RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 HDAC1Q13547 482 aaPredicted RBP13.68□□□□□ -0.22
COL25A1-204ENST00000494183 TTC22Q5TAA0 569 aa13.68□□□□□ -0.22
COL25A1-204ENST00000494183 CEP57L1Q8IYX8 460 aa13.68□□□□□ -0.22
COL25A1-204ENST00000494183 LINS1Q8NG48 757 aa13.68□□□□□ -0.22
COL25A1-204ENST00000494183 ZNF622Q969S3 477 aaKnown RBP eCLIP13.68□□□□□ -0.22
COL25A1-204ENST00000494183 ALDH1L1O75891 902 aa13.68□□□□□ -0.22
COL25A1-204ENST00000494183 TANGO6Q9C0B7 1094 aa13.68□□□□□ -0.22
COL25A1-204ENST00000494183 SEC63Q9UGP8 760 aaKnown RBP13.68□□□□□ -0.22
COL25A1-204ENST00000494183 DACH1Q9UI36 760 aa13.68□□□□□ -0.22
COL25A1-204ENST00000494183 HOXC9P31274 260 aa13.67□□□□□ -0.22
COL25A1-204ENST00000494183 EIF4G3O43432 1585 aaKnown RBP13.67□□□□□ -0.22
COL25A1-204ENST00000494183 TTF1Q15361 905 aaPredicted RBP13.67□□□□□ -0.22
COL25A1-204ENST00000494183 FILIP1Q7Z7B0 1213 aa13.67□□□□□ -0.22
COL25A1-204ENST00000494183 IP6K1Q92551 441 aa13.67□□□□□ -0.22
COL25A1-204ENST00000494183 ZNHIT6Q9NWK9 470 aaKnown RBP13.67□□□□□ -0.22
COL25A1-204ENST00000494183 GOLGA8BA8MQT2 603 aa13.67□□□□□ -0.22
COL25A1-204ENST00000494183 CAMK4Q16566 473 aa13.67□□□□□ -0.22
COL25A1-204ENST00000494183 CCDC152Q4G0S7 254 aa13.67□□□□□ -0.22
COL25A1-204ENST00000494183 SETDB2Q96T68 719 aa13.67□□□□□ -0.22
COL25A1-204ENST00000494183 LDHCP07864 332 aa13.67□□□□□ -0.22
COL25A1-204ENST00000494183 SDSP20132 328 aa13.67□□□□□ -0.22
COL25A1-204ENST00000494183 TNNT3P45378 269 aaPredicted RBP13.67□□□□□ -0.22
COL25A1-204ENST00000494183 CWF19L2Q2TBE0 894 aaKnown RBP13.67□□□□□ -0.22
COL25A1-204ENST00000494183 GRPEL1Q9HAV7 217 aa13.67□□□□□ -0.22
COL25A1-204ENST00000494183 NIP7Q9Y221 180 aaKnown RBP eCLIP13.67□□□□□ -0.22
COL25A1-204ENST00000494183 PPFIBP1Q86W92 1011 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 NLRP3Q96P20 1036 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 SCAND2PQ9GZW5 306 aaPredicted RBP13.66□□□□□ -0.22
COL25A1-204ENST00000494183 PA2G4Q9UQ80 394 aaKnown RBP13.66□□□□□ -0.22
COL25A1-204ENST00000494183 CTTNBP2Q8WZ74 1663 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 RLBP1P12271 317 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 PDE1AP54750 535 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 NUCB1Q02818 461 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 ATP2B3Q16720 1220 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 SYCE3A1L190 88 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 HMGN5P82970 282 aaKnown RBP13.66□□□□□ -0.22
COL25A1-204ENST00000494183 ATP8B2P98198 1209 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 SLF2Q8IX21 1173 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 CAGE1Q8TC20 777 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 SMARCC1Q92922 1105 aaPredicted RBP13.66□□□□□ -0.22
COL25A1-204ENST00000494183 SIRT1Q96EB6 747 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 DCAF5Q96JK2 942 aa13.66□□□□□ -0.22
COL25A1-204ENST00000494183 CCDC173Q0VFZ6 552 aa13.65□□□□□ -0.22
COL25A1-204ENST00000494183 DHX8Q14562 1220 aaKnown RBP13.65□□□□□ -0.22
COL25A1-204ENST00000494183 CCDC96Q2M329 555 aa13.65□□□□□ -0.22
COL25A1-204ENST00000494183 PDCL3Q9H2J4 239 aa13.65□□□□□ -0.22
COL25A1-204ENST00000494183 MAP3K11Q16584 847 aa13.65□□□□□ -0.22
COL25A1-204ENST00000494183 SLC4A8Q2Y0W8 1093 aa13.65□□□□□ -0.22
COL25A1-204ENST00000494183 GOLGA8AA7E2F4 631 aa13.65□□□□□ -0.22
COL25A1-204ENST00000494183 SYCP1Q15431 976 aa13.65□□□□□ -0.22
COL25A1-204ENST00000494183 ANKRD18AQ8IVF6 992 aa13.65□□□□□ -0.22
COL25A1-204ENST00000494183 C16orf71Q8IYS4 520 aaPredicted RBP13.65□□□□□ -0.22
COL25A1-204ENST00000494183 ARGLU1Q9NWB6 273 aaPredicted RBP13.65□□□□□ -0.22
COL25A1-204ENST00000494183 WWC2Q6AWC2 1192 aa13.65□□□□□ -0.22
COL25A1-204ENST00000494183 MICU3Q86XE3 530 aa13.65□□□□□ -0.22
COL25A1-204ENST00000494183 BTG4Q9NY30 223 aa13.65□□□□□ -0.22
COL25A1-204ENST00000494183 TFIP11Q9UBB9 837 aaKnown RBP13.65□□□□□ -0.22
COL25A1-204ENST00000494183 RAB11FIP4Q86YS3 637 aa13.64□□□□□ -0.23
COL25A1-204ENST00000494183 CCDC144CPQ8IYA2 1237 aa13.64□□□□□ -0.23
COL25A1-204ENST00000494183 CEP131Q9UPN4 1083 aa13.64□□□□□ -0.23
COL25A1-204ENST00000494183 USP16Q9Y5T5 823 aa13.64□□□□□ -0.23
COL25A1-204ENST00000494183 SHANK2Q9UPX8 1470 aa13.64□□□□□ -0.23
COL25A1-204ENST00000494183 ABCC1P33527 1531 aa13.64□□□□□ -0.23
COL25A1-204ENST00000494183 TSPY2A6NKD2 308 aa13.64□□□□□ -0.23
COL25A1-204ENST00000494183 BAG3O95817 575 aa13.64□□□□□ -0.23
COL25A1-204ENST00000494183 SSFA2P28290 1259 aa13.64□□□□□ -0.23
COL25A1-204ENST00000494183 NEK1Q96PY6 1258 aa13.64□□□□□ -0.23
COL25A1-204ENST00000494183 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
COL25A1-204ENST00000494183 TCEANC2Q96MN5 208 aa13.64□□□□□ -0.23
COL25A1-204ENST00000494183 DZIP3Q86Y13 1208 aaKnown RBP13.63□□□□□ -0.23
COL25A1-204ENST00000494183 PHAXQ9H814 394 aaKnown RBP13.63□□□□□ -0.23
COL25A1-204ENST00000494183 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
COL25A1-204ENST00000494183 UQCRFS1P1P0C7P4 283 aa13.63□□□□□ -0.23
COL25A1-204ENST00000494183 TMEM67Q5HYA8 995 aa13.63□□□□□ -0.23
COL25A1-204ENST00000494183 CATIPQ7Z7H3 387 aa13.63□□□□□ -0.23
COL25A1-204ENST00000494183 RUFY1Q96T51 708 aa13.63□□□□□ -0.23
COL25A1-204ENST00000494183 PZPP20742 1482 aa13.63□□□□□ -0.23
COL25A1-204ENST00000494183 DEF6Q9H4E7 631 aa13.63□□□□□ -0.23
COL25A1-204ENST00000494183 IL15P40933 162 aaPredicted RBP13.63□□□□□ -0.23
COL25A1-204ENST00000494183 MFSD6Q6ZSS7 791 aa13.63□□□□□ -0.23
COL25A1-204ENST00000494183 FAM177A1Q8N128 213 aaPredicted RBP13.62□□□□□ -0.23
COL25A1-204ENST00000494183 IARSP41252 1262 aaKnown RBP13.62□□□□□ -0.23
COL25A1-204ENST00000494183 STX8Q9UNK0 236 aa13.62□□□□□ -0.23
COL25A1-204ENST00000494183 KIF21AQ7Z4S6 1674 aa13.62□□□□□ -0.23
COL25A1-204ENST00000494183 MAP3K5Q99683 1374 aa13.62□□□□□ -0.23
COL25A1-204ENST00000494183 RNMTO43148 476 aaKnown RBP13.62□□□□□ -0.23
COL25A1-204ENST00000494183 HELBQ8NG08 1087 aaPredicted RBP13.62□□□□□ -0.23
COL25A1-204ENST00000494183 VAT1LQ9HCJ6 419 aa13.62□□□□□ -0.23
COL25A1-204ENST00000494183 NOM1Q5C9Z4 860 aaKnown RBP13.62□□□□□ -0.23
COL25A1-204ENST00000494183 BRF1Q92994 677 aa13.62□□□□□ -0.23
COL25A1-204ENST00000494183 ORC3Q9UBD5 711 aaPredicted RBP13.62□□□□□ -0.23
COL25A1-204ENST00000494183 UHRF1BP1Q6BDS2 1440 aa13.62□□□□□ -0.23
COL25A1-204ENST00000494183 CCDC194A0A1B0GVG4 234 aa13.61□□□□□ -0.23
COL25A1-204ENST00000494183 NLRP5P59047 1200 aa13.61□□□□□ -0.23
COL25A1-204ENST00000494183 ST5P78524 1137 aa13.61□□□□□ -0.23
COL25A1-204ENST00000494183 PDE4BQ07343 736 aa13.61□□□□□ -0.23
COL25A1-204ENST00000494183 SSRP1Q08945 709 aaKnown RBP13.61□□□□□ -0.23
COL25A1-204ENST00000494183 WDR78Q5VTH9 848 aa13.61□□□□□ -0.23
COL25A1-204ENST00000494183 SPTY2D1Q68D10 685 aaPredicted RBP13.61□□□□□ -0.23
COL25A1-204ENST00000494183 KLHL10Q6JEL2 608 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms