RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ANKRD13DQ6ZTN6 518 aa14.44□□□□□ -0.1
MCF2L-231ENST00000494043 PLBD2Q8NHP8 589 aa14.44□□□□□ -0.1
MCF2L-231ENST00000494043 DDX19BQ9UMR2 479 aa14.44□□□□□ -0.1
MCF2L-231ENST00000494043 ZNF330Q9Y3S2 320 aaPredicted RBP14.44□□□□□ -0.1
MCF2L-231ENST00000494043 NUP188Q5SRE5 1749 aa14.44□□□□□ -0.1
MCF2L-231ENST00000494043 ARFGEF2Q9Y6D5 1785 aa14.43□□□□□ -0.1
MCF2L-231ENST00000494043 MSH5O43196 834 aa14.43□□□□□ -0.1
MCF2L-231ENST00000494043 KIF6Q6ZMV9 814 aa14.43□□□□□ -0.1
MCF2L-231ENST00000494043 RIC3Q7Z5B4 369 aa14.43□□□□□ -0.1
MCF2L-231ENST00000494043 PROM2Q8N271 834 aa14.43□□□□□ -0.1
MCF2L-231ENST00000494043 HMGB2P26583 209 aaKnown RBP14.42□□□□□ -0.1
MCF2L-231ENST00000494043 BEND3Q5T5X7 828 aa14.42□□□□□ -0.1
MCF2L-231ENST00000494043 NPM2Q86SE8 214 aaKnown RBP14.42□□□□□ -0.1
MCF2L-231ENST00000494043 COL15A1P39059 1388 aa14.42□□□□□ -0.1
MCF2L-231ENST00000494043 MAP3K15Q6ZN16 1313 aa14.41□□□□□ -0.1
MCF2L-231ENST00000494043 GNPATO15228 680 aa14.41□□□□□ -0.1
MCF2L-231ENST00000494043 AAMPQ13685 434 aa14.41□□□□□ -0.1
MCF2L-231ENST00000494043 METTL22Q9BUU2 404 aaPredicted RBP14.41□□□□□ -0.1
MCF2L-231ENST00000494043 SRCIN1Q9C0H9 1055 aa14.41□□□□□ -0.1
MCF2L-231ENST00000494043 CHMP4BQ9H444 224 aaKnown RBP14.41□□□□□ -0.1
MCF2L-231ENST00000494043 ZBTB3Q9H5J0 574 aa14.41□□□□□ -0.1
MCF2L-231ENST00000494043 IBTKQ9P2D0 1353 aaPredicted RBP14.4□□□□□ -0.1
MCF2L-231ENST00000494043 A0A087WZG4 1122 aa14.4□□□□□ -0.1
MCF2L-231ENST00000494043 ZBTB7BO15156 539 aaPredicted RBP14.4□□□□□ -0.1
MCF2L-231ENST00000494043 RPS6KA4O75676 772 aa14.4□□□□□ -0.1
MCF2L-231ENST00000494043 ALDH1L1O75891 902 aa14.4□□□□□ -0.1
MCF2L-231ENST00000494043 NEXNQ0ZGT2 675 aa14.4□□□□□ -0.1
MCF2L-231ENST00000494043 SF3B2Q13435 895 aaKnown RBP14.4□□□□□ -0.1
MCF2L-231ENST00000494043 DZIP3Q86Y13 1208 aaKnown RBP14.4□□□□□ -0.1
MCF2L-231ENST00000494043 AK7Q96M32 723 aa14.4□□□□□ -0.1
MCF2L-231ENST00000494043 ERVV-1B6SEH8 477 aa14.39□□□□□ -0.11
MCF2L-231ENST00000494043 LINS1Q8NG48 757 aa14.39□□□□□ -0.11
MCF2L-231ENST00000494043 CAMKK2Q96RR4 588 aa14.39□□□□□ -0.11
MCF2L-231ENST00000494043 MYD88Q99836 296 aa14.39□□□□□ -0.11
MCF2L-231ENST00000494043 ZBTB40Q9NUA8 1239 aa14.39□□□□□ -0.11
MCF2L-231ENST00000494043 PPP4R2Q9NY27 417 aa14.39□□□□□ -0.11
MCF2L-231ENST00000494043 TBC1D2BQ9UPU7 963 aa14.39□□□□□ -0.11
MCF2L-231ENST00000494043 RTCBQ9Y3I0 505 aaKnown RBP14.39□□□□□ -0.11
MCF2L-231ENST00000494043 IGKV5-2P06315 115 aa14.38□□□□□ -0.11
MCF2L-231ENST00000494043 BAG6P46379 1132 aa14.38□□□□□ -0.11
MCF2L-231ENST00000494043 ARXQ96QS3 562 aa14.38□□□□□ -0.11
MCF2L-231ENST00000494043 BCORQ6W2J9 1755 aa14.37□□□□□ -0.11
MCF2L-231ENST00000494043 SCN7AQ01118 1682 aa14.37□□□□□ -0.11
MCF2L-231ENST00000494043 NEURL1BA8MQ27 555 aa14.37□□□□□ -0.11
MCF2L-231ENST00000494043 CAMTA2O94983 1202 aa14.37□□□□□ -0.11
MCF2L-231ENST00000494043 EN1Q05925 392 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-231ENST00000494043 CWF19L2Q2TBE0 894 aaKnown RBP14.37□□□□□ -0.11
MCF2L-231ENST00000494043 GIGYF2Q6Y7W6 1299 aaKnown RBP14.37□□□□□ -0.11
MCF2L-231ENST00000494043 AMIGO3Q86WK7 504 aa14.37□□□□□ -0.11
MCF2L-231ENST00000494043 CCDC125Q86Z20 511 aa14.37□□□□□ -0.11
MCF2L-231ENST00000494043 MEIS3Q99687 375 aa14.37□□□□□ -0.11
MCF2L-231ENST00000494043 UBR3Q6ZT12 1888 aa14.37□□□□□ -0.11
MCF2L-231ENST00000494043 GNAI3P08754 354 aa14.36□□□□□ -0.11
MCF2L-231ENST00000494043 TCIRG1Q13488 830 aa14.36□□□□□ -0.11
MCF2L-231ENST00000494043 EZH2Q15910 746 aaKnown RBP14.36□□□□□ -0.11
MCF2L-231ENST00000494043 HLFQ16534 295 aa14.36□□□□□ -0.11
MCF2L-231ENST00000494043 HSP90AB3PQ58FF7 597 aa14.36□□□□□ -0.11
MCF2L-231ENST00000494043 USP44Q9H0E7 712 aa14.36□□□□□ -0.11
MCF2L-231ENST00000494043 ANKRD36CQ5JPF3 1778 aa14.35□□□□□ -0.11
MCF2L-231ENST00000494043 ATP5J2-PTCD1G3V325 749 aa14.35□□□□□ -0.11
MCF2L-231ENST00000494043 RGL2O15211 777 aa14.35□□□□□ -0.11
MCF2L-231ENST00000494043 SSFA2P28290 1259 aa14.35□□□□□ -0.11
MCF2L-231ENST00000494043 GCKRQ14397 625 aa14.35□□□□□ -0.11
MCF2L-231ENST00000494043 ZNF827Q17R98 1081 aa14.35□□□□□ -0.11
MCF2L-231ENST00000494043 SMIM5Q71RC9 77 aa14.35□□□□□ -0.11
MCF2L-231ENST00000494043 AKT1S1Q96B36 256 aa14.35□□□□□ -0.11
MCF2L-231ENST00000494043 ISCA1Q9BUE6 129 aa14.35□□□□□ -0.11
MCF2L-231ENST00000494043 C4AP0C0L4 1744 aa14.35□□□□□ -0.11
MCF2L-231ENST00000494043 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
MCF2L-231ENST00000494043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.34□□□□□ -0.11
MCF2L-231ENST00000494043 PHF14O94880 888 aa14.34□□□□□ -0.11
MCF2L-231ENST00000494043 TRIM28Q13263 835 aaKnown RBP14.34□□□□□ -0.11
MCF2L-231ENST00000494043 TRAPPC3LQ5T215 181 aa14.34□□□□□ -0.11
MCF2L-231ENST00000494043 DEFB132Q7Z7B7 95 aa14.34□□□□□ -0.11
MCF2L-231ENST00000494043 CCDC191Q8NCU4 936 aa14.34□□□□□ -0.11
MCF2L-231ENST00000494043 ARHGEF1Q92888 912 aaKnown RBP14.34□□□□□ -0.11
MCF2L-231ENST00000494043 NARFQ9UHQ1 456 aa14.34□□□□□ -0.11
MCF2L-231ENST00000494043 UTYO14607 1347 aa14.34□□□□□ -0.11
MCF2L-231ENST00000494043 GRM8O00222 908 aa14.33□□□□□ -0.12
MCF2L-231ENST00000494043 UBTFL1P0CB47 393 aaPredicted RBP14.33□□□□□ -0.12
MCF2L-231ENST00000494043 ILDR2Q71H61 639 aa14.33□□□□□ -0.12
MCF2L-231ENST00000494043 CCDC136Q96JN2 1154 aa14.33□□□□□ -0.12
MCF2L-231ENST00000494043 C1orf115Q9H7X2 142 aa14.33□□□□□ -0.12
MCF2L-231ENST00000494043 CWC25Q9NXE8 425 aaPredicted RBP14.33□□□□□ -0.12
MCF2L-231ENST00000494043 C9orf78Q9NZ63 289 aaPredicted RBP14.33□□□□□ -0.12
MCF2L-231ENST00000494043 ZNF652Q9Y2D9 606 aa14.33□□□□□ -0.12
MCF2L-231ENST00000494043 PCDHB15Q9Y5E8 787 aa14.33□□□□□ -0.12
MCF2L-231ENST00000494043 NUP98P52948 1817 aa14.33□□□□□ -0.12
MCF2L-231ENST00000494043 USP42Q9H9J4 1324 aaKnown RBP14.33□□□□□ -0.12
MCF2L-231ENST00000494043 ZPR1O75312 459 aa14.32□□□□□ -0.12
MCF2L-231ENST00000494043 GNAI2P04899 355 aa14.32□□□□□ -0.12
MCF2L-231ENST00000494043 NBPF7P0C2Y1 421 aaPredicted RBP14.32□□□□□ -0.12
MCF2L-231ENST00000494043 RFC4P35249 363 aa14.32□□□□□ -0.12
MCF2L-231ENST00000494043 USPL1Q5W0Q7 1092 aa14.32□□□□□ -0.12
MCF2L-231ENST00000494043 B4GALNT3Q6L9W6 998 aa14.32□□□□□ -0.12
MCF2L-231ENST00000494043 CLEC4GQ6UXB4 293 aa14.32□□□□□ -0.12
MCF2L-231ENST00000494043 ZNF34Q8IZ26 560 aa14.32□□□□□ -0.12
MCF2L-231ENST00000494043 SRP68Q9UHB9 627 aaKnown RBP14.32□□□□□ -0.12
MCF2L-231ENST00000494043 TUBGCP6Q96RT7 1819 aa14.31□□□□□ -0.12
MCF2L-231ENST00000494043 GPTP24298 496 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms