RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 SRGNP10124 158 aa28.83■■■□□ 2.21
PFDN4-205ENST00000493356 STYK1Q6J9G0 422 aa28.83■■■□□ 2.21
PFDN4-205ENST00000493356 ST5P78524 1137 aa28.82■■■□□ 2.2
PFDN4-205ENST00000493356 PRPF40BQ6NWY9 871 aaKnown RBP28.82■■■□□ 2.2
PFDN4-205ENST00000493356 DZIP3Q86Y13 1208 aaKnown RBP28.82■■■□□ 2.2
PFDN4-205ENST00000493356 TNS4Q8IZW8 715 aa28.82■■■□□ 2.2
PFDN4-205ENST00000493356 HSPA1AP0DMV8 641 aaKnown RBP28.81■■■□□ 2.2
PFDN4-205ENST00000493356 HSPA1BP0DMV9 641 aaKnown RBP28.81■■■□□ 2.2
PFDN4-205ENST00000493356 PRKAR2BP31323 418 aa28.81■■■□□ 2.2
PFDN4-205ENST00000493356 MASTLQ96GX5 879 aa28.8■■■□□ 2.2
PFDN4-205ENST00000493356 RSPH6AQ9H0K4 717 aa28.8■■■□□ 2.2
PFDN4-205ENST00000493356 USP16Q9Y5T5 823 aa28.8■■■□□ 2.2
PFDN4-205ENST00000493356 PIP4K2AP48426 406 aaPredicted RBP28.79■■■□□ 2.2
PFDN4-205ENST00000493356 DDNO94850 711 aaPredicted RBP28.78■■■□□ 2.2
PFDN4-205ENST00000493356 SOGA3Q5TF21 947 aa28.78■■■□□ 2.2
PFDN4-205ENST00000493356 CAPN15O75808 1086 aa28.77■■■□□ 2.2
PFDN4-205ENST00000493356 CHADLQ6NUI6 762 aa28.77■■■□□ 2.2
PFDN4-205ENST00000493356 PRAMEF22A3QJZ6 481 aa28.76■■■□□ 2.19
PFDN4-205ENST00000493356 POTEIP0CG38 1075 aa28.76■■■□□ 2.19
PFDN4-205ENST00000493356 POTEJP0CG39 1038 aa28.76■■■□□ 2.19
PFDN4-205ENST00000493356 CLEC4GQ6UXB4 293 aa28.75■■■□□ 2.19
PFDN4-205ENST00000493356 NBPF5PQ86XG9 351 aaPredicted RBP28.75■■■□□ 2.19
PFDN4-205ENST00000493356 C7orf43Q8WVR3 580 aa28.74■■■□□ 2.19
PFDN4-205ENST00000493356 CFAP53Q96M91 514 aa28.74■■■□□ 2.19
PFDN4-205ENST00000493356 CREBZFQ9NS37 354 aa28.74■■■□□ 2.19
PFDN4-205ENST00000493356 SNRPA1P09661 255 aaKnown RBP28.73■■■□□ 2.19
PFDN4-205ENST00000493356 ZNF652Q9Y2D9 606 aa28.73■■■□□ 2.19
PFDN4-205ENST00000493356 SCN4AP35499 1836 aa28.71■■■□□ 2.19
PFDN4-205ENST00000493356 CCDC93Q567U6 631 aa28.71■■■□□ 2.19
PFDN4-205ENST00000493356 MCM10Q7L590 875 aa28.71■■■□□ 2.19
PFDN4-205ENST00000493356 NPR1P16066 1061 aa28.7■■■□□ 2.18
PFDN4-205ENST00000493356 RTF1Q92541 710 aaKnown RBP28.7■■■□□ 2.18
PFDN4-205ENST00000493356 KLRG2A4D1S0 409 aaPredicted RBP28.69■■■□□ 2.18
PFDN4-205ENST00000493356 IQCA1LA6NCM1 817 aa28.69■■■□□ 2.18
PFDN4-205ENST00000493356 L3MBTL3Q96JM7 780 aaPredicted RBP28.69■■■□□ 2.18
PFDN4-205ENST00000493356 MKRN1Q9UHC7 482 aaKnown RBP28.69■■■□□ 2.18
PFDN4-205ENST00000493356 NUDCQ9Y266 331 aa28.69■■■□□ 2.18
PFDN4-205ENST00000493356 NBPF26B4DH59 902 aa28.68■■■□□ 2.18
PFDN4-205ENST00000493356 NBPF10Q6P3W6 841 aaKnown RBP28.68■■■□□ 2.18
PFDN4-205ENST00000493356 NBPF15Q8N660 670 aa28.68■■■□□ 2.18
PFDN4-205ENST00000493356 RGL2O15211 777 aa28.67■■■□□ 2.18
PFDN4-205ENST00000493356 U2AF1L5P0DN76 240 aaPredicted RBP28.67■■■□□ 2.18
PFDN4-205ENST00000493356 U2AF1Q01081 240 aaKnown RBP eCLIP28.67■■■□□ 2.18
PFDN4-205ENST00000493356 TPTE2Q6XPS3 522 aa28.67■■■□□ 2.18
PFDN4-205ENST00000493356 NIP7Q9Y221 180 aaKnown RBP eCLIP28.67■■■□□ 2.18
PFDN4-205ENST00000493356 FKBP4Q02790 459 aaKnown RBP eCLIP28.66■■■□□ 2.18
PFDN4-205ENST00000493356 LDHDQ86WU2 507 aa28.66■■■□□ 2.18
PFDN4-205ENST00000493356 TAF1DQ9H5J8 278 aaPredicted RBP28.66■■■□□ 2.18
PFDN4-205ENST00000493356 DCTN1Q14203 1278 aa28.65■■■□□ 2.18
PFDN4-205ENST00000493356 PASKQ96RG2 1323 aa28.65■■■□□ 2.18
PFDN4-205ENST00000493356 OLFM4Q6UX06 510 aa28.64■■■□□ 2.18
PFDN4-205ENST00000493356 ZNF277Q9NRM2 450 aaPredicted RBP28.64■■■□□ 2.18
PFDN4-205ENST00000493356 ZNF541Q9H0D2 1346 aa28.63■■■□□ 2.17
PFDN4-205ENST00000493356 CNTNAP1P78357 1384 aa28.62■■■□□ 2.17
PFDN4-205ENST00000493356 LAMB4A4D0S4 1761 aa28.62■■■□□ 2.17
PFDN4-205ENST00000493356 FAM177BA6PVY3 158 aa28.62■■■□□ 2.17
PFDN4-205ENST00000493356 HTATSF1O43719 755 aaKnown RBP28.62■■■□□ 2.17
PFDN4-205ENST00000493356 PPP2R1AP30153 589 aa28.62■■■□□ 2.17
PFDN4-205ENST00000493356 HLFQ16534 295 aa28.61■■■□□ 2.17
PFDN4-205ENST00000493356 RTKN2Q8IZC4 609 aa28.61■■■□□ 2.17
PFDN4-205ENST00000493356 ADAMTSL1Q8N6G6 1762 aa28.6■■■□□ 2.17
PFDN4-205ENST00000493356 TAF7Q15545 349 aaPredicted RBP28.59■■■□□ 2.17
PFDN4-205ENST00000493356 ITGBL1O95965 494 aaPredicted RBP28.58■■■□□ 2.17
PFDN4-205ENST00000493356 ALDH1B1P30837 517 aa28.58■■■□□ 2.17
PFDN4-205ENST00000493356 EAPPQ56P03 285 aaPredicted RBP28.58■■■□□ 2.17
PFDN4-205ENST00000493356 HACL1Q9UJ83 578 aa28.58■■■□□ 2.17
PFDN4-205ENST00000493356 GTF2E1P29083 439 aaPredicted RBP28.56■■■□□ 2.16
PFDN4-205ENST00000493356 IARSP41252 1262 aaKnown RBP28.56■■■□□ 2.16
PFDN4-205ENST00000493356 SYNE4Q8N205 404 aa28.56■■■□□ 2.16
PFDN4-205ENST00000493356 SNED1Q8TER0 1413 aa28.56■■■□□ 2.16
PFDN4-205ENST00000493356 MIS18AQ9NYP9 233 aa28.56■■■□□ 2.16
PFDN4-205ENST00000493356 NUP98P52948 1817 aa28.55■■■□□ 2.16
PFDN4-205ENST00000493356 TMEM88BA6NKF7 163 aa28.55■■■□□ 2.16
PFDN4-205ENST00000493356 FZD9O00144 591 aa28.55■■■□□ 2.16
PFDN4-205ENST00000493356 FOXN1O15353 648 aa28.55■■■□□ 2.16
PFDN4-205ENST00000493356 EPHX2P34913 555 aa28.55■■■□□ 2.16
PFDN4-205ENST00000493356 KDM3BQ7LBC6 1761 aa28.55■■■□□ 2.16
PFDN4-205ENST00000493356 ABCC12Q96J65 1359 aa28.54■■■□□ 2.16
PFDN4-205ENST00000493356 DLG5Q8TDM6 1919 aa28.54■■■□□ 2.16
PFDN4-205ENST00000493356 CLEC11AQ9Y240 323 aa28.54■■■□□ 2.16
PFDN4-205ENST00000493356 RNF123Q5XPI4 1314 aa28.53■■■□□ 2.16
PFDN4-205ENST00000493356 CRY2Q49AN0 593 aa28.53■■■□□ 2.16
PFDN4-205ENST00000493356 VEGFBP49765 207 aa28.52■■■□□ 2.16
PFDN4-205ENST00000493356 PSMD1Q99460 953 aa28.52■■■□□ 2.16
PFDN4-205ENST00000493356 NYXQ9GZU5 481 aa28.52■■■□□ 2.16
PFDN4-205ENST00000493356 ERVV-1B6SEH8 477 aa28.51■■■□□ 2.15
PFDN4-205ENST00000493356 PNMA8AQ86V59 439 aaPredicted RBP28.51■■■□□ 2.15
PFDN4-205ENST00000493356 NUTM1Q86Y26 1132 aa28.51■■■□□ 2.15
PFDN4-205ENST00000493356 GPC2Q8N158 579 aa28.51■■■□□ 2.15
PFDN4-205ENST00000493356 NGEFQ8N5V2 710 aa28.51■■■□□ 2.15
PFDN4-205ENST00000493356 MAP3K15Q6ZN16 1313 aa28.49■■■□□ 2.15
PFDN4-205ENST00000493356 COL4A5P29400 1685 aa28.49■■■□□ 2.15
PFDN4-205ENST00000493356 MAP1SQ66K74 1059 aaPredicted RBP28.49■■■□□ 2.15
PFDN4-205ENST00000493356 PRDM10Q9NQV6 1147 aa28.49■■■□□ 2.15
PFDN4-205ENST00000493356 CNTROBQ8N137 903 aa28.48■■■□□ 2.15
PFDN4-205ENST00000493356 PNISRQ8TF01 805 aaKnown RBP28.48■■■□□ 2.15
PFDN4-205ENST00000493356 JDP2Q8WYK2 163 aa28.48■■■□□ 2.15
PFDN4-205ENST00000493356 RIC1Q4ADV7 1423 aa28.47■■■□□ 2.15
PFDN4-205ENST00000493356 CC2D2BQ6DHV5 1058 aa28.47■■■□□ 2.15
PFDN4-205ENST00000493356 TTLL7Q6ZT98 887 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms