RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 MAP3K15Q6ZN16 1313 aa14.71□□□□□ -0.05
LSM2-214ENST00000493387 CLEC4GQ6UXB4 293 aa14.71□□□□□ -0.05
LSM2-214ENST00000493387 KSR2Q6VAB6 950 aa14.71□□□□□ -0.05
LSM2-214ENST00000493387 G2E3Q7L622 706 aa14.71□□□□□ -0.05
LSM2-214ENST00000493387 NOB1Q9ULX3 412 aaKnown RBP14.71□□□□□ -0.05
LSM2-214ENST00000493387 ZNF652Q9Y2D9 606 aa14.71□□□□□ -0.05
LSM2-214ENST00000493387 PNPLA7Q6ZV29 1317 aa14.7□□□□□ -0.06
LSM2-214ENST00000493387 MS4A1P11836 297 aa14.7□□□□□ -0.06
LSM2-214ENST00000493387 HSP90AB3PQ58FF7 597 aa14.7□□□□□ -0.06
LSM2-214ENST00000493387 ZKSCAN2Q63HK3 967 aa14.7□□□□□ -0.06
LSM2-214ENST00000493387 TTLL7Q6ZT98 887 aa14.7□□□□□ -0.06
LSM2-214ENST00000493387 RIC3Q7Z5B4 369 aa14.7□□□□□ -0.06
LSM2-214ENST00000493387 COL23A1Q86Y22 540 aaPredicted RBP14.7□□□□□ -0.06
LSM2-214ENST00000493387 TBC1D2BQ9UPU7 963 aa14.7□□□□□ -0.06
LSM2-214ENST00000493387 UBR3Q6ZT12 1888 aa14.69□□□□□ -0.06
LSM2-214ENST00000493387 USP42Q9H9J4 1324 aaKnown RBP14.69□□□□□ -0.06
LSM2-214ENST00000493387 CAMTA2O94983 1202 aa14.69□□□□□ -0.06
LSM2-214ENST00000493387 AMIGO3Q86WK7 504 aa14.69□□□□□ -0.06
LSM2-214ENST00000493387 SLC16A10Q8TF71 515 aa14.69□□□□□ -0.06
LSM2-214ENST00000493387 FRAT1Q92837 279 aaPredicted RBP14.69□□□□□ -0.06
LSM2-214ENST00000493387 PI4KAP2A4QPH2 592 aa14.68□□□□□ -0.06
LSM2-214ENST00000493387 NEXNQ0ZGT2 675 aa14.68□□□□□ -0.06
LSM2-214ENST00000493387 ATF7IPQ6VMQ6 1270 aa14.68□□□□□ -0.06
LSM2-214ENST00000493387 GIGYF2Q6Y7W6 1299 aaKnown RBP14.68□□□□□ -0.06
LSM2-214ENST00000493387 PI4KAP1Q8N8J0 262 aa14.68□□□□□ -0.06
LSM2-214ENST00000493387 DNAAF4Q8WXU2 420 aa14.68□□□□□ -0.06
LSM2-214ENST00000493387 ZBTB3Q9H5J0 574 aa14.68□□□□□ -0.06
LSM2-214ENST00000493387 USPL1Q5W0Q7 1092 aa14.67□□□□□ -0.06
LSM2-214ENST00000493387 SMIM5Q71RC9 77 aa14.67□□□□□ -0.06
LSM2-214ENST00000493387 NLGN1Q8N2Q7 840 aa14.67□□□□□ -0.06
LSM2-214ENST00000493387 METTL22Q9BUU2 404 aaPredicted RBP14.67□□□□□ -0.06
LSM2-214ENST00000493387 MAP3K2Q9Y2U5 619 aa14.67□□□□□ -0.06
LSM2-214ENST00000493387 QSER1Q2KHR3 1735 aa14.66□□□□□ -0.06
LSM2-214ENST00000493387 TCIRG1Q13488 830 aa14.66□□□□□ -0.06
LSM2-214ENST00000493387 R3HDM1Q15032 1099 aaKnown RBP14.66□□□□□ -0.06
LSM2-214ENST00000493387 SRP68Q9UHB9 627 aaKnown RBP14.66□□□□□ -0.06
LSM2-214ENST00000493387 ADCY9O60503 1353 aa14.65□□□□□ -0.06
LSM2-214ENST00000493387 GYS1P13807 737 aa14.65□□□□□ -0.06
LSM2-214ENST00000493387 TRIM27P14373 513 aa14.65□□□□□ -0.06
LSM2-214ENST00000493387 TRIM28Q13263 835 aaKnown RBP14.65□□□□□ -0.06
LSM2-214ENST00000493387 HLFQ16534 295 aa14.65□□□□□ -0.06
LSM2-214ENST00000493387 F6X3S4 739 aa14.64□□□□□ -0.07
LSM2-214ENST00000493387 CCT4P50991 539 aaKnown RBP14.64□□□□□ -0.07
LSM2-214ENST00000493387 RRP1P56182 461 aaKnown RBP14.64□□□□□ -0.07
LSM2-214ENST00000493387 PDE3AQ14432 1141 aa14.64□□□□□ -0.07
LSM2-214ENST00000493387 PARP10Q53GL7 1025 aa14.64□□□□□ -0.07
LSM2-214ENST00000493387 FTSJ3Q8IY81 847 aaKnown RBP14.64□□□□□ -0.07
LSM2-214ENST00000493387 DZIP1LQ8IYY4 767 aaKnown RBP14.64□□□□□ -0.07
LSM2-214ENST00000493387 LINS1Q8NG48 757 aa14.64□□□□□ -0.07
LSM2-214ENST00000493387 BCL2L12Q9HB09 334 aa14.64□□□□□ -0.07
LSM2-214ENST00000493387 ALDH1L1O75891 902 aa14.63□□□□□ -0.07
LSM2-214ENST00000493387 FKBP8Q14318 412 aa14.63□□□□□ -0.07
LSM2-214ENST00000493387 SLC4A10Q6U841 1118 aa14.63□□□□□ -0.07
LSM2-214ENST00000493387 ZNF34Q8IZ26 560 aa14.63□□□□□ -0.07
LSM2-214ENST00000493387 CCDC191Q8NCU4 936 aa14.63□□□□□ -0.07
LSM2-214ENST00000493387 SETDB2Q96T68 719 aa14.63□□□□□ -0.07
LSM2-214ENST00000493387 MYD88Q99836 296 aa14.63□□□□□ -0.07
LSM2-214ENST00000493387 ISCA1Q9BUE6 129 aa14.63□□□□□ -0.07
LSM2-214ENST00000493387 SRCIN1Q9C0H9 1055 aa14.63□□□□□ -0.07
LSM2-214ENST00000493387 NIP7Q9Y221 180 aaKnown RBP eCLIP14.63□□□□□ -0.07
LSM2-214ENST00000493387 SUPT16HQ9Y5B9 1047 aaKnown RBP14.63□□□□□ -0.07
LSM2-214ENST00000493387 ATP10DQ9P241 1426 aa14.63□□□□□ -0.07
LSM2-214ENST00000493387 ABCC4O15439 1325 aa14.63□□□□□ -0.07
LSM2-214ENST00000493387 RNF123Q5XPI4 1314 aa14.63□□□□□ -0.07
LSM2-214ENST00000493387 TUBGCP6Q96RT7 1819 aa14.62□□□□□ -0.07
LSM2-214ENST00000493387 BEND3Q5T5X7 828 aa14.62□□□□□ -0.07
LSM2-214ENST00000493387 PXDNLA1KZ92 1463 aa14.62□□□□□ -0.07
LSM2-214ENST00000493387 IBTKQ9P2D0 1353 aaPredicted RBP14.61□□□□□ -0.07
LSM2-214ENST00000493387 C4AP0C0L4 1744 aa14.61□□□□□ -0.07
LSM2-214ENST00000493387 TM4SF1P30408 202 aa14.61□□□□□ -0.07
LSM2-214ENST00000493387 TBC1D9BQ66K14 1250 aa14.61□□□□□ -0.07
LSM2-214ENST00000493387 INTS3Q68E01 1043 aaKnown RBP14.61□□□□□ -0.07
LSM2-214ENST00000493387 PPP1R42Q7Z4L9 355 aa14.61□□□□□ -0.07
LSM2-214ENST00000493387 MTFR1LQ9H019 292 aa14.61□□□□□ -0.07
LSM2-214ENST00000493387 CWC25Q9NXE8 425 aaPredicted RBP14.61□□□□□ -0.07
LSM2-214ENST00000493387 PSDA5PKW4 1024 aaPredicted RBP14.6□□□□□ -0.07
LSM2-214ENST00000493387 NEURL1BA8MQ27 555 aa14.6□□□□□ -0.07
LSM2-214ENST00000493387 ATP5J2-PTCD1G3V325 749 aa14.6□□□□□ -0.07
LSM2-214ENST00000493387 PLIN1O60240 522 aa14.6□□□□□ -0.07
LSM2-214ENST00000493387 GPTP24298 496 aa14.6□□□□□ -0.07
LSM2-214ENST00000493387 NFIXQ14938 502 aa14.6□□□□□ -0.07
LSM2-214ENST00000493387 NLRP10Q86W26 655 aa14.6□□□□□ -0.07
LSM2-214ENST00000493387 CLUAP1Q96AJ1 413 aa14.6□□□□□ -0.07
LSM2-214ENST00000493387 NYXQ9GZU5 481 aa14.6□□□□□ -0.07
LSM2-214ENST00000493387 CHMP4BQ9H444 224 aaKnown RBP14.6□□□□□ -0.07
LSM2-214ENST00000493387 SCN7AQ01118 1682 aa14.6□□□□□ -0.07
LSM2-214ENST00000493387 BCORQ6W2J9 1755 aa14.6□□□□□ -0.07
LSM2-214ENST00000493387 IGKV5-2P06315 115 aa14.59□□□□□ -0.07
LSM2-214ENST00000493387 HSP90B1P14625 803 aaKnown RBP14.59□□□□□ -0.07
LSM2-214ENST00000493387 BICDL1Q6ZP65 573 aa14.59□□□□□ -0.07
LSM2-214ENST00000493387 UTP14AQ9BVJ6 771 aaKnown RBP14.59□□□□□ -0.07
LSM2-214ENST00000493387 HDAC5Q9UQL6 1122 aa14.59□□□□□ -0.07
LSM2-214ENST00000493387 PARP3Q9Y6F1 533 aa14.59□□□□□ -0.07
LSM2-214ENST00000493387 NUP98P52948 1817 aa14.59□□□□□ -0.07
LSM2-214ENST00000493387 CARMIL3Q8ND23 1372 aa14.59□□□□□ -0.07
LSM2-214ENST00000493387 ARFGEF2Q9Y6D5 1785 aa14.58□□□□□ -0.08
LSM2-214ENST00000493387 POLD1P28340 1107 aa14.58□□□□□ -0.08
LSM2-214ENST00000493387 GCKRQ14397 625 aa14.58□□□□□ -0.08
LSM2-214ENST00000493387 TPTE2Q6XPS3 522 aa14.58□□□□□ -0.08
LSM2-214ENST00000493387 TMEM57Q8N5G2 664 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms