RNA–Protein interactions for RNA: ENST00000494658.1

EIF3B-212, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 637 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-212ENST00000494658 NBPF15Q8N660 670 aa23.41■■□□□ 1.34
EIF3B-212ENST00000494658 CNBD1Q8NA66 436 aa23.41■■□□□ 1.34
EIF3B-212ENST00000494658 SETDB2Q96T68 719 aa23.41■■□□□ 1.34
EIF3B-212ENST00000494658 GLTPD2A6NH11 291 aa23.4■■□□□ 1.34
EIF3B-212ENST00000494658 PDE6BP35913 854 aa23.4■■□□□ 1.34
EIF3B-212ENST00000494658 FSTL1Q12841 308 aa23.4■■□□□ 1.34
EIF3B-212ENST00000494658 MIS18AQ9NYP9 233 aa23.4■■□□□ 1.34
EIF3B-212ENST00000494658 RTF1Q92541 710 aaKnown RBP23.39■■□□□ 1.33
EIF3B-212ENST00000494658 POTECB2RU33 542 aa23.38■■□□□ 1.33
EIF3B-212ENST00000494658 SNRPA1P09661 255 aaKnown RBP23.38■■□□□ 1.33
EIF3B-212ENST00000494658 NPHP1O15259 732 aa23.36■■□□□ 1.33
EIF3B-212ENST00000494658 SRGNP10124 158 aa23.36■■□□□ 1.33
EIF3B-212ENST00000494658 PRPF40BQ6NWY9 871 aaKnown RBP23.36■■□□□ 1.33
EIF3B-212ENST00000494658 NPM2Q86SE8 214 aaKnown RBP23.36■■□□□ 1.33
EIF3B-212ENST00000494658 ST5P78524 1137 aa23.35■■□□□ 1.33
EIF3B-212ENST00000494658 SMC1BQ8NDV3 1235 aa23.34■■□□□ 1.33
EIF3B-212ENST00000494658 KLRG1Q96E93 195 aa23.34■■□□□ 1.33
EIF3B-212ENST00000494658 FAM177BA6PVY3 158 aa23.33■■□□□ 1.33
EIF3B-212ENST00000494658 VEGFAP15692 232 aaPredicted RBP23.33■■□□□ 1.33
EIF3B-212ENST00000494658 HLFQ16534 295 aa23.33■■□□□ 1.33
EIF3B-212ENST00000494658 STYK1Q6J9G0 422 aa23.33■■□□□ 1.33
EIF3B-212ENST00000494658 NBPF5PQ86XG9 351 aaPredicted RBP23.33■■□□□ 1.33
EIF3B-212ENST00000494658 THUMPD2Q9BTF0 503 aaKnown RBP23.33■■□□□ 1.33
EIF3B-212ENST00000494658 PDZRN3Q9UPQ7 1066 aa23.33■■□□□ 1.33
EIF3B-212ENST00000494658 HTATSF1O43719 755 aaKnown RBP23.32■■□□□ 1.32
EIF3B-212ENST00000494658 TAF7Q15545 349 aaPredicted RBP23.32■■□□□ 1.32
EIF3B-212ENST00000494658 ERFEQ4G0M1 354 aa23.32■■□□□ 1.32
EIF3B-212ENST00000494658 OLFM4Q6UX06 510 aa23.32■■□□□ 1.32
EIF3B-212ENST00000494658 MASTLQ96GX5 879 aa23.32■■□□□ 1.32
EIF3B-212ENST00000494658 LTBP3Q9NS15 1303 aa23.32■■□□□ 1.32
EIF3B-212ENST00000494658 CNKSR1Q969H4 720 aa23.31■■□□□ 1.32
EIF3B-212ENST00000494658 PLEKHF1Q96S99 279 aa23.31■■□□□ 1.32
EIF3B-212ENST00000494658 TAOK3Q9H2K8 898 aa23.31■■□□□ 1.32
EIF3B-212ENST00000494658 NIP7Q9Y221 180 aaKnown RBP eCLIP23.31■■□□□ 1.32
EIF3B-212ENST00000494658 CLEC4GQ6UXB4 293 aa23.3■■□□□ 1.32
EIF3B-212ENST00000494658 SCN4AP35499 1836 aa23.3■■□□□ 1.32
EIF3B-212ENST00000494658 NGEFQ8N5V2 710 aa23.29■■□□□ 1.32
EIF3B-212ENST00000494658 C7orf43Q8WVR3 580 aa23.29■■□□□ 1.32
EIF3B-212ENST00000494658 ZNF652Q9Y2D9 606 aa23.29■■□□□ 1.32
EIF3B-212ENST00000494658 ABCC12Q96J65 1359 aa23.28■■□□□ 1.32
EIF3B-212ENST00000494658 DDNO94850 711 aaPredicted RBP23.28■■□□□ 1.32
EIF3B-212ENST00000494658 POTEIP0CG38 1075 aa23.28■■□□□ 1.32
EIF3B-212ENST00000494658 POTEJP0CG39 1038 aa23.28■■□□□ 1.32
EIF3B-212ENST00000494658 JMYQ8N9B5 988 aa23.28■■□□□ 1.32
EIF3B-212ENST00000494658 LAMB2P55268 1798 aa23.26■■□□□ 1.31
EIF3B-212ENST00000494658 ANKRD36CQ5JPF3 1778 aa23.26■■□□□ 1.31
EIF3B-212ENST00000494658 KLRG2A4D1S0 409 aaPredicted RBP23.25■■□□□ 1.31
EIF3B-212ENST00000494658 EIF4A1P60842 406 aaKnown RBP23.25■■□□□ 1.31
EIF3B-212ENST00000494658 NFE2L2Q16236 605 aa23.25■■□□□ 1.31
EIF3B-212ENST00000494658 TTLL7Q6ZT98 887 aa23.25■■□□□ 1.31
EIF3B-212ENST00000494658 SLC51AQ86UW1 340 aa23.25■■□□□ 1.31
EIF3B-212ENST00000494658 NPR1P16066 1061 aa23.24■■□□□ 1.31
EIF3B-212ENST00000494658 DPY19L2Q6NUT2 758 aa23.24■■□□□ 1.31
EIF3B-212ENST00000494658 SNED1Q8TER0 1413 aa23.24■■□□□ 1.31
EIF3B-212ENST00000494658 COL4A5P29400 1685 aa23.23■■□□□ 1.31
EIF3B-212ENST00000494658 TPTE2Q6XPS3 522 aa23.23■■□□□ 1.31
EIF3B-212ENST00000494658 NUTM1Q86Y26 1132 aa23.23■■□□□ 1.31
EIF3B-212ENST00000494658 RRP7AQ9Y3A4 280 aaKnown RBP23.23■■□□□ 1.31
EIF3B-212ENST00000494658 ADAMTSL1Q8N6G6 1762 aa23.22■■□□□ 1.31
EIF3B-212ENST00000494658 MYL6BP14649 208 aa23.22■■□□□ 1.31
EIF3B-212ENST00000494658 CCDC93Q567U6 631 aa23.22■■□□□ 1.31
EIF3B-212ENST00000494658 ZNF277Q9NRM2 450 aaPredicted RBP23.22■■□□□ 1.31
EIF3B-212ENST00000494658 UBN2Q6ZU65 1347 aa23.22■■□□□ 1.31
EIF3B-212ENST00000494658 ZNF541Q9H0D2 1346 aa23.22■■□□□ 1.31
EIF3B-212ENST00000494658 MAP3K15Q6ZN16 1313 aa23.21■■□□□ 1.31
EIF3B-212ENST00000494658 TAF1P21675 1872 aa23.21■■□□□ 1.31
EIF3B-212ENST00000494658 RGL2O15211 777 aa23.2■■□□□ 1.3
EIF3B-212ENST00000494658 GPTP24298 496 aa23.2■■□□□ 1.3
EIF3B-212ENST00000494658 FKBP4Q02790 459 aaKnown RBP eCLIP23.2■■□□□ 1.3
EIF3B-212ENST00000494658 COL13A1Q5TAT6 717 aaPredicted RBP23.2■■□□□ 1.3
EIF3B-212ENST00000494658 SOGA3Q5TF21 947 aa23.2■■□□□ 1.3
EIF3B-212ENST00000494658 ZBTB3Q9H5J0 574 aa23.2■■□□□ 1.3
EIF3B-212ENST00000494658 LTBP1Q14766 1721 aa23.19■■□□□ 1.3
EIF3B-212ENST00000494658 NEFMP07197 916 aa23.18■■□□□ 1.3
EIF3B-212ENST00000494658 PNISRQ8TF01 805 aaKnown RBP23.18■■□□□ 1.3
EIF3B-212ENST00000494658 MAPK8IP3Q9UPT6 1336 aa23.16■■□□□ 1.3
EIF3B-212ENST00000494658 ERVV-1B6SEH8 477 aa23.16■■□□□ 1.3
EIF3B-212ENST00000494658 GTF2E1P29083 439 aaPredicted RBP23.16■■□□□ 1.3
EIF3B-212ENST00000494658 CRY2Q49AN0 593 aa23.16■■□□□ 1.3
EIF3B-212ENST00000494658 CHADLQ6NUI6 762 aa23.16■■□□□ 1.3
EIF3B-212ENST00000494658 SUSD4Q5VX71 490 aa23.15■■□□□ 1.3
EIF3B-212ENST00000494658 C3orf67Q6ZVT6 689 aa23.15■■□□□ 1.3
EIF3B-212ENST00000494658 LRP10Q7Z4F1 713 aa23.15■■□□□ 1.3
EIF3B-212ENST00000494658 L3MBTL3Q96JM7 780 aaPredicted RBP23.15■■□□□ 1.3
EIF3B-212ENST00000494658 ANXA1P04083 346 aa23.14■■□□□ 1.29
EIF3B-212ENST00000494658 PROSER3Q2NL68 480 aa23.14■■□□□ 1.29
EIF3B-212ENST00000494658 KIF6Q6ZMV9 814 aa23.14■■□□□ 1.29
EIF3B-212ENST00000494658 SYNE4Q8N205 404 aa23.14■■□□□ 1.29
EIF3B-212ENST00000494658 TAF1DQ9H5J8 278 aaPredicted RBP23.14■■□□□ 1.29
EIF3B-212ENST00000494658 RIC1Q4ADV7 1423 aa23.14■■□□□ 1.29
EIF3B-212ENST00000494658 IARSP41252 1262 aaKnown RBP23.13■■□□□ 1.29
EIF3B-212ENST00000494658 PDIA6Q15084 440 aa23.13■■□□□ 1.29
EIF3B-212ENST00000494658 TSPYL4Q9UJ04 414 aa23.13■■□□□ 1.29
EIF3B-212ENST00000494658 IBTKQ9P2D0 1353 aaPredicted RBP23.13■■□□□ 1.29
EIF3B-212ENST00000494658 NTSR2O95665 410 aa23.12■■□□□ 1.29
EIF3B-212ENST00000494658 HSPA1AP0DMV8 641 aaKnown RBP23.12■■□□□ 1.29
EIF3B-212ENST00000494658 HSPA1BP0DMV9 641 aaKnown RBP23.12■■□□□ 1.29
EIF3B-212ENST00000494658 ZNF34Q8IZ26 560 aa23.12■■□□□ 1.29
EIF3B-212ENST00000494658 NYXQ9GZU5 481 aa23.12■■□□□ 1.29
EIF3B-212ENST00000494658 ALDH1B1P30837 517 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms