RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 ZNF827Q17R98 1081 aa18.95■□□□□ 0.62
ACTB-213ENST00000493945 PROSER3Q2NL68 480 aa18.95■□□□□ 0.62
ACTB-213ENST00000493945 ANKRD13DQ6ZTN6 518 aa18.95■□□□□ 0.62
ACTB-213ENST00000493945 FTSJ3Q8IY81 847 aaKnown RBP18.95■□□□□ 0.62
ACTB-213ENST00000493945 PLBD2Q8NHP8 589 aa18.95■□□□□ 0.62
ACTB-213ENST00000493945 ARFGEF2Q9Y6D5 1785 aa18.95■□□□□ 0.62
ACTB-213ENST00000493945 PXDNLA1KZ92 1463 aa18.95■□□□□ 0.62
ACTB-213ENST00000493945 MAP3K15Q6ZN16 1313 aa18.95■□□□□ 0.62
ACTB-213ENST00000493945 ANXA1P04083 346 aa18.94■□□□□ 0.62
ACTB-213ENST00000493945 KSR2Q6VAB6 950 aa18.94■□□□□ 0.62
ACTB-213ENST00000493945 NARFQ9UHQ1 456 aa18.94■□□□□ 0.62
ACTB-213ENST00000493945 CLEC4GQ6UXB4 293 aa18.93■□□□□ 0.62
ACTB-213ENST00000493945 PHAXQ9H814 394 aaKnown RBP18.93■□□□□ 0.62
ACTB-213ENST00000493945 USP42Q9H9J4 1324 aaKnown RBP18.93■□□□□ 0.62
ACTB-213ENST00000493945 ANKRD36CQ5JPF3 1778 aa18.93■□□□□ 0.62
ACTB-213ENST00000493945 BCAR3O75815 825 aa18.92■□□□□ 0.62
ACTB-213ENST00000493945 ATF7IPQ6VMQ6 1270 aa18.92■□□□□ 0.62
ACTB-213ENST00000493945 ANO8Q9HCE9 1232 aaPredicted RBP18.92■□□□□ 0.62
ACTB-213ENST00000493945 NOB1Q9ULX3 412 aaKnown RBP18.92■□□□□ 0.62
ACTB-213ENST00000493945 NUP98P52948 1817 aa18.91■□□□□ 0.62
ACTB-213ENST00000493945 LRP10Q7Z4F1 713 aa18.91■□□□□ 0.62
ACTB-213ENST00000493945 SLC16A10Q8TF71 515 aa18.91■□□□□ 0.62
ACTB-213ENST00000493945 DNAAF4Q8WXU2 420 aa18.91■□□□□ 0.62
ACTB-213ENST00000493945 ARHGEF1Q92888 912 aaKnown RBP18.91■□□□□ 0.62
ACTB-213ENST00000493945 CHMP4BQ9H444 224 aaKnown RBP18.91■□□□□ 0.62
ACTB-213ENST00000493945 TBC1D2BQ9UPU7 963 aa18.91■□□□□ 0.62
ACTB-213ENST00000493945 N4BP2Q86UW6 1770 aaPredicted RBP18.91■□□□□ 0.62
ACTB-213ENST00000493945 PI4KAP2A4QPH2 592 aa18.9■□□□□ 0.62
ACTB-213ENST00000493945 GIGYF2Q6Y7W6 1299 aaKnown RBP18.9■□□□□ 0.62
ACTB-213ENST00000493945 PI4KAP1Q8N8J0 262 aa18.9■□□□□ 0.62
ACTB-213ENST00000493945 ZBTB3Q9H5J0 574 aa18.9■□□□□ 0.62
ACTB-213ENST00000493945 PNPLA7Q6ZV29 1317 aa18.9■□□□□ 0.62
ACTB-213ENST00000493945 CCT4P50991 539 aaKnown RBP18.89■□□□□ 0.61
ACTB-213ENST00000493945 TTLL7Q6ZT98 887 aa18.89■□□□□ 0.61
ACTB-213ENST00000493945 MAP3K2Q9Y2U5 619 aa18.89■□□□□ 0.61
ACTB-213ENST00000493945 ATP10DQ9P241 1426 aa18.89■□□□□ 0.61
ACTB-213ENST00000493945 AFDNP55196 1824 aaKnown RBP18.88■□□□□ 0.61
ACTB-213ENST00000493945 CAMTA2O94983 1202 aa18.88■□□□□ 0.61
ACTB-213ENST00000493945 RRP1P56182 461 aaKnown RBP18.88■□□□□ 0.61
ACTB-213ENST00000493945 USPL1Q5W0Q7 1092 aa18.88■□□□□ 0.61
ACTB-213ENST00000493945 G2E3Q7L622 706 aa18.88■□□□□ 0.61
ACTB-213ENST00000493945 NLGN1Q8N2Q7 840 aa18.88■□□□□ 0.61
ACTB-213ENST00000493945 HDAC5Q9UQL6 1122 aa18.88■□□□□ 0.61
ACTB-213ENST00000493945 HSP90B1P14625 803 aaKnown RBP18.87■□□□□ 0.61
ACTB-213ENST00000493945 PDE3AQ14432 1141 aa18.87■□□□□ 0.61
ACTB-213ENST00000493945 PARP10Q53GL7 1025 aa18.87■□□□□ 0.61
ACTB-213ENST00000493945 SLC4A10Q6U841 1118 aa18.87■□□□□ 0.61
ACTB-213ENST00000493945 DZIP1LQ8IYY4 767 aaKnown RBP18.87■□□□□ 0.61
ACTB-213ENST00000493945 METTL22Q9BUU2 404 aaPredicted RBP18.87■□□□□ 0.61
ACTB-213ENST00000493945 ADCY9O60503 1353 aa18.86■□□□□ 0.61
ACTB-213ENST00000493945 NPHP1O15259 732 aa18.86■□□□□ 0.61
ACTB-213ENST00000493945 TRIM27P14373 513 aa18.86■□□□□ 0.61
ACTB-213ENST00000493945 COL23A1Q86Y22 540 aaPredicted RBP18.86■□□□□ 0.61
ACTB-213ENST00000493945 CARMIL3Q8ND23 1372 aa18.85■□□□□ 0.61
ACTB-213ENST00000493945 ABCC4O15439 1325 aa18.85■□□□□ 0.61
ACTB-213ENST00000493945 RNF123Q5XPI4 1314 aa18.85■□□□□ 0.61
ACTB-213ENST00000493945 ALDH1L1O75891 902 aa18.85■□□□□ 0.61
ACTB-213ENST00000493945 NEFLP07196 543 aa18.85■□□□□ 0.61
ACTB-213ENST00000493945 TCIRG1Q13488 830 aa18.85■□□□□ 0.61
ACTB-213ENST00000493945 LINS1Q8NG48 757 aa18.85■□□□□ 0.61
ACTB-213ENST00000493945 SETDB2Q96T68 719 aa18.85■□□□□ 0.61
ACTB-213ENST00000493945 MYD88Q99836 296 aa18.85■□□□□ 0.61
ACTB-213ENST00000493945 SRCIN1Q9C0H9 1055 aa18.85■□□□□ 0.61
ACTB-213ENST00000493945 IBTKQ9P2D0 1353 aaPredicted RBP18.84■□□□□ 0.61
ACTB-213ENST00000493945 R3HDM1Q15032 1099 aaKnown RBP18.84■□□□□ 0.61
ACTB-213ENST00000493945 PPP1R42Q7Z4L9 355 aa18.84■□□□□ 0.61
ACTB-213ENST00000493945 NYXQ9GZU5 481 aa18.84■□□□□ 0.61
ACTB-213ENST00000493945 NIP7Q9Y221 180 aaKnown RBP eCLIP18.84■□□□□ 0.61
ACTB-213ENST00000493945 CASZ1Q86V15 1759 aa18.83■□□□□ 0.61
ACTB-213ENST00000493945 GYS1P13807 737 aa18.83■□□□□ 0.6
ACTB-213ENST00000493945 CCDC191Q8NCU4 936 aa18.83■□□□□ 0.6
ACTB-213ENST00000493945 CWC25Q9NXE8 425 aaPredicted RBP18.83■□□□□ 0.6
ACTB-213ENST00000493945 SRP68Q9UHB9 627 aaKnown RBP18.83■□□□□ 0.6
ACTB-213ENST00000493945 F6X3S4 739 aa18.82■□□□□ 0.6
ACTB-213ENST00000493945 POLD1P28340 1107 aa18.82■□□□□ 0.6
ACTB-213ENST00000493945 TRIM28Q13263 835 aaKnown RBP18.82■□□□□ 0.6
ACTB-213ENST00000493945 CLUAP1Q96AJ1 413 aa18.82■□□□□ 0.6
ACTB-213ENST00000493945 MTFR1LQ9H019 292 aa18.82■□□□□ 0.6
ACTB-213ENST00000493945 SUPT16HQ9Y5B9 1047 aaKnown RBP18.82■□□□□ 0.6
ACTB-213ENST00000493945 COL24A1Q17RW2 1714 aa18.81■□□□□ 0.6
ACTB-213ENST00000493945 AMIGO3Q86WK7 504 aa18.81■□□□□ 0.6
ACTB-213ENST00000493945 ITPRIPQ8IWB1 547 aa18.81■□□□□ 0.6
ACTB-213ENST00000493945 DDX19BQ9UMR2 479 aa18.81■□□□□ 0.6
ACTB-213ENST00000493945 GTF2E1P29083 439 aaPredicted RBP18.8■□□□□ 0.6
ACTB-213ENST00000493945 HLFQ16534 295 aa18.8■□□□□ 0.6
ACTB-213ENST00000493945 INTS3Q68E01 1043 aaKnown RBP18.8■□□□□ 0.6
ACTB-213ENST00000493945 C9orf78Q9NZ63 289 aaPredicted RBP18.8■□□□□ 0.6
ACTB-213ENST00000493945 PARP3Q9Y6F1 533 aa18.8■□□□□ 0.6
ACTB-213ENST00000493945 NEURL1BA8MQ27 555 aa18.79■□□□□ 0.6
ACTB-213ENST00000493945 BEND3Q5T5X7 828 aa18.79■□□□□ 0.6
ACTB-213ENST00000493945 TPTE2Q6XPS3 522 aa18.79■□□□□ 0.6
ACTB-213ENST00000493945 BICDL1Q6ZP65 573 aa18.79■□□□□ 0.6
ACTB-213ENST00000493945 NBPF5PQ86XG9 351 aaPredicted RBP18.79■□□□□ 0.6
ACTB-213ENST00000493945 ZNF34Q8IZ26 560 aa18.79■□□□□ 0.6
ACTB-213ENST00000493945 ISCA1Q9BUE6 129 aa18.79■□□□□ 0.6
ACTB-213ENST00000493945 PLIN1O60240 522 aa18.78■□□□□ 0.6
ACTB-213ENST00000493945 GNAI3P08754 354 aa18.78■□□□□ 0.6
ACTB-213ENST00000493945 GPTP24298 496 aa18.78■□□□□ 0.6
ACTB-213ENST00000493945 ST5P78524 1137 aa18.78■□□□□ 0.6
ACTB-213ENST00000493945 FKBP8Q14318 412 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms