RNA–Protein interactions for RNA: ENST00000492959.1

GTF2E1-204, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 4

Gene GTF2E1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-204ENST00000492959 DZIP3Q86Y13 1208 aaKnown RBP15.18■□□□□ 0.02
GTF2E1-204ENST00000492959 CNKSR1Q969H4 720 aa15.18■□□□□ 0.02
GTF2E1-204ENST00000492959 PHACTR3Q96KR7 559 aa15.18■□□□□ 0.02
GTF2E1-204ENST00000492959 COL11A2P13942 1736 aaPredicted RBP15.17■□□□□ 0.02
GTF2E1-204ENST00000492959 ERFEQ4G0M1 354 aa15.17■□□□□ 0.02
GTF2E1-204ENST00000492959 STYK1Q6J9G0 422 aa15.17■□□□□ 0.02
GTF2E1-204ENST00000492959 TAOK3Q9H2K8 898 aa15.17■□□□□ 0.02
GTF2E1-204ENST00000492959 ZNF652Q9Y2D9 606 aa15.17■□□□□ 0.02
GTF2E1-204ENST00000492959 LTBP3Q9NS15 1303 aa15.17■□□□□ 0.02
GTF2E1-204ENST00000492959 FER1L6Q2WGJ9 1857 aa15.16■□□□□ 0.02
GTF2E1-204ENST00000492959 BCORQ6W2J9 1755 aa15.16■□□□□ 0.02
GTF2E1-204ENST00000492959 DICER1Q9UPY3 1922 aaKnown RBP15.16■□□□□ 0.02
GTF2E1-204ENST00000492959 SNRPA1P09661 255 aaKnown RBP15.16■□□□□ 0.02
GTF2E1-204ENST00000492959 U2AF1L5P0DN76 240 aaPredicted RBP15.16■□□□□ 0.02
GTF2E1-204ENST00000492959 U2AF1Q01081 240 aaKnown RBP eCLIP15.16■□□□□ 0.02
GTF2E1-204ENST00000492959 CLEC4GQ6UXB4 293 aa15.16■□□□□ 0.02
GTF2E1-204ENST00000492959 CCDC24Q8N4L8 307 aa15.16■□□□□ 0.02
GTF2E1-204ENST00000492959 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
GTF2E1-204ENST00000492959 KCNQ3O43525 872 aa15.15■□□□□ 0.02
GTF2E1-204ENST00000492959 SRGNP10124 158 aa15.15■□□□□ 0.02
GTF2E1-204ENST00000492959 MASTLQ96GX5 879 aa15.15■□□□□ 0.02
GTF2E1-204ENST00000492959 USP16Q9Y5T5 823 aa15.15■□□□□ 0.02
GTF2E1-204ENST00000492959 RGL2O15211 777 aa15.14■□□□□ 0.01
GTF2E1-204ENST00000492959 PRPF40BQ6NWY9 871 aaKnown RBP15.14■□□□□ 0.01
GTF2E1-204ENST00000492959 NBPF5PQ86XG9 351 aaPredicted RBP15.14■□□□□ 0.01
GTF2E1-204ENST00000492959 ARFGEF2Q9Y6D5 1785 aa15.13■□□□□ 0.01
GTF2E1-204ENST00000492959 HTATSF1O43719 755 aaKnown RBP15.13■□□□□ 0.01
GTF2E1-204ENST00000492959 MCM10Q7L590 875 aa15.13■□□□□ 0.01
GTF2E1-204ENST00000492959 SLX4Q8IY92 1834 aa15.13■□□□□ 0.01
GTF2E1-204ENST00000492959 CACNA1SQ13698 1873 aa15.12■□□□□ 0.01
GTF2E1-204ENST00000492959 POTECB2RU33 542 aa15.12■□□□□ 0.01
GTF2E1-204ENST00000492959 PPP2R1AP30153 589 aa15.12■□□□□ 0.01
GTF2E1-204ENST00000492959 FOXD4L1Q9NU39 408 aa15.12■□□□□ 0.01
GTF2E1-204ENST00000492959 NEFMP07197 916 aa15.11■□□□□ 0.01
GTF2E1-204ENST00000492959 NPR1P16066 1061 aa15.11■□□□□ 0.01
GTF2E1-204ENST00000492959 PIP4K2AP48426 406 aaPredicted RBP15.11■□□□□ 0.01
GTF2E1-204ENST00000492959 TPTE2Q6XPS3 522 aa15.11■□□□□ 0.01
GTF2E1-204ENST00000492959 PCNTO95613 3336 aa15.1■□□□□ 0.01
GTF2E1-204ENST00000492959 PRAMEF22A3QJZ6 481 aa15.1■□□□□ 0.01
GTF2E1-204ENST00000492959 TAF7Q15545 349 aaPredicted RBP15.1■□□□□ 0.01
GTF2E1-204ENST00000492959 CCDC93Q567U6 631 aa15.1■□□□□ 0.01
GTF2E1-204ENST00000492959 NIP7Q9Y221 180 aaKnown RBP eCLIP15.1■□□□□ 0.01
GTF2E1-204ENST00000492959 IQCA1LA6NCM1 817 aa15.09■□□□□ 0.01
GTF2E1-204ENST00000492959 COL13A1Q5TAT6 717 aaPredicted RBP15.09■□□□□ 0.01
GTF2E1-204ENST00000492959 CHADLQ6NUI6 762 aa15.09■□□□□ 0.01
GTF2E1-204ENST00000492959 KLRG2A4D1S0 409 aaPredicted RBP15.08■□□□□ 0
GTF2E1-204ENST00000492959 NBPF26B4DH59 902 aa15.08■□□□□ 0
GTF2E1-204ENST00000492959 DDNO94850 711 aaPredicted RBP15.08■□□□□ 0
GTF2E1-204ENST00000492959 DCTN1Q14203 1278 aa15.08■□□□□ 0
GTF2E1-204ENST00000492959 NBPF10Q6P3W6 841 aaKnown RBP15.08■□□□□ 0
GTF2E1-204ENST00000492959 NBPF15Q8N660 670 aa15.08■□□□□ 0
GTF2E1-204ENST00000492959 C7orf43Q8WVR3 580 aa15.08■□□□□ 0
GTF2E1-204ENST00000492959 GTF2E1P29083 439 aaPredicted RBP15.07■□□□□ 0
GTF2E1-204ENST00000492959 RTKN2Q8IZC4 609 aa15.07■□□□□ 0
GTF2E1-204ENST00000492959 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
GTF2E1-204ENST00000492959 CREBZFQ9NS37 354 aa15.07■□□□□ 0
GTF2E1-204ENST00000492959 LAMB4A4D0S4 1761 aa15.06■□□□□ 0
GTF2E1-204ENST00000492959 ALDH1B1P30837 517 aa15.06■□□□□ 0
GTF2E1-204ENST00000492959 FKBP4Q02790 459 aaKnown RBP eCLIP15.06■□□□□ 0
GTF2E1-204ENST00000492959 L3MBTL3Q96JM7 780 aaPredicted RBP15.06■□□□□ 0
GTF2E1-204ENST00000492959 SCN4AP35499 1836 aa15.06■□□□□ 0
GTF2E1-204ENST00000492959 HSPA1AP0DMV8 641 aaKnown RBP15.05■□□□□ -0
GTF2E1-204ENST00000492959 HSPA1BP0DMV9 641 aaKnown RBP15.05■□□□□ -0
GTF2E1-204ENST00000492959 LDHDQ86WU2 507 aa15.05■□□□□ -0
GTF2E1-204ENST00000492959 TNS4Q8IZW8 715 aa15.05■□□□□ -0
GTF2E1-204ENST00000492959 NYXQ9GZU5 481 aa15.05■□□□□ -0
GTF2E1-204ENST00000492959 FAM177BA6PVY3 158 aa15.04■□□□□ -0
GTF2E1-204ENST00000492959 ERVV-1B6SEH8 477 aa15.04■□□□□ -0
GTF2E1-204ENST00000492959 HLFQ16534 295 aa15.04■□□□□ -0
GTF2E1-204ENST00000492959 ZBTB22O15209 634 aa15.03■□□□□ -0
GTF2E1-204ENST00000492959 KIF6Q6ZMV9 814 aa15.03■□□□□ -0
GTF2E1-204ENST00000492959 PNNQ9H307 717 aaKnown RBP15.03■□□□□ -0
GTF2E1-204ENST00000492959 TAF1DQ9H5J8 278 aaPredicted RBP15.03■□□□□ -0
GTF2E1-204ENST00000492959 ZNF277Q9NRM2 450 aaPredicted RBP15.03■□□□□ -0
GTF2E1-204ENST00000492959 MIS18AQ9NYP9 233 aa15.03■□□□□ -0
GTF2E1-204ENST00000492959 DLG5Q8TDM6 1919 aa15.02■□□□□ -0
GTF2E1-204ENST00000492959 POTEIP0CG38 1075 aa15.02■□□□□ -0
GTF2E1-204ENST00000492959 POTEJP0CG39 1038 aa15.02■□□□□ -0
GTF2E1-204ENST00000492959 CC2D2BQ6DHV5 1058 aa15.02■□□□□ -0
GTF2E1-204ENST00000492959 HACL1Q9UJ83 578 aa15.02■□□□□ -0
GTF2E1-204ENST00000492959 KDM3BQ7LBC6 1761 aa15.02□□□□□ -0.01
GTF2E1-204ENST00000492959 MAP3K15Q6ZN16 1313 aa15.01□□□□□ -0.01
GTF2E1-204ENST00000492959 IARSP41252 1262 aaKnown RBP15.01□□□□□ -0.01
GTF2E1-204ENST00000492959 CRY2Q49AN0 593 aa15.01□□□□□ -0.01
GTF2E1-204ENST00000492959 NGEFQ8N5V2 710 aa15.01□□□□□ -0.01
GTF2E1-204ENST00000492959 MKRN1Q9UHC7 482 aaKnown RBP15.01□□□□□ -0.01
GTF2E1-204ENST00000492959 IBTKQ9P2D0 1353 aaPredicted RBP15□□□□□ -0.01
GTF2E1-204ENST00000492959 ZNF541Q9H0D2 1346 aa15□□□□□ -0.01
GTF2E1-204ENST00000492959 MAPK8IP3Q9UPT6 1336 aa15□□□□□ -0.01
GTF2E1-204ENST00000492959 EIF4A1P60842 406 aaKnown RBP15□□□□□ -0.01
GTF2E1-204ENST00000492959 NFE2L2Q16236 605 aa15□□□□□ -0.01
GTF2E1-204ENST00000492959 GRIPAP1Q4V328 841 aa15□□□□□ -0.01
GTF2E1-204ENST00000492959 EAPPQ56P03 285 aaPredicted RBP15□□□□□ -0.01
GTF2E1-204ENST00000492959 PNMA8AQ86V59 439 aaPredicted RBP15□□□□□ -0.01
GTF2E1-204ENST00000492959 SYNE4Q8N205 404 aa15□□□□□ -0.01
GTF2E1-204ENST00000492959 JDP2Q8WYK2 163 aa15□□□□□ -0.01
GTF2E1-204ENST00000492959 RPGRQ92834 1020 aaKnown RBP15□□□□□ -0.01
GTF2E1-204ENST00000492959 PSMD1Q99460 953 aa15□□□□□ -0.01
GTF2E1-204ENST00000492959 RRP7AQ9Y3A4 280 aaKnown RBP15□□□□□ -0.01
GTF2E1-204ENST00000492959 NUP98P52948 1817 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms