RNA–Protein interactions for RNA: ENST00000494538.6

CBWD6-208, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-208ENST00000494538 EZH2Q15910 746 aaKnown RBP16.41■□□□□ 0.22
CBWD6-208ENST00000494538 RREB1Q92766 1687 aa16.41■□□□□ 0.22
CBWD6-208ENST00000494538 HMGB2P26583 209 aaKnown RBP16.4■□□□□ 0.22
CBWD6-208ENST00000494538 PLBD2Q8NHP8 589 aa16.4■□□□□ 0.22
CBWD6-208ENST00000494538 EXOC6Q8TAG9 804 aa16.4■□□□□ 0.22
CBWD6-208ENST00000494538 TBC1D2BQ9UPU7 963 aa16.4■□□□□ 0.22
CBWD6-208ENST00000494538 GTF3C3Q9Y5Q9 886 aa16.4■□□□□ 0.22
CBWD6-208ENST00000494538 MVPQ14764 893 aaKnown RBP16.4■□□□□ 0.22
CBWD6-208ENST00000494538 DEFB132Q7Z7B7 95 aa16.4■□□□□ 0.22
CBWD6-208ENST00000494538 DZIP3Q86Y13 1208 aaKnown RBP16.4■□□□□ 0.22
CBWD6-208ENST00000494538 CCDC125Q86Z20 511 aa16.4■□□□□ 0.22
CBWD6-208ENST00000494538 RTCBQ9Y3I0 505 aaKnown RBP16.4■□□□□ 0.22
CBWD6-208ENST00000494538 COL15A1P39059 1388 aa16.4■□□□□ 0.22
CBWD6-208ENST00000494538 RGPD3A6NKT7 1758 aaPredicted RBP16.39■□□□□ 0.22
CBWD6-208ENST00000494538 RGPD4Q7Z3J3 1758 aa16.39■□□□□ 0.22
CBWD6-208ENST00000494538 RPS6KA4O75676 772 aa16.39■□□□□ 0.21
CBWD6-208ENST00000494538 PHF14O94880 888 aa16.39■□□□□ 0.21
CBWD6-208ENST00000494538 SMIM5Q71RC9 77 aa16.39■□□□□ 0.21
CBWD6-208ENST00000494538 CAMKK2Q96RR4 588 aa16.39■□□□□ 0.21
CBWD6-208ENST00000494538 CCT4P50991 539 aaKnown RBP16.38■□□□□ 0.21
CBWD6-208ENST00000494538 NEXNQ0ZGT2 675 aa16.38■□□□□ 0.21
CBWD6-208ENST00000494538 INTS3Q68E01 1043 aaKnown RBP16.38■□□□□ 0.21
CBWD6-208ENST00000494538 MYD88Q99836 296 aa16.38■□□□□ 0.21
CBWD6-208ENST00000494538 SRCIN1Q9C0H9 1055 aa16.38■□□□□ 0.21
CBWD6-208ENST00000494538 MAP3K15Q6ZN16 1313 aa16.37■□□□□ 0.21
CBWD6-208ENST00000494538 A0A087WZG4 1122 aa16.37■□□□□ 0.21
CBWD6-208ENST00000494538 METTL22Q9BUU2 404 aaPredicted RBP16.37■□□□□ 0.21
CBWD6-208ENST00000494538 DDX19BQ9UMR2 479 aa16.37■□□□□ 0.21
CBWD6-208ENST00000494538 PXDNLA1KZ92 1463 aa16.37■□□□□ 0.21
CBWD6-208ENST00000494538 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
CBWD6-208ENST00000494538 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
CBWD6-208ENST00000494538 TRAPPC3LQ5T215 181 aa16.35■□□□□ 0.21
CBWD6-208ENST00000494538 BEND3Q5T5X7 828 aa16.35■□□□□ 0.21
CBWD6-208ENST00000494538 AMIGO3Q86WK7 504 aa16.35■□□□□ 0.21
CBWD6-208ENST00000494538 ATP5J2-PTCD1G3V325 749 aa16.35■□□□□ 0.21
CBWD6-208ENST00000494538 CWF19L2Q2TBE0 894 aaKnown RBP16.35■□□□□ 0.21
CBWD6-208ENST00000494538 NUP188Q5SRE5 1749 aa16.34■□□□□ 0.21
CBWD6-208ENST00000494538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.34■□□□□ 0.21
CBWD6-208ENST00000494538 RFC4P35249 363 aa16.34■□□□□ 0.21
CBWD6-208ENST00000494538 HLFQ16534 295 aa16.34■□□□□ 0.21
CBWD6-208ENST00000494538 ZNF827Q17R98 1081 aa16.34■□□□□ 0.21
CBWD6-208ENST00000494538 LINS1Q8NG48 757 aa16.34■□□□□ 0.21
CBWD6-208ENST00000494538 ARHGEF1Q92888 912 aaKnown RBP16.34■□□□□ 0.21
CBWD6-208ENST00000494538 ATP10DQ9P241 1426 aa16.34■□□□□ 0.21
CBWD6-208ENST00000494538 ERVV-1B6SEH8 477 aa16.33■□□□□ 0.21
CBWD6-208ENST00000494538 ZPR1O75312 459 aa16.33■□□□□ 0.21
CBWD6-208ENST00000494538 GIGYF2Q6Y7W6 1299 aaKnown RBP16.33■□□□□ 0.21
CBWD6-208ENST00000494538 AKT1S1Q96B36 256 aa16.33■□□□□ 0.21
CBWD6-208ENST00000494538 CAMTA2O94983 1202 aa16.33■□□□□ 0.2
CBWD6-208ENST00000494538 IGKV5-2P06315 115 aa16.33■□□□□ 0.2
CBWD6-208ENST00000494538 SSFA2P28290 1259 aa16.33■□□□□ 0.2
CBWD6-208ENST00000494538 UPF1Q92900 1129 aaKnown RBP eCLIP16.33■□□□□ 0.2
CBWD6-208ENST00000494538 CHMP4BQ9H444 224 aaKnown RBP16.33■□□□□ 0.2
CBWD6-208ENST00000494538 UBR3Q6ZT12 1888 aa16.32■□□□□ 0.2
CBWD6-208ENST00000494538 ZBTB7BO15156 539 aaPredicted RBP16.32■□□□□ 0.2
CBWD6-208ENST00000494538 ALDH1L1O75891 902 aa16.32■□□□□ 0.2
CBWD6-208ENST00000494538 ADRA2BP18089 450 aa16.32■□□□□ 0.2
CBWD6-208ENST00000494538 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
CBWD6-208ENST00000494538 SRP68Q9UHB9 627 aaKnown RBP16.32■□□□□ 0.2
CBWD6-208ENST00000494538 ZNF652Q9Y2D9 606 aa16.32■□□□□ 0.2
CBWD6-208ENST00000494538 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
CBWD6-208ENST00000494538 NEURL1BA8MQ27 555 aa16.31■□□□□ 0.2
CBWD6-208ENST00000494538 MSH5O43196 834 aa16.31■□□□□ 0.2
CBWD6-208ENST00000494538 HSP90AB3PQ58FF7 597 aa16.31■□□□□ 0.2
CBWD6-208ENST00000494538 ERICH6BQ5W0A0 696 aa16.31■□□□□ 0.2
CBWD6-208ENST00000494538 USPL1Q5W0Q7 1092 aa16.31■□□□□ 0.2
CBWD6-208ENST00000494538 MEIS3Q99687 375 aa16.31■□□□□ 0.2
CBWD6-208ENST00000494538 STK32BQ9NY57 414 aa16.31■□□□□ 0.2
CBWD6-208ENST00000494538 C9orf78Q9NZ63 289 aaPredicted RBP16.31■□□□□ 0.2
CBWD6-208ENST00000494538 NARFQ9UHQ1 456 aa16.31■□□□□ 0.2
CBWD6-208ENST00000494538 GPTP24298 496 aa16.31■□□□□ 0.2
CBWD6-208ENST00000494538 ILDR2Q71H61 639 aa16.3■□□□□ 0.2
CBWD6-208ENST00000494538 ANO8Q9HCE9 1232 aaPredicted RBP16.3■□□□□ 0.2
CBWD6-208ENST00000494538 NUP98P52948 1817 aa16.3■□□□□ 0.2
CBWD6-208ENST00000494538 AFDNP55196 1824 aaKnown RBP16.3■□□□□ 0.2
CBWD6-208ENST00000494538 GCKRQ14397 625 aa16.29■□□□□ 0.2
CBWD6-208ENST00000494538 USP44Q9H0E7 712 aa16.29■□□□□ 0.2
CBWD6-208ENST00000494538 ZBTB40Q9NUA8 1239 aa16.29■□□□□ 0.2
CBWD6-208ENST00000494538 CWC25Q9NXE8 425 aaPredicted RBP16.29■□□□□ 0.2
CBWD6-208ENST00000494538 C4AP0C0L4 1744 aa16.29■□□□□ 0.2
CBWD6-208ENST00000494538 USP42Q9H9J4 1324 aaKnown RBP16.29■□□□□ 0.2
CBWD6-208ENST00000494538 GNAI3P08754 354 aa16.29■□□□□ 0.2
CBWD6-208ENST00000494538 UBTFL1P0CB47 393 aaPredicted RBP16.29■□□□□ 0.2
CBWD6-208ENST00000494538 SLC15A2Q16348 729 aa16.29■□□□□ 0.2
CBWD6-208ENST00000494538 ISCA1Q9BUE6 129 aa16.29■□□□□ 0.2
CBWD6-208ENST00000494538 C1orf115Q9H7X2 142 aa16.29■□□□□ 0.2
CBWD6-208ENST00000494538 BCORQ6W2J9 1755 aa16.28■□□□□ 0.2
CBWD6-208ENST00000494538 SCN7AQ01118 1682 aa16.28■□□□□ 0.2
CBWD6-208ENST00000494538 NBPF7P0C2Y1 421 aaPredicted RBP16.28■□□□□ 0.2
CBWD6-208ENST00000494538 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
CBWD6-208ENST00000494538 BICDL1Q6ZP65 573 aa16.28■□□□□ 0.2
CBWD6-208ENST00000494538 CCDC191Q8NCU4 936 aa16.28■□□□□ 0.2
CBWD6-208ENST00000494538 NIP7Q9Y221 180 aaKnown RBP eCLIP16.28■□□□□ 0.2
CBWD6-208ENST00000494538 GRM8O00222 908 aa16.27■□□□□ 0.2
CBWD6-208ENST00000494538 AAMPQ13685 434 aa16.27■□□□□ 0.2
CBWD6-208ENST00000494538 FLAD1Q8NFF5 587 aa16.27■□□□□ 0.2
CBWD6-208ENST00000494538 BCL2L12Q9HB09 334 aa16.27■□□□□ 0.2
CBWD6-208ENST00000494538 PPP4R2Q9NY27 417 aa16.27■□□□□ 0.2
CBWD6-208ENST00000494538 ANKRD36CQ5JPF3 1778 aa16.27■□□□□ 0.2
CBWD6-208ENST00000494538 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms