RNA–Protein interactions for RNA: ENST00000492337.5

SOX2-OT-213, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 2,508 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-213ENST00000492337 KCNQ3O43525 872 aa12.16□□□□□ -0.46
SOX2-OT-213ENST00000492337 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.16□□□□□ -0.46
SOX2-OT-213ENST00000492337 CAMTA1Q9Y6Y1 1673 aa12.16□□□□□ -0.46
SOX2-OT-213ENST00000492337 CHD2O14647 1828 aaKnown RBP12.16□□□□□ -0.46
SOX2-OT-213ENST00000492337 SYT1P21579 422 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 HYPKQ9NX55 129 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 DBF4Q9UBU7 674 aaPredicted RBP12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 ADAMTS7Q9UKP4 1686 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 STX6O43752 255 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 CSPP1Q1MSJ5 1256 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 CCDC183Q5T5S1 534 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 VPS53Q5VIR6 699 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 RUFY2Q8WXA3 655 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 ZSWIM6Q9HCJ5 1215 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 UTYO14607 1347 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 RGPD2P0DJD1 1756 aa12.15□□□□□ -0.46
SOX2-OT-213ENST00000492337 BTBD11A6QL63 1104 aa12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 LETM1O95202 739 aaPredicted RBP12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 F13A1P00488 732 aa12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 UBE2HP62256 183 aa12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 CWC27Q6UX04 472 aaKnown RBP12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 ERC1Q8IUD2 1116 aa12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 KCNH5Q8NCM2 988 aa12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 RNF214Q8ND24 703 aa12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 ECHDC1Q9NTX5 307 aa12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 SLIT3O75094 1523 aa12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 TCHHQ07283 1943 aa12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 SIPA1L3O60292 1781 aaPredicted RBP12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 AMOTQ4VCS5 1084 aa12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 PLEKHO1Q53GL0 409 aaPredicted RBP12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 CLASRPQ8N2M8 674 aaKnown RBP12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 HDAC5Q9UQL6 1122 aa12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 PXDNQ92626 1479 aa12.14□□□□□ -0.47
SOX2-OT-213ENST00000492337 RNMTO43148 476 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 PTH1RQ03431 593 aa12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 TEFQ10587 303 aa12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 NECTIN1Q15223 517 aa12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 ZSCAN31Q96LW9 406 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 SH2B1Q9NRF2 756 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 SPG7Q9UQ90 795 aa12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 CNPY2Q9Y2B0 182 aa12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 ATP6V1DQ9Y5K8 247 aa12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 GIGYF1O75420 1035 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 LARGE1O95461 756 aa12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 XPCQ01831 940 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 ZNF530Q6P9A1 599 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 EVI5LQ96CN4 794 aa12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 SMC3Q9UQE7 1217 aa12.13□□□□□ -0.47
SOX2-OT-213ENST00000492337 ANXA1P04083 346 aa12.12□□□□□ -0.47
SOX2-OT-213ENST00000492337 CASTP20810 708 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-213ENST00000492337 FUCA2Q9BTY2 467 aa12.12□□□□□ -0.47
SOX2-OT-213ENST00000492337 DIAPH3Q9NSV4 1193 aa12.12□□□□□ -0.47
SOX2-OT-213ENST00000492337 MRC1P22897 1456 aa12.12□□□□□ -0.47
SOX2-OT-213ENST00000492337 ST3GAL1Q11201 340 aa12.12□□□□□ -0.47
SOX2-OT-213ENST00000492337 GPATCH3Q96I76 525 aa12.12□□□□□ -0.47
SOX2-OT-213ENST00000492337 MTMR6Q9Y217 621 aa12.12□□□□□ -0.47
SOX2-OT-213ENST00000492337 MAP3K2Q9Y2U5 619 aa12.12□□□□□ -0.47
SOX2-OT-213ENST00000492337 ADCK5Q3MIX3 580 aa12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 PDCL3Q9H2J4 239 aa12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 CCDC171Q6TFL3 1326 aa12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 PDIA4P13667 645 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 PROSER3Q2NL68 480 aa12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 FOXD4L6Q3SYB3 417 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 FOXD4L3Q6VB84 417 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 MPRIPQ6WCQ1 1025 aa12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 ARHGEF25Q86VW2 580 aa12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 KAZALD1Q96I82 304 aa12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 PDRG1Q9NUG6 133 aa12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 R3HCC1Q9Y3T6 440 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 JCADQ9P266 1359 aa12.11□□□□□ -0.47
SOX2-OT-213ENST00000492337 HIP1O00291 1037 aa12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 OS9Q13438 667 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 LINS1Q8NG48 757 aa12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 MAP4K1Q92918 833 aa12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 LRRC59Q96AG4 307 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 CYP46A1Q9Y6A2 500 aa12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 SASH1O94885 1247 aa12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 IFIT2P09913 472 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 CPA1P15085 419 aa12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 GJB2P29033 226 aa12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 GLIPR1L2Q4G1C9 344 aa12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 JAKMIP1Q96N16 626 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 ALDH8A1Q9H2A2 487 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 C9orf78Q9NZ63 289 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 PA2G4Q9UQ80 394 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
SOX2-OT-213ENST00000492337 GRM8O00222 908 aa12.09□□□□□ -0.47
SOX2-OT-213ENST00000492337 ME3Q16798 604 aa12.09□□□□□ -0.47
SOX2-OT-213ENST00000492337 CCDC83Q8IWF9 413 aa12.09□□□□□ -0.47
SOX2-OT-213ENST00000492337 LARP6Q9BRS8 491 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-213ENST00000492337 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-213ENST00000492337 C1orf141Q5JVX7 400 aa12.08□□□□□ -0.48
SOX2-OT-213ENST00000492337 CREB3L3Q68CJ9 461 aa12.08□□□□□ -0.48
SOX2-OT-213ENST00000492337 SUCLG2Q96I99 432 aa12.08□□□□□ -0.48
SOX2-OT-213ENST00000492337 RBM8AQ9Y5S9 174 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms