RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 C10orf67Q8IYJ2 551 aa12□□□□□ -0.49
LINC00488-201ENST00000494582 ATG3Q9NT62 314 aa12□□□□□ -0.49
LINC00488-201ENST00000494582 ATP6V1DQ9Y5K8 247 aa12□□□□□ -0.49
LINC00488-201ENST00000494582 MUM1L1Q5H9M0 696 aa12□□□□□ -0.49
LINC00488-201ENST00000494582 RBM43Q6ZSC3 357 aaKnown RBP12□□□□□ -0.49
LINC00488-201ENST00000494582 PUS7Q96PZ0 661 aaKnown RBP12□□□□□ -0.49
LINC00488-201ENST00000494582 EFCC1Q9HA90 598 aa12□□□□□ -0.49
LINC00488-201ENST00000494582 FANCAO15360 1455 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 A0A087WWV3 80 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 CCDC69A6NI79 296 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 F6X3S4 739 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 SEC31AO94979 1220 aaKnown RBP11.99□□□□□ -0.49
LINC00488-201ENST00000494582 COL9A3Q14050 684 aaPredicted RBP11.99□□□□□ -0.49
LINC00488-201ENST00000494582 RASSF4Q9H2L5 321 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 RIMS2Q9UQ26 1411 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 PPLO60437 1756 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 MYO1CO00159 1063 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 CCDC93Q567U6 631 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 EFCAB2Q5VUJ9 269 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 CDC37L1Q7L3B6 337 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 DDX54Q8TDD1 881 aaKnown RBP11.99□□□□□ -0.49
LINC00488-201ENST00000494582 L2HGDHQ9H9P8 463 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 HYPKQ9NX55 129 aa11.99□□□□□ -0.49
LINC00488-201ENST00000494582 ZCCHC11Q5TAX3 1644 aaKnown RBP11.98□□□□□ -0.49
LINC00488-201ENST00000494582 PNMA6EA0A0J9YXQ4 647 aa11.98□□□□□ -0.49
LINC00488-201ENST00000494582 NR1I2O75469 434 aa11.98□□□□□ -0.49
LINC00488-201ENST00000494582 CDC25BP30305 580 aa11.98□□□□□ -0.49
LINC00488-201ENST00000494582 IQCB1Q15051 598 aa11.98□□□□□ -0.49
LINC00488-201ENST00000494582 ARHGAP29Q52LW3 1261 aa11.98□□□□□ -0.49
LINC00488-201ENST00000494582 C11orf57Q6ZUT1 292 aaPredicted RBP11.98□□□□□ -0.49
LINC00488-201ENST00000494582 NECAB1Q8N987 351 aa11.98□□□□□ -0.49
LINC00488-201ENST00000494582 TFIP11Q9UBB9 837 aaKnown RBP11.98□□□□□ -0.49
LINC00488-201ENST00000494582 SASH3O75995 380 aa11.98□□□□□ -0.49
LINC00488-201ENST00000494582 TNNT3P45378 269 aaPredicted RBP11.98□□□□□ -0.49
LINC00488-201ENST00000494582 G2E3Q7L622 706 aa11.98□□□□□ -0.49
LINC00488-201ENST00000494582 FILIP1Q7Z7B0 1213 aa11.98□□□□□ -0.49
LINC00488-201ENST00000494582 UBXN6Q9BZV1 441 aa11.98□□□□□ -0.49
LINC00488-201ENST00000494582 LSG1Q9H089 658 aaKnown RBP11.98□□□□□ -0.49
LINC00488-201ENST00000494582 CLSTN2Q9H4D0 955 aa11.98□□□□□ -0.49
LINC00488-201ENST00000494582 LRRFIP2Q9Y608 721 aaKnown RBP11.98□□□□□ -0.49
LINC00488-201ENST00000494582 TTC21AQ8NDW8 1320 aa11.98□□□□□ -0.49
LINC00488-201ENST00000494582 CDK12Q9NYV4 1490 aaPredicted RBP11.98□□□□□ -0.49
LINC00488-201ENST00000494582 ABCC3O15438 1527 aa11.97□□□□□ -0.49
LINC00488-201ENST00000494582 LRRCC1Q9C099 1032 aa11.97□□□□□ -0.49
LINC00488-201ENST00000494582 LOC102724159A0A0B4J2E5 919 aa11.97□□□□□ -0.49
LINC00488-201ENST00000494582 HMMRO75330 724 aa11.97□□□□□ -0.49
LINC00488-201ENST00000494582 PWP2Q15269 919 aaKnown RBP11.97□□□□□ -0.49
LINC00488-201ENST00000494582 ADCK5Q3MIX3 580 aa11.97□□□□□ -0.49
LINC00488-201ENST00000494582 E4F1Q66K89 784 aaPredicted RBP11.97□□□□□ -0.49
LINC00488-201ENST00000494582 EPC1Q9H2F5 836 aa11.97□□□□□ -0.49
LINC00488-201ENST00000494582 STAP2Q9UGK3 403 aa11.97□□□□□ -0.49
LINC00488-201ENST00000494582 EMILIN1Q9Y6C2 1016 aa11.97□□□□□ -0.49
LINC00488-201ENST00000494582 EFCAB6Q5THR3 1501 aa11.96□□□□□ -0.49
LINC00488-201ENST00000494582 TTC21BQ7Z4L5 1316 aa11.96□□□□□ -0.49
LINC00488-201ENST00000494582 CASTP20810 708 aaKnown RBP11.96□□□□□ -0.49
LINC00488-201ENST00000494582 TSGA10IPQ3SY00 556 aa11.96□□□□□ -0.49
LINC00488-201ENST00000494582 SLC4A10Q6U841 1118 aa11.96□□□□□ -0.49
LINC00488-201ENST00000494582 REXO1L1PQ8IX06 675 aa11.96□□□□□ -0.49
LINC00488-201ENST00000494582 CCDC191Q8NCU4 936 aa11.96□□□□□ -0.49
LINC00488-201ENST00000494582 SIRT1Q96EB6 747 aa11.96□□□□□ -0.49
LINC00488-201ENST00000494582 PGBD1Q96JS3 809 aa11.96□□□□□ -0.49
LINC00488-201ENST00000494582 PREX1Q8TCU6 1659 aa11.96□□□□□ -0.49
LINC00488-201ENST00000494582 FANCGO15287 622 aa11.96□□□□□ -0.5
LINC00488-201ENST00000494582 ME3Q16798 604 aa11.96□□□□□ -0.5
LINC00488-201ENST00000494582 YY1AP1Q9H869 796 aa11.96□□□□□ -0.5
LINC00488-201ENST00000494582 SPG7Q9UQ90 795 aa11.96□□□□□ -0.5
LINC00488-201ENST00000494582 SGSM2O43147 1006 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 IFIT2P09913 472 aaKnown RBP11.95□□□□□ -0.5
LINC00488-201ENST00000494582 IL13P35225 146 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 ZSCAN26Q16670 478 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 TXLNBQ8N3L3 684 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 MRFAP1L1Q96HT8 127 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 IL1RAPL2Q9NP60 686 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 ORC3Q9UBD5 711 aaPredicted RBP11.95□□□□□ -0.5
LINC00488-201ENST00000494582 CFAP65Q6ZU64 1925 aaKnown RBP11.95□□□□□ -0.5
LINC00488-201ENST00000494582 ELP1O95163 1332 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 GNAI3P08754 354 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 CASQ1P31415 396 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 KRT85P78386 507 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 GORABQ5T7V8 394 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 SARM1Q6SZW1 724 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 NUTM1Q86Y26 1132 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00488-201ENST00000494582 SLC52A1Q9NWF4 448 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 GEMIN8Q9NWZ8 242 aaKnown RBP11.95□□□□□ -0.5
LINC00488-201ENST00000494582 STK26Q9P289 416 aa11.95□□□□□ -0.5
LINC00488-201ENST00000494582 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00488-201ENST00000494582 CPSF1Q10570 1443 aaKnown RBP11.95□□□□□ -0.5
LINC00488-201ENST00000494582 OAS2P29728 719 aaKnown RBP11.94□□□□□ -0.5
LINC00488-201ENST00000494582 SNW1Q13573 536 aaKnown RBP11.94□□□□□ -0.5
LINC00488-201ENST00000494582 RNF20Q5VTR2 975 aa11.94□□□□□ -0.5
LINC00488-201ENST00000494582 PPP1R13BQ96KQ4 1090 aa11.94□□□□□ -0.5
LINC00488-201ENST00000494582 ZFYVE9O95405 1425 aa11.94□□□□□ -0.5
LINC00488-201ENST00000494582 TBC1D8O95759 1140 aa11.94□□□□□ -0.5
LINC00488-201ENST00000494582 SLC4A2P04920 1241 aa11.94□□□□□ -0.5
LINC00488-201ENST00000494582 LEO1Q8WVC0 666 aaPredicted RBP11.94□□□□□ -0.5
LINC00488-201ENST00000494582 KCND1Q9NSA2 647 aa11.94□□□□□ -0.5
LINC00488-201ENST00000494582 MINK1Q8N4C8 1332 aaPredicted RBP11.93□□□□□ -0.5
LINC00488-201ENST00000494582 NEMFO60524 1076 aa11.93□□□□□ -0.5
LINC00488-201ENST00000494582 NBPF11Q86T75 865 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms