RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SYNMO15061 1565 aa8.1□□□□□ -1.11
CPSF7-213ENST00000494016 LRPPRCP42704 1394 aaKnown RBP8.1□□□□□ -1.11
CPSF7-213ENST00000494016 ABL2P42684 1182 aa8.09□□□□□ -1.11
CPSF7-213ENST00000494016 IDI1Q13907 227 aa8.09□□□□□ -1.11
CPSF7-213ENST00000494016 CDK15Q96Q40 435 aa8.09□□□□□ -1.11
CPSF7-213ENST00000494016 LTBP4Q8N2S1 1624 aa8.08□□□□□ -1.12
CPSF7-213ENST00000494016 TTC24A2A3L6 582 aaPredicted RBP8.08□□□□□ -1.12
CPSF7-213ENST00000494016 UBAP1LF5GYI3 381 aa8.08□□□□□ -1.12
CPSF7-213ENST00000494016 ESF1Q9H501 851 aaKnown RBP8.08□□□□□ -1.12
CPSF7-213ENST00000494016 TLL2Q9Y6L7 1015 aa8.08□□□□□ -1.12
CPSF7-213ENST00000494016 A2ML1A8K2U0 1454 aa8.07□□□□□ -1.12
CPSF7-213ENST00000494016 SETBP1Q9Y6X0 1596 aa8.07□□□□□ -1.12
CPSF7-213ENST00000494016 PIK3C2GO75747 1445 aa8.07□□□□□ -1.12
CPSF7-213ENST00000494016 SMPD1P17405 629 aa8.07□□□□□ -1.12
CPSF7-213ENST00000494016 CDCA8Q53HL2 280 aa8.07□□□□□ -1.12
CPSF7-213ENST00000494016 CC2D1BQ5T0F9 858 aaKnown RBP8.07□□□□□ -1.12
CPSF7-213ENST00000494016 NLRP13Q86W25 1043 aa8.07□□□□□ -1.12
CPSF7-213ENST00000494016 MAP4K5Q9Y4K4 846 aa8.07□□□□□ -1.12
CPSF7-213ENST00000494016 ERVK-7P63135 1459 aa8.06□□□□□ -1.12
CPSF7-213ENST00000494016 J3QL48 77 aa8.06□□□□□ -1.12
CPSF7-213ENST00000494016 ST8SIA5O15466 376 aa8.06□□□□□ -1.12
CPSF7-213ENST00000494016 ALDH1A1P00352 501 aa8.06□□□□□ -1.12
CPSF7-213ENST00000494016 WASHC4Q2M389 1173 aa8.06□□□□□ -1.12
CPSF7-213ENST00000494016 TMEM132EQ6IEE7 984 aa8.06□□□□□ -1.12
CPSF7-213ENST00000494016 CLUAP1Q96AJ1 413 aa8.06□□□□□ -1.12
CPSF7-213ENST00000494016 SLC10A4Q96EP9 437 aa8.06□□□□□ -1.12
CPSF7-213ENST00000494016 SLC52A1Q9NWF4 448 aa8.06□□□□□ -1.12
CPSF7-213ENST00000494016 EIF3AQ14152 1382 aaKnown RBP8.06□□□□□ -1.12
CPSF7-213ENST00000494016 ADGRB1O14514 1584 aa8.05□□□□□ -1.12
CPSF7-213ENST00000494016 MYOM1P52179 1685 aa8.05□□□□□ -1.12
CPSF7-213ENST00000494016 NEXMIFQ5QGS0 1516 aa8.05□□□□□ -1.12
CPSF7-213ENST00000494016 LOC100996750A0A140TA64 210 aa8.05□□□□□ -1.12
CPSF7-213ENST00000494016 A6NJR5 290 aa8.05□□□□□ -1.12
CPSF7-213ENST00000494016 WFS1O76024 890 aa8.05□□□□□ -1.12
CPSF7-213ENST00000494016 NEFLP07196 543 aa8.05□□□□□ -1.12
CPSF7-213ENST00000494016 KRTAP4-6Q9BYQ5 205 aa8.05□□□□□ -1.12
CPSF7-213ENST00000494016 CDV3Q9UKY7 258 aaKnown RBP8.05□□□□□ -1.12
CPSF7-213ENST00000494016 TRAK1Q9UPV9 953 aa8.05□□□□□ -1.12
CPSF7-213ENST00000494016 ZNF330Q9Y3S2 320 aaPredicted RBP8.05□□□□□ -1.12
CPSF7-213ENST00000494016 TNRQ92752 1358 aa8.05□□□□□ -1.12
CPSF7-213ENST00000494016 MYO5BQ9ULV0 1848 aa8.05□□□□□ -1.12
CPSF7-213ENST00000494016 ZFYVE9O95405 1425 aa8.04□□□□□ -1.12
CPSF7-213ENST00000494016 SMG6Q86US8 1419 aaKnown RBP8.04□□□□□ -1.12
CPSF7-213ENST00000494016 ADH1CP00326 375 aa8.04□□□□□ -1.12
CPSF7-213ENST00000494016 GRM5P41594 1212 aa8.04□□□□□ -1.12
CPSF7-213ENST00000494016 VAC14Q08AM6 782 aa8.04□□□□□ -1.12
CPSF7-213ENST00000494016 ARID5BQ14865 1188 aa8.04□□□□□ -1.12
CPSF7-213ENST00000494016 DZIP3Q86Y13 1208 aaKnown RBP8.04□□□□□ -1.12
CPSF7-213ENST00000494016 WWC1Q8IX03 1113 aa8.04□□□□□ -1.12
CPSF7-213ENST00000494016 AAASQ9NRG9 546 aa8.04□□□□□ -1.12
CPSF7-213ENST00000494016 KNSTRNQ9Y448 316 aa8.04□□□□□ -1.12
CPSF7-213ENST00000494016 SBNO2Q9Y2G9 1366 aa8.04□□□□□ -1.12
CPSF7-213ENST00000494016 KDM5AP29375 1690 aaKnown RBP8.04□□□□□ -1.12
CPSF7-213ENST00000494016 CENPJQ9HC77 1338 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-213ENST00000494016 TMEM131LA2VDJ0 1609 aa8.03□□□□□ -1.12
CPSF7-213ENST00000494016 UBR1Q8IWV7 1749 aa8.03□□□□□ -1.12
CPSF7-213ENST00000494016 IQSEC2Q5JU85 1478 aa8.03□□□□□ -1.12
CPSF7-213ENST00000494016 NPC1L1Q9UHC9 1359 aa8.03□□□□□ -1.12
CPSF7-213ENST00000494016 SENP3-EIF4A1A0A087X0R7 540 aa8.03□□□□□ -1.12
CPSF7-213ENST00000494016 PPP2R1AP30153 589 aa8.03□□□□□ -1.12
CPSF7-213ENST00000494016 MCCD1P59942 119 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-213ENST00000494016 INSM1Q01101 510 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-213ENST00000494016 ERICH6BQ5W0A0 696 aa8.03□□□□□ -1.12
CPSF7-213ENST00000494016 VASH1Q7L8A9 365 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-213ENST00000494016 FNBP4Q8N3X1 1017 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-213ENST00000494016 PCDHB9Q9Y5E1 797 aa8.03□□□□□ -1.12
CPSF7-213ENST00000494016 WASF2Q9Y6W5 498 aa8.03□□□□□ -1.12
CPSF7-213ENST00000494016 INSRP06213 1382 aa8.02□□□□□ -1.13
CPSF7-213ENST00000494016 IRX6P78412 446 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-213ENST00000494016 NR5A1Q13285 461 aa8.02□□□□□ -1.13
CPSF7-213ENST00000494016 PROSER2Q86WR7 435 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-213ENST00000494016 ZNF592Q92610 1267 aa8.02□□□□□ -1.13
CPSF7-213ENST00000494016 NUDCQ9Y266 331 aa8.02□□□□□ -1.13
CPSF7-213ENST00000494016 ASXL1Q8IXJ9 1541 aa8.02□□□□□ -1.13
CPSF7-213ENST00000494016 RNF123Q5XPI4 1314 aa8.02□□□□□ -1.13
CPSF7-213ENST00000494016 NLRP1Q9C000 1473 aa8.01□□□□□ -1.13
CPSF7-213ENST00000494016 AVPP01185 164 aa8.01□□□□□ -1.13
CPSF7-213ENST00000494016 NBPF20Q3BBV1 942 aa8.01□□□□□ -1.13
CPSF7-213ENST00000494016 PUS7Q96PZ0 661 aaKnown RBP8.01□□□□□ -1.13
CPSF7-213ENST00000494016 KCTD15Q96SI1 283 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-213ENST00000494016 STRCP1A6NGW2 1772 aa8.01□□□□□ -1.13
CPSF7-213ENST00000494016 QRICH2Q9H0J4 1663 aa8.01□□□□□ -1.13
CPSF7-213ENST00000494016 ZNF335Q9H4Z2 1342 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-213ENST00000494016 ESPNB1AK53 854 aa8□□□□□ -1.13
CPSF7-213ENST00000494016 FSHRP23945 695 aa8□□□□□ -1.13
CPSF7-213ENST00000494016 HSPA1LP34931 641 aa8□□□□□ -1.13
CPSF7-213ENST00000494016 NNTQ13423 1086 aa8□□□□□ -1.13
CPSF7-213ENST00000494016 HPS1Q92902 700 aa8□□□□□ -1.13
CPSF7-213ENST00000494016 ADAMTS8Q9UP79 889 aa8□□□□□ -1.13
CPSF7-213ENST00000494016 NR3C2P08235 984 aa7.99□□□□□ -1.13
CPSF7-213ENST00000494016 SOX11P35716 441 aa7.99□□□□□ -1.13
CPSF7-213ENST00000494016 PIP4K2BP78356 416 aa7.99□□□□□ -1.13
CPSF7-213ENST00000494016 ARHGEF28Q8N1W1 1705 aaKnown RBP7.99□□□□□ -1.13
CPSF7-213ENST00000494016 SLC12A5Q9H2X9 1139 aa7.99□□□□□ -1.13
CPSF7-213ENST00000494016 BLMP54132 1417 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-213ENST00000494016 PDE3BQ13370 1112 aa7.98□□□□□ -1.13
CPSF7-213ENST00000494016 INTS6LQ5JSJ4 861 aaKnown RBP7.98□□□□□ -1.13
CPSF7-213ENST00000494016 PPP4R2Q9NY27 417 aa7.98□□□□□ -1.13
CPSF7-213ENST00000494016 POM121CA8CG34 1229 aa7.97□□□□□ -1.13
CPSF7-213ENST00000494016 GIGYF1O75420 1035 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms