RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 ERFEQ4G0M1 354 aa19.57■□□□□ 0.72
PCCB-219ENST00000494742 POTECB2RU33 542 aa19.56■□□□□ 0.72
PCCB-219ENST00000494742 RTF1Q92541 710 aaKnown RBP19.56■□□□□ 0.72
PCCB-219ENST00000494742 MASTLQ96GX5 879 aa19.56■□□□□ 0.72
PCCB-219ENST00000494742 TAOK3Q9H2K8 898 aa19.56■□□□□ 0.72
PCCB-219ENST00000494742 ZNF652Q9Y2D9 606 aa19.56■□□□□ 0.72
PCCB-219ENST00000494742 USP16Q9Y5T5 823 aa19.56■□□□□ 0.72
PCCB-219ENST00000494742 SLX4Q8IY92 1834 aa19.55■□□□□ 0.72
PCCB-219ENST00000494742 KCNQ3O43525 872 aa19.55■□□□□ 0.72
PCCB-219ENST00000494742 SNRPA1P09661 255 aaKnown RBP19.55■□□□□ 0.72
PCCB-219ENST00000494742 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
PCCB-219ENST00000494742 CACNA1SQ13698 1873 aa19.54■□□□□ 0.72
PCCB-219ENST00000494742 HTATSF1O43719 755 aaKnown RBP19.54■□□□□ 0.72
PCCB-219ENST00000494742 PRPF40BQ6NWY9 871 aaKnown RBP19.54■□□□□ 0.72
PCCB-219ENST00000494742 CCDC24Q8N4L8 307 aa19.54■□□□□ 0.72
PCCB-219ENST00000494742 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
PCCB-219ENST00000494742 U2AF1L5P0DN76 240 aaPredicted RBP19.52■□□□□ 0.72
PCCB-219ENST00000494742 U2AF1Q01081 240 aaKnown RBP eCLIP19.52■□□□□ 0.72
PCCB-219ENST00000494742 NBPF5PQ86XG9 351 aaPredicted RBP19.52■□□□□ 0.72
PCCB-219ENST00000494742 KLRG2A4D1S0 409 aaPredicted RBP19.51■□□□□ 0.71
PCCB-219ENST00000494742 NPR1P16066 1061 aa19.5■□□□□ 0.71
PCCB-219ENST00000494742 PPP2R1AP30153 589 aa19.5■□□□□ 0.71
PCCB-219ENST00000494742 COL13A1Q5TAT6 717 aaPredicted RBP19.5■□□□□ 0.71
PCCB-219ENST00000494742 TPTE2Q6XPS3 522 aa19.5■□□□□ 0.71
PCCB-219ENST00000494742 MCM10Q7L590 875 aa19.5■□□□□ 0.71
PCCB-219ENST00000494742 C7orf43Q8WVR3 580 aa19.5■□□□□ 0.71
PCCB-219ENST00000494742 PRAMEF22A3QJZ6 481 aa19.49■□□□□ 0.71
PCCB-219ENST00000494742 CHADLQ6NUI6 762 aa19.49■□□□□ 0.71
PCCB-219ENST00000494742 SCN4AP35499 1836 aa19.48■□□□□ 0.71
PCCB-219ENST00000494742 LAMB4A4D0S4 1761 aa19.48■□□□□ 0.71
PCCB-219ENST00000494742 IQCA1LA6NCM1 817 aa19.48■□□□□ 0.71
PCCB-219ENST00000494742 PIP4K2AP48426 406 aaPredicted RBP19.48■□□□□ 0.71
PCCB-219ENST00000494742 CCDC93Q567U6 631 aa19.48■□□□□ 0.71
PCCB-219ENST00000494742 PCNTO95613 3336 aa19.47■□□□□ 0.71
PCCB-219ENST00000494742 NBPF26B4DH59 902 aa19.47■□□□□ 0.71
PCCB-219ENST00000494742 DDNO94850 711 aaPredicted RBP19.47■□□□□ 0.71
PCCB-219ENST00000494742 TAF7Q15545 349 aaPredicted RBP19.47■□□□□ 0.71
PCCB-219ENST00000494742 NBPF10Q6P3W6 841 aaKnown RBP19.47■□□□□ 0.71
PCCB-219ENST00000494742 NBPF15Q8N660 670 aa19.47■□□□□ 0.71
PCCB-219ENST00000494742 L3MBTL3Q96JM7 780 aaPredicted RBP19.47■□□□□ 0.71
PCCB-219ENST00000494742 CREBZFQ9NS37 354 aa19.47■□□□□ 0.71
PCCB-219ENST00000494742 NIP7Q9Y221 180 aaKnown RBP eCLIP19.47■□□□□ 0.71
PCCB-219ENST00000494742 ALDH1B1P30837 517 aa19.45■□□□□ 0.7
PCCB-219ENST00000494742 FKBP4Q02790 459 aaKnown RBP eCLIP19.45■□□□□ 0.7
PCCB-219ENST00000494742 RTKN2Q8IZC4 609 aa19.45■□□□□ 0.7
PCCB-219ENST00000494742 HSPA1AP0DMV8 641 aaKnown RBP19.44■□□□□ 0.7
PCCB-219ENST00000494742 HSPA1BP0DMV9 641 aaKnown RBP19.44■□□□□ 0.7
PCCB-219ENST00000494742 DCTN1Q14203 1278 aa19.44■□□□□ 0.7
PCCB-219ENST00000494742 TNS4Q8IZW8 715 aa19.44■□□□□ 0.7
PCCB-219ENST00000494742 PNISRQ8TF01 805 aaKnown RBP19.44■□□□□ 0.7
PCCB-219ENST00000494742 NEFMP07197 916 aa19.43■□□□□ 0.7
PCCB-219ENST00000494742 LDHDQ86WU2 507 aa19.43■□□□□ 0.7
PCCB-219ENST00000494742 KDM3BQ7LBC6 1761 aa19.42■□□□□ 0.7
PCCB-219ENST00000494742 ERVV-1B6SEH8 477 aa19.42■□□□□ 0.7
PCCB-219ENST00000494742 DLG5Q8TDM6 1919 aa19.42■□□□□ 0.7
PCCB-219ENST00000494742 GTF2E1P29083 439 aaPredicted RBP19.41■□□□□ 0.7
PCCB-219ENST00000494742 NYXQ9GZU5 481 aa19.41■□□□□ 0.7
PCCB-219ENST00000494742 TAF1DQ9H5J8 278 aaPredicted RBP19.41■□□□□ 0.7
PCCB-219ENST00000494742 NUP98P52948 1817 aa19.4■□□□□ 0.7
PCCB-219ENST00000494742 POTEIP0CG38 1075 aa19.4■□□□□ 0.7
PCCB-219ENST00000494742 POTEJP0CG39 1038 aa19.4■□□□□ 0.7
PCCB-219ENST00000494742 HLFQ16534 295 aa19.4■□□□□ 0.7
PCCB-219ENST00000494742 CRY2Q49AN0 593 aa19.4■□□□□ 0.7
PCCB-219ENST00000494742 PASKQ96RG2 1323 aa19.4■□□□□ 0.7
PCCB-219ENST00000494742 CC2D2BQ6DHV5 1058 aa19.39■□□□□ 0.69
PCCB-219ENST00000494742 ZNF277Q9NRM2 450 aaPredicted RBP19.39■□□□□ 0.69
PCCB-219ENST00000494742 RIC1Q4ADV7 1423 aa19.39■□□□□ 0.69
PCCB-219ENST00000494742 GRIPAP1Q4V328 841 aa19.38■□□□□ 0.69
PCCB-219ENST00000494742 PSMD1Q99460 953 aa19.38■□□□□ 0.69
PCCB-219ENST00000494742 MIS18AQ9NYP9 233 aa19.38■□□□□ 0.69
PCCB-219ENST00000494742 IBTKQ9P2D0 1353 aaPredicted RBP19.38■□□□□ 0.69
PCCB-219ENST00000494742 HACL1Q9UJ83 578 aa19.38■□□□□ 0.69
PCCB-219ENST00000494742 ADAMTSL1Q8N6G6 1762 aa19.37■□□□□ 0.69
PCCB-219ENST00000494742 SNED1Q8TER0 1413 aa19.37■□□□□ 0.69
PCCB-219ENST00000494742 MAP3K15Q6ZN16 1313 aa19.37■□□□□ 0.69
PCCB-219ENST00000494742 FAM177BA6PVY3 158 aa19.37■□□□□ 0.69
PCCB-219ENST00000494742 FZD9O00144 591 aa19.37■□□□□ 0.69
PCCB-219ENST00000494742 IARSP41252 1262 aaKnown RBP19.37■□□□□ 0.69
PCCB-219ENST00000494742 PNMA8AQ86V59 439 aaPredicted RBP19.37■□□□□ 0.69
PCCB-219ENST00000494742 PNNQ9H307 717 aaKnown RBP19.37■□□□□ 0.69
PCCB-219ENST00000494742 MKRN1Q9UHC7 482 aaKnown RBP19.37■□□□□ 0.69
PCCB-219ENST00000494742 CNTNAP1P78357 1384 aa19.36■□□□□ 0.69
PCCB-219ENST00000494742 ZNF541Q9H0D2 1346 aa19.36■□□□□ 0.69
PCCB-219ENST00000494742 KIF6Q6ZMV9 814 aa19.36■□□□□ 0.69
PCCB-219ENST00000494742 GPC2Q8N158 579 aa19.36■□□□□ 0.69
PCCB-219ENST00000494742 SYNE4Q8N205 404 aa19.36■□□□□ 0.69
PCCB-219ENST00000494742 PLEKHF1Q96S99 279 aa19.36■□□□□ 0.69
PCCB-219ENST00000494742 ITGBL1O95965 494 aaPredicted RBP19.35■□□□□ 0.69
PCCB-219ENST00000494742 HOXA10P31260 410 aaPredicted RBP19.35■□□□□ 0.69
PCCB-219ENST00000494742 EPHX2P34913 555 aa19.35■□□□□ 0.69
PCCB-219ENST00000494742 EIF4A1P60842 406 aaKnown RBP19.35■□□□□ 0.69
PCCB-219ENST00000494742 OLFM4Q6UX06 510 aa19.35■□□□□ 0.69
PCCB-219ENST00000494742 JDP2Q8WYK2 163 aa19.35■□□□□ 0.69
PCCB-219ENST00000494742 ERBB4Q15303 1308 aa19.34■□□□□ 0.69
PCCB-219ENST00000494742 TMEM88BA6NKF7 163 aa19.34■□□□□ 0.69
PCCB-219ENST00000494742 NFE2L2Q16236 605 aa19.34■□□□□ 0.69
PCCB-219ENST00000494742 ABCC12Q96J65 1359 aa19.33■□□□□ 0.69
PCCB-219ENST00000494742 EAPPQ56P03 285 aaPredicted RBP19.33■□□□□ 0.68
PCCB-219ENST00000494742 NGEFQ8N5V2 710 aa19.33■□□□□ 0.68
PCCB-219ENST00000494742 RPGRQ92834 1020 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms