXW5 612 aaPredicted RBP19.46■□□□□ 0.71
SHISA5-216ENST00000494854 NECTIN2Q92692 538 aa19.46■□□□□ 0.71
SHISA5-216ENST00000494854 MEIS3Q99687 375 aa19.46■□□□□ 0.71
SHISA5-216ENST00000494854 RBM42Q9BTD8 480 aaKnown RBP19.46■□□□□ 0.71
SHISA5-216ENST00000494854 SSFA2P28290 1259 aa19.45■□□□□ 0.7
SHISA5-216ENST00000494854 POLD1P28340 1107 aa19.45■□□□□ 0.7
SHISA5-216ENST00000494854 EIF4A1P60842 406 aaKnown RBP19.45■□□□□ 0.7
SHISA5-216ENST00000494854 FKBP5Q13451 457 aaPredicted RBP19.45■□□□□ 0.7
SHISA5-216ENST00000494854 RC3H1Q5TC82 1133 aaKnown RBP19.45■□□□□ 0.7
SHISA5-216ENST00000494854 CEP85Q6P2H3 762 aa19.45■□□□□ 0.7
SHISA5-216ENST00000494854 UPF2Q9HAU5 1272 aaKnown RBP19.45■□□□□ 0.7
SHISA5-216ENST00000494854 HDGFL1Q5TGJ6 251 aa19.44■□□□□ 0.7
SHISA5-216ENST00000494854 DCTPP1Q9H773 170 aa19.44■□□□□ 0.7
SHISA5-216ENST00000494854 BTBD11A6QL63 1104 aa19.43■□□□□ 0.7
SHISA5-216ENST00000494854 COL5A3P25940 1745 aaPredicted RBP19.43■□□□□ 0.7
SHISA5-216ENST00000494854 HOXB7P09629 217 aa19.43■□□□□ 0.7
SHISA5-216ENST00000494854 AMIGO3Q86WK7 504 aa19.43■□□□□ 0.7
SHISA5-216ENST00000494854 SYT17Q9BSW7 474 aa19.43■□□□□ 0.7
SHISA5-216ENST00000494854 FHDC1Q9C0D6 1143 aaPredicted RBP19.43■□□□□ 0.7
SHISA5-216ENST00000494854 PXDNLA1KZ92 1463 aa19.43■□□□□ 0.7
SHISA5-216ENST00000494854 CICQ96RK0 1608 aaPredicted RBP19.43■□□□□ 0.7
SHISA5-216ENST00000494854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.42■□□□□ 0.7
SHISA5-216ENST00000494854 CNTNAP4Q9C0A0 1308 aa19.41■□□□□ 0.7
SHISA5-216ENST00000494854 PTCD1O75127 700 aaKnown RBP19.41■□□□□ 0.7
SHISA5-216ENST00000494854 DAXXQ9UER7 740 aaPredicted RBP19.41■□□□□ 0.7
SHISA5-216ENST00000494854 GNPATO15228 680 aa19.41■□□□□ 0.7
SHISA5-216ENST00000494854 CHMP4AQ9BY43 222 aa19.41■□□□□ 0.7
SHISA5-216ENST00000494854 KCNQ3O43525 872 aa19.4■□□□□ 0.7
SHISA5-216ENST00000494854 MYH14Q7Z406 1995 aaKnown RBP19.4■□□□□ 0.7
SHISA5-216ENST00000494854 BMP2KLQ5H9B9 411 aa19.39■□□□□ 0.7
SHISA5-216ENST00000494854 TBC1D32Q96NH3 1257 aa19.39■□□□□ 0.7
SHISA5-216ENST00000494854 EIF2S2P20042 333 aaKnown RBP19.39■□□□□ 0.69
SHISA5-216ENST00000494854 RTCBQ9Y3I0 505 aaKnown RBP19.39■□□□□ 0.69
SHISA5-216ENST00000494854 RPS6KA4O75676 772 aa19.38■□□□□ 0.69
SHISA5-216ENST00000494854 PHF14O94880 888 aa19.38■□□□□ 0.69
SHISA5-216ENST00000494854 ADRA2BP18089 450 aa19.38■□□□□ 0.69
SHISA5-216ENST00000494854 SLC4A3P48751 1232 aa19.38■□□□□ 0.69
SHISA5-216ENST00000494854 DCAF8L1A6NGE4 600 aa19.37■□□□□ 0.69
SHISA5-216ENST00000494854 PHAXQ9H814 394 aaKnown RBP19.37■□□□□ 0.69
SHISA5-216ENST00000494854 TJP1Q07157 1748 aa19.37■□□□□ 0.69
SHISA5-216ENST00000494854 HMMRO75330 724 aa19.37■□□□□ 0.69
SHISA5-216ENST00000494854 GNAI2P04899 355 aa19.37■□□□□ 0.69
SHISA5-216ENST00000494854 TRAPPC3LQ5T215 181 aa19.37■□□□□ 0.69
SHISA5-216ENST00000494854 SMIM5Q71RC9 77 aa19.37■□□□□ 0.69
SHISA5-216ENST00000494854 GNAI3P08754 354 aa19.36■□□□□ 0.69
SHISA5-216ENST00000494854 SLC39A6Q13433 755 aa19.36■□□□□ 0.69
SHISA5-216ENST00000494854 VSIG10Q8N0Z9 540 aa19.36■□□□□ 0.69
SHISA5-216ENST00000494854 UBR2Q8IWV8 1755 aa19.35■□□□□ 0.69
SHISA5-216ENST00000494854 KCPQ6ZWJ8 1503 aa19.35■□□□□ 0.69
SHISA5-216ENST00000494854 MSL1Q68DK7 614 aa19.35■□□□□ 0.69
SHISA5-216ENST00000494854 CHPF2Q9P2E5 772 aa19.35■□□□□ 0.69
SHISA5-216ENST00000494854 CRKLP46109 303 aaKnown RBP19.35■□□□□ 0.69
SHISA5-216ENST00000494854 HEG1Q9ULI3 1381 aa19.35■□□□□ 0.69
SHISA5-216ENST00000494854 MFAP1P55081 439 aaKnown RBP19.34■□□□□ 0.69
SHISA5-216ENST00000494854 ARHGEF1Q92888 912 aaKnown RBP19.33■□□□□ 0.69
SHISA5-216ENST00000494854 NBR1Q14596 966 aa19.33■□□□□ 0.68
SHISA5-216ENST00000494854 INTS5Q6P9B9 1019 aaKnown RBP19.33■□□□□ 0.68
SHISA5-216ENST00000494854 PLEKHM2Q8IWE5 1019 aa19.33■□□□□ 0.68
SHISA5-216ENST00000494854 DNAJC10Q8IXB1 793 aa19.33■□□□□ 0.68
SHISA5-216ENST00000494854 GIGYF1O75420 1035 aaPredicted RBP19.32■□□□□ 0.68
SHISA5-216ENST00000494854 ZNF790Q6PG37 636 aa19.32■□□□□ 0.68
SHISA5-216ENST00000494854 TTC5Q8N0Z6 440 aa19.32■□□□□ 0.68
SHISA5-216ENST00000494854 C22orf23Q9BZE7 217 aa19.32■□□□□ 0.68
SHISA5-216ENST00000494854 CYP19A1P11511 503 aaPredicted RBP19.31■□□□□ 0.68
SHISA5-216ENST00000494854 BECN1Q14457 450 aa19.31■□□□□ 0.68
SHISA5-216ENST00000494854 NLGN1Q8N2Q7 840 aa19.31■□□□□ 0.68
SHISA5-216ENST00000494854 CCDC87Q9NVE4 849 aa19.31■□□□□ 0.68
SHISA5-216ENST00000494854 DBF4Q9UBU7 674 aaPredicted RBP19.31■□□□□ 0.68
SHISA5-216ENST00000494854 CD2APQ9Y5K6 639 aa19.31■□□□□ 0.68
SHISA5-216ENST00000494854 RFC4P35249 363 aa19.3■□□□□ 0.68
SHISA5-216ENST00000494854 USP44Q9H0E7 712 aa19.3■□□□□ 0.68
SHISA5-216ENST00000494854 C16orf71Q8IYS4 520 aaPredicted RBP19.29■□□□□ 0.68
SHISA5-216ENST00000494854 SRCIN1Q9C0H9 1055 aa19.29■□□□□ 0.68
SHISA5-216ENST00000494854 APBB1O00213 710 aa19.29■□□□□ 0.68
SHISA5-216ENST00000494854 SMARCA5O60264 1052 aaPredicted RBP19.29■□□□□ 0.68
SHISA5-216ENST00000494854 ANXA1P04083 346 aa19.29■□□□□ 0.68
SHISA5-216ENST00000494854 ATP8B2P98198 1209 aa19.29■□□□□ 0.68
SHISA5-216ENST00000494854 DNAAF4Q8WXU2 420 aa19.29■□□□□ 0.68
SHISA5-216ENST00000494854 ZNF496Q96IT1 587 aaPredicted RBP19.29■□□□□ 0.68
SHISA5-216ENST00000494854 TEX13AQ9BXU3 409 aaPredicted RBP19.29■□□□□ 0.68
SHISA5-216ENST00000494854 C4AP0C0L4 1744 aa19.28■□□□□ 0.68
SHISA5-216ENST00000494854 PI4KAP2A4QPH2 592 aa19.28■□□□□ 0.68
SHISA5-216ENST00000494854 UBTFL1P0CB47 393 aaPredicted RBP19.28■□□□□ 0.68
SHISA5-216ENST00000494854 GSPT1P15170 499 aaKnown RBP19.28■□□□□ 0.68
SHISA5-216ENST00000494854 KLHL34Q8N239 644 aa19.28■□□□□ 0.68
SHISA5-216ENST00000494854 PI4KAP1Q8N8J0 262 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms