RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 PLEKHF1Q96S99 279 aa19.33■□□□□ 0.68
SS18L1-205ENST00000492466 CCDC88AQ3V6T2 1871 aa19.33■□□□□ 0.68
SS18L1-205ENST00000492466 TAF7Q15545 349 aaPredicted RBP19.32■□□□□ 0.68
SS18L1-205ENST00000492466 CLEC4GQ6UXB4 293 aa19.32■□□□□ 0.68
SS18L1-205ENST00000492466 ZNF622Q969S3 477 aaKnown RBP eCLIP19.32■□□□□ 0.687e-6■■□□□ 12.8
SS18L1-205ENST00000492466 MIS18AQ9NYP9 233 aa19.32■□□□□ 0.68
SS18L1-205ENST00000492466 TNRC6CQ9HCJ0 1690 aaKnown RBP19.32■□□□□ 0.68
SS18L1-205ENST00000492466 GLTPD2A6NH11 291 aa19.31■□□□□ 0.68
SS18L1-205ENST00000492466 C21orf2O43822 256 aa19.31■□□□□ 0.68
SS18L1-205ENST00000492466 SRGNP10124 158 aa19.31■□□□□ 0.68
SS18L1-205ENST00000492466 CNBD1Q8NA66 436 aa19.31■□□□□ 0.68
SS18L1-205ENST00000492466 FER1L6Q2WGJ9 1857 aa19.31■□□□□ 0.68
SS18L1-205ENST00000492466 FSTL1Q12841 308 aa19.3■□□□□ 0.68
SS18L1-205ENST00000492466 NFE2L2Q16236 605 aa19.3■□□□□ 0.68
SS18L1-205ENST00000492466 NPM2Q86SE8 214 aaKnown RBP19.3■□□□□ 0.68
SS18L1-205ENST00000492466 CCDC146Q8IYE0 955 aa19.3■□□□□ 0.68
SS18L1-205ENST00000492466 C16orf71Q8IYS4 520 aaPredicted RBP19.29■□□□□ 0.68
SS18L1-205ENST00000492466 SLX4Q8IY92 1834 aa19.29■□□□□ 0.68
SS18L1-205ENST00000492466 POTECB2RU33 542 aa19.28■□□□□ 0.68
SS18L1-205ENST00000492466 RGL2O15211 777 aa19.28■□□□□ 0.68
SS18L1-205ENST00000492466 STYK1Q6J9G0 422 aa19.28■□□□□ 0.68
SS18L1-205ENST00000492466 TIAM2Q8IVF5 1701 aa19.28■□□□□ 0.68
SS18L1-205ENST00000492466 KLRG2A4D1S0 409 aaPredicted RBP19.27■□□□□ 0.68
SS18L1-205ENST00000492466 ST5P78524 1137 aa19.27■□□□□ 0.68
SS18L1-205ENST00000492466 HTRA3P83110 453 aa19.27■□□□□ 0.68
SS18L1-205ENST00000492466 C7orf43Q8WVR3 580 aa19.27■□□□□ 0.68
SS18L1-205ENST00000492466 MRS2Q9HD23 443 aa19.27■□□□□ 0.68
SS18L1-205ENST00000492466 ZNF219Q9P2Y4 722 aaPredicted RBP19.27■□□□□ 0.68
SS18L1-205ENST00000492466 WDR90Q96KV7 1748 aa19.27■□□□□ 0.68
SS18L1-205ENST00000492466 KDM3BQ7LBC6 1761 aa19.27■□□□□ 0.67
SS18L1-205ENST00000492466 DICER1Q9UPY3 1922 aaKnown RBP19.26■□□□□ 0.67
SS18L1-205ENST00000492466 HLFQ16534 295 aa19.26■□□□□ 0.67
SS18L1-205ENST00000492466 PRPF40BQ6NWY9 871 aaKnown RBP19.26■□□□□ 0.67
SS18L1-205ENST00000492466 CNKSR1Q969H4 720 aa19.26■□□□□ 0.67
SS18L1-205ENST00000492466 MASTLQ96GX5 879 aa19.26■□□□□ 0.67
SS18L1-205ENST00000492466 LTBP3Q9NS15 1303 aa19.25■□□□□ 0.67
SS18L1-205ENST00000492466 VEGFAP15692 232 aaPredicted RBP19.25■□□□□ 0.67
SS18L1-205ENST00000492466 LMOD3Q0VAK6 560 aa19.25■□□□□ 0.67
SS18L1-205ENST00000492466 IFFO2Q5TF58 517 aa19.25■□□□□ 0.67
SS18L1-205ENST00000492466 NBPF5PQ86XG9 351 aaPredicted RBP19.25■□□□□ 0.67
SS18L1-205ENST00000492466 RUNDC1Q96C34 613 aa19.25■□□□□ 0.67
SS18L1-205ENST00000492466 THUMPD2Q9BTF0 503 aaKnown RBP19.25■□□□□ 0.67
SS18L1-205ENST00000492466 ZNF652Q9Y2D9 606 aa19.25■□□□□ 0.67
SS18L1-205ENST00000492466 LAMB4A4D0S4 1761 aa19.24■□□□□ 0.67
SS18L1-205ENST00000492466 ARFGEF2Q9Y6D5 1785 aa19.24■□□□□ 0.67
SS18L1-205ENST00000492466 EIF4A1P60842 406 aaKnown RBP19.24■□□□□ 0.67
SS18L1-205ENST00000492466 NEUROD2Q15784 382 aa19.24■□□□□ 0.67
SS18L1-205ENST00000492466 ADAMTS8Q9UP79 889 aa19.24■□□□□ 0.67
SS18L1-205ENST00000492466 NIP7Q9Y221 180 aaKnown RBP eCLIP19.24■□□□□ 0.67
SS18L1-205ENST00000492466 CACNA1SQ13698 1873 aa19.23■□□□□ 0.67
SS18L1-205ENST00000492466 RIPK4P57078 832 aa19.23■□□□□ 0.67
SS18L1-205ENST00000492466 ERFEQ4G0M1 354 aa19.23■□□□□ 0.67
SS18L1-205ENST00000492466 SMC1BQ8NDV3 1235 aa19.23■□□□□ 0.67
SS18L1-205ENST00000492466 PNISRQ8TF01 805 aaKnown RBP19.23■□□□□ 0.67
SS18L1-205ENST00000492466 RRP7AQ9Y3A4 280 aaKnown RBP19.23■□□□□ 0.67
SS18L1-205ENST00000492466 NPHP1O15259 732 aa19.22■□□□□ 0.67
SS18L1-205ENST00000492466 TPTE2Q6XPS3 522 aa19.22■□□□□ 0.67
SS18L1-205ENST00000492466 TAOK3Q9H2K8 898 aa19.22■□□□□ 0.67
SS18L1-205ENST00000492466 NPR1P16066 1061 aa19.2■□□□□ 0.66
SS18L1-205ENST00000492466 TMPOP42166 694 aaKnown RBP19.2■□□□□ 0.66
SS18L1-205ENST00000492466 TTLL7Q6ZT98 887 aa19.2■□□□□ 0.66
SS18L1-205ENST00000492466 KLRG1Q96E93 195 aa19.2■□□□□ 0.66
SS18L1-205ENST00000492466 FAM177BA6PVY3 158 aa19.19■□□□□ 0.66
SS18L1-205ENST00000492466 ERVV-1B6SEH8 477 aa19.19■□□□□ 0.66
SS18L1-205ENST00000492466 SOGA3Q5TF21 947 aa19.19■□□□□ 0.66
SS18L1-205ENST00000492466 DPY19L2Q6NUT2 758 aa19.19■□□□□ 0.66
SS18L1-205ENST00000492466 OLFM4Q6UX06 510 aa19.19■□□□□ 0.66
SS18L1-205ENST00000492466 JMYQ8N9B5 988 aa19.19■□□□□ 0.66
SS18L1-205ENST00000492466 CCDC184Q52MB2 194 aa19.18■□□□□ 0.66
SS18L1-205ENST00000492466 LRP10Q7Z4F1 713 aa19.18■□□□□ 0.66
SS18L1-205ENST00000492466 NGEFQ8N5V2 710 aa19.18■□□□□ 0.66
SS18L1-205ENST00000492466 MAP3K15Q6ZN16 1313 aa19.18■□□□□ 0.66
SS18L1-205ENST00000492466 NUP98P52948 1817 aa19.18■□□□□ 0.66
SS18L1-205ENST00000492466 DDNO94850 711 aaPredicted RBP19.17■□□□□ 0.66
SS18L1-205ENST00000492466 ABCC12Q96J65 1359 aa19.17■□□□□ 0.66
SS18L1-205ENST00000492466 SNED1Q8TER0 1413 aa19.17■□□□□ 0.66
SS18L1-205ENST00000492466 CRY2Q49AN0 593 aa19.16■□□□□ 0.66
SS18L1-205ENST00000492466 CCDC93Q567U6 631 aa19.16■□□□□ 0.66
SS18L1-205ENST00000492466 MYL6BP14649 208 aa19.15■□□□□ 0.66
SS18L1-205ENST00000492466 PDIA6Q15084 440 aa19.15■□□□□ 0.66
SS18L1-205ENST00000492466 NUTM1Q86Y26 1132 aa19.15■□□□□ 0.66
SS18L1-205ENST00000492466 UBN2Q6ZU65 1347 aa19.15■□□□□ 0.66
SS18L1-205ENST00000492466 FKBP4Q02790 459 aaKnown RBP eCLIP19.14■□□□□ 0.65
SS18L1-205ENST00000492466 TSPYL4Q9UJ04 414 aa19.14■□□□□ 0.65
SS18L1-205ENST00000492466 LAS1LQ9Y4W2 734 aaKnown RBP19.14■□□□□ 0.65
SS18L1-205ENST00000492466 APAF1O14727 1248 aa19.13■□□□□ 0.65
SS18L1-205ENST00000492466 POTEIP0CG38 1075 aa19.13■□□□□ 0.65
SS18L1-205ENST00000492466 POTEJP0CG39 1038 aa19.13■□□□□ 0.65
SS18L1-205ENST00000492466 SUSD4Q5VX71 490 aa19.13■□□□□ 0.65
SS18L1-205ENST00000492466 ZNF34Q8IZ26 560 aa19.13■□□□□ 0.65
SS18L1-205ENST00000492466 ZBTB3Q9H5J0 574 aa19.13■□□□□ 0.65
SS18L1-205ENST00000492466 ZNF277Q9NRM2 450 aaPredicted RBP19.13■□□□□ 0.65
SS18L1-205ENST00000492466 ERBB4Q15303 1308 aa19.13■□□□□ 0.65
SS18L1-205ENST00000492466 GPTP24298 496 aa19.12■□□□□ 0.65
SS18L1-205ENST00000492466 ALDH1B1P30837 517 aa19.12■□□□□ 0.65
SS18L1-205ENST00000492466 L3MBTL3Q96JM7 780 aaPredicted RBP19.12■□□□□ 0.65
SS18L1-205ENST00000492466 NYXQ9GZU5 481 aa19.12■□□□□ 0.65
SS18L1-205ENST00000492466 RIC1Q4ADV7 1423 aa19.11■□□□□ 0.65
SS18L1-205ENST00000492466 IBTKQ9P2D0 1353 aaPredicted RBP19.11■□□□□ 0.65
SS18L1-205ENST00000492466 GTF2E1P29083 439 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms