RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 AIMP1Q12904 312 aaKnown RBP21.7■■□□□ 1.06
RER1-208ENST00000493207 XAGE3Q8WTP9 111 aa21.7■■□□□ 1.06
RER1-208ENST00000493207 PPP1R1BQ9UD71 204 aaPredicted RBP21.7■■□□□ 1.06
RER1-208ENST00000493207 NUP98P52948 1817 aa21.7■■□□□ 1.06
RER1-208ENST00000493207 MMP10P09238 476 aa21.69■■□□□ 1.06
RER1-208ENST00000493207 COPS6Q7L5N1 327 aa21.69■■□□□ 1.06
RER1-208ENST00000493207 HYPKQ9NX55 129 aa21.69■■□□□ 1.06
RER1-208ENST00000493207 STK31Q9BXU1 1019 aa21.68■■□□□ 1.06
RER1-208ENST00000493207 ZBTB3Q9H5J0 574 aa21.68■■□□□ 1.06
RER1-208ENST00000493207 MAP3K15Q6ZN16 1313 aa21.68■■□□□ 1.06
RER1-208ENST00000493207 HLFQ16534 295 aa21.67■■□□□ 1.06
RER1-208ENST00000493207 TBC1D9BQ66K14 1250 aa21.67■■□□□ 1.06
RER1-208ENST00000493207 BICDL1Q6ZP65 573 aa21.67■■□□□ 1.06
RER1-208ENST00000493207 ZNF652Q9Y2D9 606 aa21.67■■□□□ 1.06
RER1-208ENST00000493207 CACNA1FO60840 1977 aa21.67■■□□□ 1.06
RER1-208ENST00000493207 ERVV-1B6SEH8 477 aa21.66■■□□□ 1.06
RER1-208ENST00000493207 NFIXQ14938 502 aa21.66■■□□□ 1.06
RER1-208ENST00000493207 PHAXQ9H814 394 aaKnown RBP21.66■■□□□ 1.06
RER1-208ENST00000493207 PARP3Q9Y6F1 533 aa21.66■■□□□ 1.06
RER1-208ENST00000493207 AFDNP55196 1824 aaKnown RBP21.65■■□□□ 1.06
RER1-208ENST00000493207 TM4SF1P30408 202 aa21.65■■□□□ 1.06
RER1-208ENST00000493207 DDR1Q08345 913 aa21.65■■□□□ 1.06
RER1-208ENST00000493207 CLEC4GQ6UXB4 293 aa21.65■■□□□ 1.06
RER1-208ENST00000493207 ARFGEF2Q9Y6D5 1785 aa21.65■■□□□ 1.06
RER1-208ENST00000493207 SLC4A2P04920 1241 aa21.64■■□□□ 1.05
RER1-208ENST00000493207 ANKRD36CQ5JPF3 1778 aa21.64■■□□□ 1.05
RER1-208ENST00000493207 POLRMTO00411 1230 aaKnown RBP21.63■■□□□ 1.05
RER1-208ENST00000493207 RGL2O15211 777 aa21.63■■□□□ 1.05
RER1-208ENST00000493207 KLHL34Q8N239 644 aa21.62■■□□□ 1.05
RER1-208ENST00000493207 SETDB2Q96T68 719 aa21.62■■□□□ 1.05
RER1-208ENST00000493207 NRXN2Q9P2S2 1712 aa21.62■■□□□ 1.05
RER1-208ENST00000493207 CARMIL3Q8ND23 1372 aa21.61■■□□□ 1.05
RER1-208ENST00000493207 GIGYF2Q6Y7W6 1299 aaKnown RBP21.61■■□□□ 1.05
RER1-208ENST00000493207 ANKRD13DQ6ZTN6 518 aa21.61■■□□□ 1.05
RER1-208ENST00000493207 G2E3Q7L622 706 aa21.61■■□□□ 1.05
RER1-208ENST00000493207 PLBD2Q8NHP8 589 aa21.61■■□□□ 1.05
RER1-208ENST00000493207 YTHDC1Q96MU7 727 aaKnown RBP21.61■■□□□ 1.05
RER1-208ENST00000493207 FHDC1Q9C0D6 1143 aaPredicted RBP21.6■■□□□ 1.05
RER1-208ENST00000493207 NIP7Q9Y221 180 aaKnown RBP eCLIP21.6■■□□□ 1.05
RER1-208ENST00000493207 ATP10DQ9P241 1426 aa21.6■■□□□ 1.05
RER1-208ENST00000493207 SERPINB2P05120 415 aa21.59■■□□□ 1.05
RER1-208ENST00000493207 KIF13BQ9NQT8 1826 aa21.59■■□□□ 1.05
RER1-208ENST00000493207 DDX58O95786 925 aaKnown RBP21.58■■□□□ 1.05
RER1-208ENST00000493207 CT47B1P0C2W7 299 aaPredicted RBP21.58■■□□□ 1.05
RER1-208ENST00000493207 GPTP24298 496 aa21.58■■□□□ 1.05
RER1-208ENST00000493207 FLIIQ13045 1269 aa21.58■■□□□ 1.05
RER1-208ENST00000493207 RIC3Q7Z5B4 369 aa21.58■■□□□ 1.05
RER1-208ENST00000493207 ZNF34Q8IZ26 560 aa21.57■■□□□ 1.04
RER1-208ENST00000493207 ZNF428Q96B54 188 aa21.57■■□□□ 1.04
RER1-208ENST00000493207 C10orf71Q711Q0 1435 aa21.56■■□□□ 1.04
RER1-208ENST00000493207 FAM177BA6PVY3 158 aa21.56■■□□□ 1.04
RER1-208ENST00000493207 SSH1Q8WYL5 1049 aa21.56■■□□□ 1.04
RER1-208ENST00000493207 BCL2L13Q9BXK5 485 aa21.56■■□□□ 1.04
RER1-208ENST00000493207 UBN2Q6ZU65 1347 aa21.55■■□□□ 1.04
RER1-208ENST00000493207 FKBP5Q13451 457 aaPredicted RBP21.55■■□□□ 1.04
RER1-208ENST00000493207 TCIRG1Q13488 830 aa21.55■■□□□ 1.04
RER1-208ENST00000493207 HSP90AB3PQ58FF7 597 aa21.55■■□□□ 1.04
RER1-208ENST00000493207 NBPF5PQ86XG9 351 aaPredicted RBP21.55■■□□□ 1.04
RER1-208ENST00000493207 ADCY9O60503 1353 aa21.55■■□□□ 1.04
RER1-208ENST00000493207 PI4KAP2A4QPH2 592 aa21.54■■□□□ 1.04
RER1-208ENST00000493207 NPHP1O15259 732 aa21.54■■□□□ 1.04
RER1-208ENST00000493207 ALDH1L2Q3SY69 923 aa21.54■■□□□ 1.04
RER1-208ENST00000493207 KSR2Q6VAB6 950 aa21.54■■□□□ 1.04
RER1-208ENST00000493207 MRPL50Q8N5N7 158 aaKnown RBP21.54■■□□□ 1.04
RER1-208ENST00000493207 PI4KAP1Q8N8J0 262 aa21.54■■□□□ 1.04
RER1-208ENST00000493207 CNBD1Q8NA66 436 aa21.54■■□□□ 1.04
RER1-208ENST00000493207 SYT17Q9BSW7 474 aa21.54■■□□□ 1.04
RER1-208ENST00000493207 MAP3K2Q9Y2U5 619 aa21.54■■□□□ 1.04
RER1-208ENST00000493207 CD2APQ9Y5K6 639 aa21.54■■□□□ 1.04
RER1-208ENST00000493207 N4BP2Q86UW6 1770 aaPredicted RBP21.53■■□□□ 1.04
RER1-208ENST00000493207 PRR5LQ6MZQ0 368 aa21.53■■□□□ 1.04
RER1-208ENST00000493207 CCDC24Q8N4L8 307 aa21.53■■□□□ 1.04
RER1-208ENST00000493207 SMC4Q9NTJ3 1288 aa21.53■■□□□ 1.04
RER1-208ENST00000493207 KIAA1551Q9HCM1 1747 aa21.52■■□□□ 1.04
RER1-208ENST00000493207 ANKRD31Q8N7Z5 1873 aa21.52■■□□□ 1.04
RER1-208ENST00000493207 ATP5J2-PTCD1G3V325 749 aa21.52■■□□□ 1.04
RER1-208ENST00000493207 SUSD4Q5VX71 490 aa21.52■■□□□ 1.04
RER1-208ENST00000493207 NLGN2Q8NFZ4 835 aa21.52■■□□□ 1.04
RER1-208ENST00000493207 MYD88Q99836 296 aa21.52■■□□□ 1.04
RER1-208ENST00000493207 RARSP54136 660 aaKnown RBP21.51■■□□□ 1.03
RER1-208ENST00000493207 ST5P78524 1137 aa21.51■■□□□ 1.03
RER1-208ENST00000493207 PARP10Q53GL7 1025 aa21.51■■□□□ 1.03
RER1-208ENST00000493207 TPTE2Q6XPS3 522 aa21.51■■□□□ 1.03
RER1-208ENST00000493207 METTL22Q9BUU2 404 aaPredicted RBP21.51■■□□□ 1.03
RER1-208ENST00000493207 PPP1R42Q7Z4L9 355 aa21.5■■□□□ 1.03
RER1-208ENST00000493207 NLRP10Q86W26 655 aa21.5■■□□□ 1.03
RER1-208ENST00000493207 ISCA1Q9BUE6 129 aa21.5■■□□□ 1.03
RER1-208ENST00000493207 NYXQ9GZU5 481 aa21.5■■□□□ 1.03
RER1-208ENST00000493207 IBTKQ9P2D0 1353 aaPredicted RBP21.49■■□□□ 1.03
RER1-208ENST00000493207 GTF2E1P29083 439 aaPredicted RBP21.49■■□□□ 1.03
RER1-208ENST00000493207 NUTM1Q86Y26 1132 aa21.49■■□□□ 1.03
RER1-208ENST00000493207 PXDNLA1KZ92 1463 aa21.48■■□□□ 1.03
RER1-208ENST00000493207 F6X3S4 739 aa21.48■■□□□ 1.03
RER1-208ENST00000493207 NTSR2O95665 410 aa21.48■■□□□ 1.03
RER1-208ENST00000493207 DNAAF4Q8WXU2 420 aa21.48■■□□□ 1.03
RER1-208ENST00000493207 UTP14AQ9BVJ6 771 aaKnown RBP21.48■■□□□ 1.03
RER1-208ENST00000493207 NEXNQ0ZGT2 675 aa21.47■■□□□ 1.03
RER1-208ENST00000493207 ERFEQ4G0M1 354 aa21.47■■□□□ 1.03
RER1-208ENST00000493207 TNRC6CQ9HCJ0 1690 aaKnown RBP21.47■■□□□ 1.03
RER1-208ENST00000493207 TGFB2P61812 414 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms