RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
TRA2A-209ENST00000494255 RGL2O15211 777 aa16.05■□□□□ 0.16
TRA2A-209ENST00000494255 AIMP1Q12904 312 aaKnown RBP16.05■□□□□ 0.16
TRA2A-209ENST00000494255 CLEC4GQ6UXB4 293 aa16.05■□□□□ 0.16
TRA2A-209ENST00000494255 TTLL7Q6ZT98 887 aa16.05■□□□□ 0.16
TRA2A-209ENST00000494255 COPS6Q7L5N1 327 aa16.05■□□□□ 0.16
TRA2A-209ENST00000494255 LRP10Q7Z4F1 713 aa16.05■□□□□ 0.16
TRA2A-209ENST00000494255 XAGE3Q8WTP9 111 aa16.05■□□□□ 0.16
TRA2A-209ENST00000494255 BICDL1Q6ZP65 573 aa16.04■□□□□ 0.16
TRA2A-209ENST00000494255 KLHL34Q8N239 644 aa16.04■□□□□ 0.16
TRA2A-209ENST00000494255 VAMP4O75379 141 aa16.03■□□□□ 0.16
TRA2A-209ENST00000494255 TM4SF1P30408 202 aa16.03■□□□□ 0.16
TRA2A-209ENST00000494255 NFIXQ14938 502 aa16.03■□□□□ 0.16
TRA2A-209ENST00000494255 ZBTB3Q9H5J0 574 aa16.03■□□□□ 0.16
TRA2A-209ENST00000494255 TBC1D9BQ66K14 1250 aa16.02■□□□□ 0.16
TRA2A-209ENST00000494255 SETDB2Q96T68 719 aa16.02■□□□□ 0.16
TRA2A-209ENST00000494255 ZBED9Q6R2W3 1325 aa16.02■□□□□ 0.15
TRA2A-209ENST00000494255 TCERG1O14776 1098 aaKnown RBP16.02■□□□□ 0.15
TRA2A-209ENST00000494255 DDR1Q08345 913 aa16.02■□□□□ 0.15
TRA2A-209ENST00000494255 FHDC1Q9C0D6 1143 aaPredicted RBP16.02■□□□□ 0.15
TRA2A-209ENST00000494255 NUP98P52948 1817 aa16.01■□□□□ 0.15
TRA2A-209ENST00000494255 POLRMTO00411 1230 aaKnown RBP16.01■□□□□ 0.15
TRA2A-209ENST00000494255 HLFQ16534 295 aa16.01■□□□□ 0.15
TRA2A-209ENST00000494255 TRMT2AQ8IZ69 625 aaKnown RBP16.01■□□□□ 0.15
TRA2A-209ENST00000494255 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
TRA2A-209ENST00000494255 GIGYF2Q6Y7W6 1299 aaKnown RBP16■□□□□ 0.15
TRA2A-209ENST00000494255 NIP7Q9Y221 180 aaKnown RBP eCLIP16■□□□□ 0.15
TRA2A-209ENST00000494255 CACNA1FO60840 1977 aa16■□□□□ 0.15
TRA2A-209ENST00000494255 NPHP1O15259 732 aa15.99■□□□□ 0.15
TRA2A-209ENST00000494255 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
TRA2A-209ENST00000494255 SERPINB2P05120 415 aa15.99■□□□□ 0.15
TRA2A-209ENST00000494255 ANKRD13DQ6ZTN6 518 aa15.99■□□□□ 0.15
TRA2A-209ENST00000494255 PLBD2Q8NHP8 589 aa15.99■□□□□ 0.15
TRA2A-209ENST00000494255 PHAXQ9H814 394 aaKnown RBP15.99■□□□□ 0.15
TRA2A-209ENST00000494255 DDX58O95786 925 aaKnown RBP15.99■□□□□ 0.15
TRA2A-209ENST00000494255 HSP90AB3PQ58FF7 597 aa15.99■□□□□ 0.15
TRA2A-209ENST00000494255 CD2APQ9Y5K6 639 aa15.99■□□□□ 0.15
TRA2A-209ENST00000494255 ATP10DQ9P241 1426 aa15.98■□□□□ 0.15
TRA2A-209ENST00000494255 SYT17Q9BSW7 474 aa15.98■□□□□ 0.15
TRA2A-209ENST00000494255 AFDNP55196 1824 aaKnown RBP15.98■□□□□ 0.15
TRA2A-209ENST00000494255 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
TRA2A-209ENST00000494255 RIC3Q7Z5B4 369 aa15.97■□□□□ 0.15
TRA2A-209ENST00000494255 ZNF428Q96B54 188 aa15.97■□□□□ 0.15
TRA2A-209ENST00000494255 C10orf71Q711Q0 1435 aa15.96■□□□□ 0.15
TRA2A-209ENST00000494255 GPTP24298 496 aa15.96■□□□□ 0.15
TRA2A-209ENST00000494255 NBPF5PQ86XG9 351 aaPredicted RBP15.96■□□□□ 0.15
TRA2A-209ENST00000494255 CNBD1Q8NA66 436 aa15.96■□□□□ 0.15
TRA2A-209ENST00000494255 NRXN2Q9P2S2 1712 aa15.96■□□□□ 0.15
TRA2A-209ENST00000494255 ANKRD36CQ5JPF3 1778 aa15.95■□□□□ 0.14
TRA2A-209ENST00000494255 ARFGEF2Q9Y6D5 1785 aa15.95■□□□□ 0.14
TRA2A-209ENST00000494255 TCIRG1Q13488 830 aa15.95■□□□□ 0.14
TRA2A-209ENST00000494255 PARP10Q53GL7 1025 aa15.95■□□□□ 0.14
TRA2A-209ENST00000494255 ZNF34Q8IZ26 560 aa15.95■□□□□ 0.14
TRA2A-209ENST00000494255 KIF13BQ9NQT8 1826 aa15.95■□□□□ 0.14
TRA2A-209ENST00000494255 FAM177BA6PVY3 158 aa15.95■□□□□ 0.14
TRA2A-209ENST00000494255 FLIIQ13045 1269 aa15.95■□□□□ 0.14
TRA2A-209ENST00000494255 TPTE2Q6XPS3 522 aa15.95■□□□□ 0.14
TRA2A-209ENST00000494255 G2E3Q7L622 706 aa15.95■□□□□ 0.14
TRA2A-209ENST00000494255 NYXQ9GZU5 481 aa15.95■□□□□ 0.14
TRA2A-209ENST00000494255 ST5P78524 1137 aa15.94■□□□□ 0.14
TRA2A-209ENST00000494255 FKBP5Q13451 457 aaPredicted RBP15.94■□□□□ 0.14
TRA2A-209ENST00000494255 PPP1R42Q7Z4L9 355 aa15.94■□□□□ 0.14
TRA2A-209ENST00000494255 GTF2E1P29083 439 aaPredicted RBP15.93■□□□□ 0.14
TRA2A-209ENST00000494255 PRR5LQ6MZQ0 368 aa15.93■□□□□ 0.14
TRA2A-209ENST00000494255 KSR2Q6VAB6 950 aa15.93■□□□□ 0.14
TRA2A-209ENST00000494255 NLGN2Q8NFZ4 835 aa15.93■□□□□ 0.14
TRA2A-209ENST00000494255 UBN2Q6ZU65 1347 aa15.93■□□□□ 0.14
TRA2A-209ENST00000494255 PI4KAP2A4QPH2 592 aa15.92■□□□□ 0.14
TRA2A-209ENST00000494255 TGFB2P61812 414 aa15.92■□□□□ 0.14
TRA2A-209ENST00000494255 ALDH1L2Q3SY69 923 aa15.92■□□□□ 0.14
TRA2A-209ENST00000494255 PI4KAP1Q8N8J0 262 aa15.92■□□□□ 0.14
TRA2A-209ENST00000494255 MAP3K2Q9Y2U5 619 aa15.92■□□□□ 0.14
TRA2A-209ENST00000494255 IBTKQ9P2D0 1353 aaPredicted RBP15.92■□□□□ 0.14
TRA2A-209ENST00000494255 SSH1Q8WYL5 1049 aa15.92■□□□□ 0.14
TRA2A-209ENST00000494255 METTL22Q9BUU2 404 aaPredicted RBP15.92■□□□□ 0.14
TRA2A-209ENST00000494255 SMC4Q9NTJ3 1288 aa15.92■□□□□ 0.14
TRA2A-209ENST00000494255 ADCY9O60503 1353 aa15.91■□□□□ 0.14
TRA2A-209ENST00000494255 NEXNQ0ZGT2 675 aa15.91■□□□□ 0.14
TRA2A-209ENST00000494255 SUSD4Q5VX71 490 aa15.91■□□□□ 0.14
TRA2A-209ENST00000494255 MYD88Q99836 296 aa15.91■□□□□ 0.14
TRA2A-209ENST00000494255 UTP14AQ9BVJ6 771 aaKnown RBP15.91■□□□□ 0.14
TRA2A-209ENST00000494255 BRIP1Q9BX63 1249 aa15.91■□□□□ 0.14
TRA2A-209ENST00000494255 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
TRA2A-209ENST00000494255 ATP5J2-PTCD1G3V325 749 aa15.9■□□□□ 0.14
TRA2A-209ENST00000494255 PDE6BP35913 854 aa15.9■□□□□ 0.14
TRA2A-209ENST00000494255 NLRP10Q86W26 655 aa15.9■□□□□ 0.14
TRA2A-209ENST00000494255 CCDC24Q8N4L8 307 aa15.9■□□□□ 0.14
TRA2A-209ENST00000494255 MRPL50Q8N5N7 158 aaKnown RBP15.9■□□□□ 0.14
TRA2A-209ENST00000494255 ISCA1Q9BUE6 129 aa15.9■□□□□ 0.14
TRA2A-209ENST00000494255 BCL2L13Q9BXK5 485 aa15.9■□□□□ 0.14
TRA2A-209ENST00000494255 PXDNLA1KZ92 1463 aa15.9■□□□□ 0.14
TRA2A-209ENST00000494255 N4BP2Q86UW6 1770 aaPredicted RBP15.89■□□□□ 0.14
TRA2A-209ENST00000494255 YTHDC1Q96MU7 727 aaKnown RBP15.89■□□□□ 0.13
TRA2A-209ENST00000494255 RNF123Q5XPI4 1314 aa15.89■□□□□ 0.13
TRA2A-209ENST00000494255 A0A0G2JLW4 131 aa15.89■□□□□ 0.13
TRA2A-209ENST00000494255 NTSR2O95665 410 aa15.89■□□□□ 0.13
TRA2A-209ENST00000494255 TRIM28Q13263 835 aaKnown RBP15.89■□□□□ 0.13
TRA2A-209ENST00000494255 NUTM1Q86Y26 1132 aa15.89■□□□□ 0.13
TRA2A-209ENST00000494255 DNAAF4Q8WXU2 420 aa15.89■□□□□ 0.13
TRA2A-209ENST00000494255 TRMT112Q9UI30 125 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms