RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 MASTLQ96GX5 879 aa16.45■□□□□ 0.22
GPNMB-214ENST00000492858 PANK3Q9H999 370 aa16.45■□□□□ 0.22
GPNMB-214ENST00000492858 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
GPNMB-214ENST00000492858 SCN4AP35499 1836 aa16.45■□□□□ 0.22
GPNMB-214ENST00000492858 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
GPNMB-214ENST00000492858 MAP1SQ66K74 1059 aaPredicted RBP16.44■□□□□ 0.22
GPNMB-214ENST00000492858 TTC5Q8N0Z6 440 aa16.44■□□□□ 0.22
GPNMB-214ENST00000492858 CNTROBQ8N137 903 aa16.44■□□□□ 0.22
GPNMB-214ENST00000492858 SETDB2Q96T68 719 aa16.44■□□□□ 0.22
GPNMB-214ENST00000492858 SCN7AQ01118 1682 aa16.43■□□□□ 0.22
GPNMB-214ENST00000492858 CCDC93Q567U6 631 aa16.43■□□□□ 0.22
GPNMB-214ENST00000492858 ZNF277Q9NRM2 450 aaPredicted RBP16.43■□□□□ 0.22
GPNMB-214ENST00000492858 HMOX1P09601 288 aa16.42■□□□□ 0.22
GPNMB-214ENST00000492858 RGS19P49795 217 aa16.42■□□□□ 0.22
GPNMB-214ENST00000492858 FKBP4Q02790 459 aaKnown RBP eCLIP16.42■□□□□ 0.22
GPNMB-214ENST00000492858 PNMA8AQ86V59 439 aaPredicted RBP16.42■□□□□ 0.22
GPNMB-214ENST00000492858 C7orf43Q8WVR3 580 aa16.42■□□□□ 0.22
GPNMB-214ENST00000492858 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
GPNMB-214ENST00000492858 MTHFSDQ2M296 383 aaKnown RBP16.41■□□□□ 0.22
GPNMB-214ENST00000492858 ZNF496Q96IT1 587 aaPredicted RBP16.41■□□□□ 0.22
GPNMB-214ENST00000492858 BEGAINQ9BUH8 593 aa16.41■□□□□ 0.22
GPNMB-214ENST00000492858 ADAMTSL1Q8N6G6 1762 aa16.41■□□□□ 0.22
GPNMB-214ENST00000492858 CAMTA2O94983 1202 aa16.4■□□□□ 0.22
GPNMB-214ENST00000492858 IL6STP40189 918 aaPredicted RBP16.4■□□□□ 0.22
GPNMB-214ENST00000492858 PAXIP1Q6ZW49 1069 aaPredicted RBP16.4■□□□□ 0.22
GPNMB-214ENST00000492858 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
GPNMB-214ENST00000492858 CACNA1SQ13698 1873 aa16.39■□□□□ 0.22
GPNMB-214ENST00000492858 HEG1Q9ULI3 1381 aa16.39■□□□□ 0.21
GPNMB-214ENST00000492858 UBR2Q8IWV8 1755 aa16.39■□□□□ 0.21
GPNMB-214ENST00000492858 GRM1Q13255 1194 aa16.39■□□□□ 0.21
GPNMB-214ENST00000492858 OLFM4Q6UX06 510 aa16.39■□□□□ 0.21
GPNMB-214ENST00000492858 CAPNS2Q96L46 248 aa16.39■□□□□ 0.21
GPNMB-214ENST00000492858 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.21
GPNMB-214ENST00000492858 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
GPNMB-214ENST00000492858 A1BGP04217 495 aa16.38■□□□□ 0.21
GPNMB-214ENST00000492858 NPR1P16066 1061 aa16.38■□□□□ 0.21
GPNMB-214ENST00000492858 NBPF5PQ86XG9 351 aaPredicted RBP16.38■□□□□ 0.21
GPNMB-214ENST00000492858 ARFGEF2Q9Y6D5 1785 aa16.38■□□□□ 0.21
GPNMB-214ENST00000492858 FZD9O00144 591 aa16.37■□□□□ 0.21
GPNMB-214ENST00000492858 ZNF790Q6PG37 636 aa16.37■□□□□ 0.21
GPNMB-214ENST00000492858 RTKN2Q8IZC4 609 aa16.37■□□□□ 0.21
GPNMB-214ENST00000492858 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
GPNMB-214ENST00000492858 GPR101Q96P66 508 aaPredicted RBP16.37■□□□□ 0.21
GPNMB-214ENST00000492858 TSKSQ9UJT2 592 aa16.37■□□□□ 0.21
GPNMB-214ENST00000492858 TNRC18O15417 2968 aaPredicted RBP16.37■□□□□ 0.21
GPNMB-214ENST00000492858 IARSP41252 1262 aaKnown RBP16.36■□□□□ 0.21
GPNMB-214ENST00000492858 ECE1P42892 770 aa16.36■□□□□ 0.21
GPNMB-214ENST00000492858 CYP4F22Q6NT55 531 aa16.36■□□□□ 0.21
GPNMB-214ENST00000492858 DZIP3Q86Y13 1208 aaKnown RBP16.36■□□□□ 0.21
GPNMB-214ENST00000492858 GPC2Q8N158 579 aa16.36■□□□□ 0.21
GPNMB-214ENST00000492858 FMR1Q06787 632 aaKnown RBP eCLIP16.35■□□□□ 0.21
GPNMB-214ENST00000492858 TEFQ10587 303 aa16.35■□□□□ 0.21
GPNMB-214ENST00000492858 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
GPNMB-214ENST00000492858 THSD7BQ9C0I4 1608 aa16.34■□□□□ 0.21
GPNMB-214ENST00000492858 FMNL2Q96PY5 1086 aa16.34■□□□□ 0.21
GPNMB-214ENST00000492858 GJA3Q9Y6H8 435 aa16.34■□□□□ 0.21
GPNMB-214ENST00000492858 KLRG2A4D1S0 409 aaPredicted RBP16.33■□□□□ 0.2
GPNMB-214ENST00000492858 LMOD1P29536 600 aaPredicted RBP16.33■□□□□ 0.2
GPNMB-214ENST00000492858 PIP4K2AP48426 406 aaPredicted RBP16.33■□□□□ 0.2
GPNMB-214ENST00000492858 JDP2Q8WYK2 163 aa16.33■□□□□ 0.2
GPNMB-214ENST00000492858 KNSTRNQ9Y448 316 aa16.33■□□□□ 0.2
GPNMB-214ENST00000492858 AOC2O75106 756 aa16.32■□□□□ 0.2
GPNMB-214ENST00000492858 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
GPNMB-214ENST00000492858 MCOLN1Q9GZU1 580 aa16.32■□□□□ 0.2
GPNMB-214ENST00000492858 ZNF652Q9Y2D9 606 aa16.32■□□□□ 0.2
GPNMB-214ENST00000492858 TRAF5O00463 557 aa16.31■□□□□ 0.2
GPNMB-214ENST00000492858 EIF6P56537 245 aaKnown RBP16.31■□□□□ 0.2
GPNMB-214ENST00000492858 CST9Q5W186 159 aa16.31■□□□□ 0.2
GPNMB-214ENST00000492858 CLEC4GQ6UXB4 293 aa16.31■□□□□ 0.2
GPNMB-214ENST00000492858 BCORQ6W2J9 1755 aa16.31■□□□□ 0.2
GPNMB-214ENST00000492858 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
GPNMB-214ENST00000492858 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
GPNMB-214ENST00000492858 MAP2K2P36507 400 aa16.3■□□□□ 0.2
GPNMB-214ENST00000492858 EPS15P42566 896 aa16.3■□□□□ 0.2
GPNMB-214ENST00000492858 TPTE2Q6XPS3 522 aa16.3■□□□□ 0.2
GPNMB-214ENST00000492858 TLL2Q9Y6L7 1015 aa16.3■□□□□ 0.2
GPNMB-214ENST00000492858 GNAT3A8MTJ3 354 aa16.29■□□□□ 0.2
GPNMB-214ENST00000492858 KCNQ3O43525 872 aa16.29■□□□□ 0.2
GPNMB-214ENST00000492858 DIAPH1O60610 1272 aaKnown RBP16.29■□□□□ 0.2
GPNMB-214ENST00000492858 SCNN1DP51172 638 aa16.29■□□□□ 0.2
GPNMB-214ENST00000492858 PSMD1Q99460 953 aa16.29■□□□□ 0.2
GPNMB-214ENST00000492858 NIP7Q9Y221 180 aaKnown RBP eCLIP16.29■□□□□ 0.2
GPNMB-214ENST00000492858 LTBP1Q14766 1721 aa16.28■□□□□ 0.2
GPNMB-214ENST00000492858 CA12O43570 354 aa16.28■□□□□ 0.2
GPNMB-214ENST00000492858 USP16Q9Y5T5 823 aa16.28■□□□□ 0.2
GPNMB-214ENST00000492858 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
GPNMB-214ENST00000492858 COL4A5P29400 1685 aa16.27■□□□□ 0.2
GPNMB-214ENST00000492858 HSPA5P11021 654 aaKnown RBP16.27■□□□□ 0.2
GPNMB-214ENST00000492858 EIF4G2P78344 907 aaKnown RBP eCLIP16.27■□□□□ 0.2
GPNMB-214ENST00000492858 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.2
GPNMB-214ENST00000492858 USP50Q70EL3 339 aaPredicted RBP16.27■□□□□ 0.2
GPNMB-214ENST00000492858 GAS2L2Q8NHY3 880 aa16.27■□□□□ 0.2
GPNMB-214ENST00000492858 PRAMEF22A3QJZ6 481 aa16.26■□□□□ 0.19
GPNMB-214ENST00000492858 BTBD11A6QL63 1104 aa16.26■□□□□ 0.19
GPNMB-214ENST00000492858 GTF2E1P29083 439 aaPredicted RBP16.26■□□□□ 0.19
GPNMB-214ENST00000492858 DGKZQ13574 1117 aa16.26■□□□□ 0.19
GPNMB-214ENST00000492858 SAPCD2Q86UD0 394 aa16.25■□□□□ 0.19
GPNMB-214ENST00000492858 LARGE2Q8N3Y3 721 aa16.25■□□□□ 0.19
GPNMB-214ENST00000492858 SIPA1L3O60292 1781 aaPredicted RBP16.24■□□□□ 0.19
GPNMB-214ENST00000492858 CELF2O95319 508 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms