RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 SPG7Q9UQ90 795 aa15.63■□□□□ 0.09
PRAME-213ENST00000492657 MRE11P49959 708 aa15.63■□□□□ 0.09
PRAME-213ENST00000492657 COPS6Q7L5N1 327 aa15.63■□□□□ 0.09
PRAME-213ENST00000492657 NUCB2P80303 420 aa15.63■□□□□ 0.09
PRAME-213ENST00000492657 HSP90AB4PQ58FF6 505 aa15.62■□□□□ 0.09
PRAME-213ENST00000492657 CWC27Q6UX04 472 aaKnown RBP15.62■□□□□ 0.09
PRAME-213ENST00000492657 KLHDC4Q8TBB5 520 aa15.62■□□□□ 0.09
PRAME-213ENST00000492657 CLEC17AQ6ZS10 378 aa15.62■□□□□ 0.09
PRAME-213ENST00000492657 IFNL2Q8IZJ0 200 aa15.62■□□□□ 0.09
PRAME-213ENST00000492657 CLASRPQ8N2M8 674 aaKnown RBP15.62■□□□□ 0.09
PRAME-213ENST00000492657 GRPEL1Q9HAV7 217 aa15.62■□□□□ 0.09
PRAME-213ENST00000492657 SGSM2O43147 1006 aa15.61■□□□□ 0.09
PRAME-213ENST00000492657 DDX58O95786 925 aaKnown RBP15.61■□□□□ 0.09
PRAME-213ENST00000492657 SIL1Q9H173 461 aa15.61■□□□□ 0.09
PRAME-213ENST00000492657 CWC22Q9HCG8 908 aaKnown RBP15.61■□□□□ 0.09
PRAME-213ENST00000492657 CLCN1P35523 988 aa15.61■□□□□ 0.09
PRAME-213ENST00000492657 COL18A1P39060 1754 aa15.6■□□□□ 0.09
PRAME-213ENST00000492657 SASH1O94885 1247 aa15.6■□□□□ 0.09
PRAME-213ENST00000492657 EPHA10Q5JZY3 1008 aa15.6■□□□□ 0.09
PRAME-213ENST00000492657 CNTROBQ8N137 903 aa15.6■□□□□ 0.09
PRAME-213ENST00000492657 MYD88Q99836 296 aa15.6■□□□□ 0.09
PRAME-213ENST00000492657 HSPA4P34932 840 aa15.6■□□□□ 0.09
PRAME-213ENST00000492657 SKOR2Q2VWA4 1001 aaPredicted RBP15.6■□□□□ 0.09
PRAME-213ENST00000492657 CADPS2Q86UW7 1296 aa15.6■□□□□ 0.09
PRAME-213ENST00000492657 AACSQ86V21 672 aa15.6■□□□□ 0.09
PRAME-213ENST00000492657 ARID3AQ99856 593 aa15.6■□□□□ 0.09
PRAME-213ENST00000492657 CCDC8Q9H0W5 538 aaPredicted RBP15.6■□□□□ 0.09
PRAME-213ENST00000492657 ADAMTS7Q9UKP4 1686 aa15.6■□□□□ 0.09
PRAME-213ENST00000492657 SCN11AQ9UI33 1791 aa15.6■□□□□ 0.09
PRAME-213ENST00000492657 C5P01031 1676 aa15.59■□□□□ 0.09
PRAME-213ENST00000492657 GOLGA6L22H0YM25 854 aa15.59■□□□□ 0.09
PRAME-213ENST00000492657 ANAPC15P60006 121 aa15.59■□□□□ 0.09
PRAME-213ENST00000492657 RASEFQ8IZ41 740 aa15.59■□□□□ 0.09
PRAME-213ENST00000492657 LARP6Q9BRS8 491 aaKnown RBP15.59■□□□□ 0.09
PRAME-213ENST00000492657 DDX49Q9Y6V7 483 aaKnown RBP15.59■□□□□ 0.09
PRAME-213ENST00000492657 NEURL1BA8MQ27 555 aa15.59■□□□□ 0.09
PRAME-213ENST00000492657 IFIT2P09913 472 aaKnown RBP15.59■□□□□ 0.09
PRAME-213ENST00000492657 LSG1Q9H089 658 aaKnown RBP15.59■□□□□ 0.09
PRAME-213ENST00000492657 SPATA31A3Q5VYP0 1347 aa15.59■□□□□ 0.09
PRAME-213ENST00000492657 GLRX3O76003 335 aaKnown RBP15.58■□□□□ 0.09
PRAME-213ENST00000492657 GLIPR1L2Q4G1C9 344 aa15.58■□□□□ 0.09
PRAME-213ENST00000492657 LARP1Q6PKG0 1096 aaKnown RBP15.58■□□□□ 0.09
PRAME-213ENST00000492657 EAF2Q96CJ1 260 aaPredicted RBP15.58■□□□□ 0.09
PRAME-213ENST00000492657 ECHDC1Q9NTX5 307 aa15.58■□□□□ 0.09
PRAME-213ENST00000492657 TLR7Q9NYK1 1049 aaKnown RBP15.58■□□□□ 0.08
PRAME-213ENST00000492657 UTYO14607 1347 aa15.58■□□□□ 0.08
PRAME-213ENST00000492657 USP42Q9H9J4 1324 aaKnown RBP15.58■□□□□ 0.08
PRAME-213ENST00000492657 NCLP19338 710 aaKnown RBP15.58■□□□□ 0.08
PRAME-213ENST00000492657 TNS3Q68CZ2 1445 aa15.58■□□□□ 0.08
PRAME-213ENST00000492657 TTC5Q8N0Z6 440 aa15.58■□□□□ 0.08
PRAME-213ENST00000492657 DCAF5Q96JK2 942 aa15.58■□□□□ 0.08
PRAME-213ENST00000492657 LMBRD1Q9NUN5 540 aa15.58■□□□□ 0.08
PRAME-213ENST00000492657 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.58■□□□□ 0.08
PRAME-213ENST00000492657 SNX14Q9Y5W7 946 aa15.58■□□□□ 0.08
PRAME-213ENST00000492657 G3BP1Q13283 466 aaKnown RBP eCLIP15.57■□□□□ 0.08
PRAME-213ENST00000492657 GCKRQ14397 625 aa15.57■□□□□ 0.08
PRAME-213ENST00000492657 LRP10Q7Z4F1 713 aa15.57■□□□□ 0.08
PRAME-213ENST00000492657 TTC41PQ6P2S7 1318 aa15.57■□□□□ 0.08
PRAME-213ENST00000492657 PRPF40AO75400 957 aaKnown RBP15.57■□□□□ 0.08
PRAME-213ENST00000492657 SNRPA1P09661 255 aaKnown RBP15.57■□□□□ 0.08
PRAME-213ENST00000492657 CPA1P15085 419 aa15.57■□□□□ 0.08
PRAME-213ENST00000492657 PTH1RQ03431 593 aa15.57■□□□□ 0.08
PRAME-213ENST00000492657 CUL4AQ13619 759 aa15.57■□□□□ 0.08
PRAME-213ENST00000492657 RAD50Q92878 1312 aa15.57■□□□□ 0.08
PRAME-213ENST00000492657 ESPNB1AK53 854 aa15.56■□□□□ 0.08
PRAME-213ENST00000492657 ATP5J2-PTCD1G3V325 749 aa15.56■□□□□ 0.08
PRAME-213ENST00000492657 PTCD1O75127 700 aaKnown RBP15.56■□□□□ 0.08
PRAME-213ENST00000492657 CABP4P57796 275 aa15.56■□□□□ 0.08
PRAME-213ENST00000492657 NEXNQ0ZGT2 675 aa15.56■□□□□ 0.08
PRAME-213ENST00000492657 ANKRD13DQ6ZTN6 518 aa15.56■□□□□ 0.08
PRAME-213ENST00000492657 METTL22Q9BUU2 404 aaPredicted RBP15.56■□□□□ 0.08
PRAME-213ENST00000492657 DIAPH3Q9NSV4 1193 aa15.56■□□□□ 0.08
PRAME-213ENST00000492657 MCM2P49736 904 aa15.56■□□□□ 0.08
PRAME-213ENST00000492657 CRYBG1Q9Y4K1 1723 aa15.56■□□□□ 0.08
PRAME-213ENST00000492657 DTNBO60941 627 aa15.55■□□□□ 0.08
PRAME-213ENST00000492657 PTMSP20962 102 aa15.55■□□□□ 0.08
PRAME-213ENST00000492657 BRINP3Q76B58 766 aa15.55■□□□□ 0.08
PRAME-213ENST00000492657 ERC1Q8IUD2 1116 aa15.55■□□□□ 0.08
PRAME-213ENST00000492657 KLHL40Q2TBA0 621 aa15.55■□□□□ 0.08
PRAME-213ENST00000492657 KIAA1211Q6ZU35 1233 aa15.55■□□□□ 0.08
PRAME-213ENST00000492657 IL17RAQ96F46 866 aa15.55■□□□□ 0.08
PRAME-213ENST00000492657 HDAC5Q9UQL6 1122 aa15.55■□□□□ 0.08
PRAME-213ENST00000492657 FOXD4L6Q3SYB3 417 aaPredicted RBP15.54■□□□□ 0.08
PRAME-213ENST00000492657 FOXD4L3Q6VB84 417 aaPredicted RBP15.54■□□□□ 0.08
PRAME-213ENST00000492657 DDX54Q8TDD1 881 aaKnown RBP15.54■□□□□ 0.08
PRAME-213ENST00000492657 FMNL2Q96PY5 1086 aa15.54■□□□□ 0.08
PRAME-213ENST00000492657 BOLA2Q9H3K6 86 aa15.54■□□□□ 0.08
PRAME-213ENST00000492657 DCCP43146 1447 aa15.53■□□□□ 0.08
PRAME-213ENST00000492657 CAVIN1Q6NZI2 390 aaKnown RBP15.53■□□□□ 0.08
PRAME-213ENST00000492657 LMTK3Q96Q04 1460 aa15.53■□□□□ 0.08
PRAME-213ENST00000492657 UBE3BQ7Z3V4 1068 aa15.53■□□□□ 0.08
PRAME-213ENST00000492657 FAM227BQ96M60 508 aa15.53■□□□□ 0.08
PRAME-213ENST00000492657 GPATCH3Q96I76 525 aa15.53■□□□□ 0.08
PRAME-213ENST00000492657 PRDM11Q9NQV5 511 aa15.53■□□□□ 0.08
PRAME-213ENST00000492657 RBM27Q9P2N5 1060 aaKnown RBP15.53■□□□□ 0.08
PRAME-213ENST00000492657 ISY1Q9ULR0 285 aaKnown RBP15.53■□□□□ 0.08
PRAME-213ENST00000492657 PRPF40BQ6NWY9 871 aaKnown RBP15.52■□□□□ 0.08
PRAME-213ENST00000492657 TOM1L2Q6ZVM7 507 aa15.52■□□□□ 0.08
PRAME-213ENST00000492657 GPT2Q8TD30 523 aa15.52■□□□□ 0.08
PRAME-213ENST00000492657 TRIM44Q96DX7 344 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms