RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 ARFGEF2Q9Y6D5 1785 aa16.8■□□□□ 0.28
TREX1-204ENST00000492235 LTBP3Q9NS15 1303 aa16.8■□□□□ 0.28
TREX1-204ENST00000492235 BTBD11A6QL63 1104 aa16.8■□□□□ 0.28
TREX1-204ENST00000492235 DDNO94850 711 aaPredicted RBP16.8■□□□□ 0.28
TREX1-204ENST00000492235 POTEIP0CG38 1075 aa16.8■□□□□ 0.28
TREX1-204ENST00000492235 POTEJP0CG39 1038 aa16.8■□□□□ 0.28
TREX1-204ENST00000492235 PIP4K2AP48426 406 aaPredicted RBP16.8■□□□□ 0.28
TREX1-204ENST00000492235 STYK1Q6J9G0 422 aa16.8■□□□□ 0.28
TREX1-204ENST00000492235 CHADLQ6NUI6 762 aa16.8■□□□□ 0.28
TREX1-204ENST00000492235 SRGNP10124 158 aa16.79■□□□□ 0.28
TREX1-204ENST00000492235 DZIP3Q86Y13 1208 aaKnown RBP16.79■□□□□ 0.28
TREX1-204ENST00000492235 CEMIPQ8WUJ3 1361 aa16.78■□□□□ 0.28
TREX1-204ENST00000492235 MASTLQ96GX5 879 aa16.78■□□□□ 0.28
TREX1-204ENST00000492235 PHACTR3Q96KR7 559 aa16.78■□□□□ 0.28
TREX1-204ENST00000492235 MKRN1Q9UHC7 482 aaKnown RBP16.78■□□□□ 0.28
TREX1-204ENST00000492235 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
TREX1-204ENST00000492235 PRKAR2BP31323 418 aa16.77■□□□□ 0.28
TREX1-204ENST00000492235 SOGA3Q5TF21 947 aa16.77■□□□□ 0.28
TREX1-204ENST00000492235 CREBZFQ9NS37 354 aa16.77■□□□□ 0.28
TREX1-204ENST00000492235 PRAMEF22A3QJZ6 481 aa16.76■□□□□ 0.27
TREX1-204ENST00000492235 NBPF5PQ86XG9 351 aaPredicted RBP16.76■□□□□ 0.27
TREX1-204ENST00000492235 NPC1L1Q9UHC9 1359 aa16.76■□□□□ 0.27
TREX1-204ENST00000492235 RSPH6AQ9H0K4 717 aa16.75■□□□□ 0.27
TREX1-204ENST00000492235 CCDC93Q567U6 631 aa16.74■□□□□ 0.27
TREX1-204ENST00000492235 ZNF652Q9Y2D9 606 aa16.74■□□□□ 0.27
TREX1-204ENST00000492235 SCN4AP35499 1836 aa16.74■□□□□ 0.27
TREX1-204ENST00000492235 IQCA1LA6NCM1 817 aa16.73■□□□□ 0.27
TREX1-204ENST00000492235 SLC34A2O95436 690 aa16.73■□□□□ 0.27
TREX1-204ENST00000492235 NPR1P16066 1061 aa16.73■□□□□ 0.27
TREX1-204ENST00000492235 CLEC4GQ6UXB4 293 aa16.73■□□□□ 0.27
TREX1-204ENST00000492235 MCM10Q7L590 875 aa16.73■□□□□ 0.27
TREX1-204ENST00000492235 C7orf43Q8WVR3 580 aa16.73■□□□□ 0.27
TREX1-204ENST00000492235 FAM177BA6PVY3 158 aa16.72■□□□□ 0.27
TREX1-204ENST00000492235 SNRPA1P09661 255 aaKnown RBP16.72■□□□□ 0.27
TREX1-204ENST00000492235 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
TREX1-204ENST00000492235 LDHDQ86WU2 507 aa16.72■□□□□ 0.27
TREX1-204ENST00000492235 L3MBTL3Q96JM7 780 aaPredicted RBP16.72■□□□□ 0.27
TREX1-204ENST00000492235 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
TREX1-204ENST00000492235 TAF1DQ9H5J8 278 aaPredicted RBP16.72■□□□□ 0.27
TREX1-204ENST00000492235 ZNF277Q9NRM2 450 aaPredicted RBP16.72■□□□□ 0.27
TREX1-204ENST00000492235 FKBP4Q02790 459 aaKnown RBP eCLIP16.71■□□□□ 0.27
TREX1-204ENST00000492235 EAPPQ56P03 285 aaPredicted RBP16.71■□□□□ 0.27
TREX1-204ENST00000492235 RTF1Q92541 710 aaKnown RBP16.71■□□□□ 0.27
TREX1-204ENST00000492235 NIP7Q9Y221 180 aaKnown RBP eCLIP16.71■□□□□ 0.27
TREX1-204ENST00000492235 CNTNAP1P78357 1384 aa16.71■□□□□ 0.27
TREX1-204ENST00000492235 PASKQ96RG2 1323 aa16.7■□□□□ 0.26
TREX1-204ENST00000492235 ZNF541Q9H0D2 1346 aa16.7■□□□□ 0.26
TREX1-204ENST00000492235 NBPF26B4DH59 902 aa16.7■□□□□ 0.26
TREX1-204ENST00000492235 DCTN1Q14203 1278 aa16.7■□□□□ 0.26
TREX1-204ENST00000492235 NBPF10Q6P3W6 841 aaKnown RBP16.7■□□□□ 0.26
TREX1-204ENST00000492235 TPTE2Q6XPS3 522 aa16.7■□□□□ 0.26
TREX1-204ENST00000492235 NBPF15Q8N660 670 aa16.7■□□□□ 0.26
TREX1-204ENST00000492235 KLRG2A4D1S0 409 aaPredicted RBP16.69■□□□□ 0.26
TREX1-204ENST00000492235 FOXN1O15353 648 aa16.69■□□□□ 0.26
TREX1-204ENST00000492235 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
TREX1-204ENST00000492235 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
TREX1-204ENST00000492235 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
TREX1-204ENST00000492235 NUDCQ9Y266 331 aa16.69■□□□□ 0.26
TREX1-204ENST00000492235 HACL1Q9UJ83 578 aa16.68■□□□□ 0.26
TREX1-204ENST00000492235 TMEM88BA6NKF7 163 aa16.67■□□□□ 0.26
TREX1-204ENST00000492235 ITGBL1O95965 494 aaPredicted RBP16.67■□□□□ 0.26
TREX1-204ENST00000492235 GTF2E1P29083 439 aaPredicted RBP16.67■□□□□ 0.26
TREX1-204ENST00000492235 EPHX2P34913 555 aa16.67■□□□□ 0.26
TREX1-204ENST00000492235 HLFQ16534 295 aa16.67■□□□□ 0.26
TREX1-204ENST00000492235 RTKN2Q8IZC4 609 aa16.67■□□□□ 0.26
TREX1-204ENST00000492235 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
TREX1-204ENST00000492235 ALDH1B1P30837 517 aa16.66■□□□□ 0.26
TREX1-204ENST00000492235 IARSP41252 1262 aaKnown RBP16.66■□□□□ 0.26
TREX1-204ENST00000492235 VEGFBP49765 207 aa16.66■□□□□ 0.26
TREX1-204ENST00000492235 SYNE4Q8N205 404 aa16.66■□□□□ 0.26
TREX1-204ENST00000492235 LAMB4A4D0S4 1761 aa16.66■□□□□ 0.26
TREX1-204ENST00000492235 ADAMTSL1Q8N6G6 1762 aa16.66■□□□□ 0.26
TREX1-204ENST00000492235 RGL2O15211 777 aa16.65■□□□□ 0.26
TREX1-204ENST00000492235 AIDAQ96BJ3 306 aa16.65■□□□□ 0.26
TREX1-204ENST00000492235 MIS18AQ9NYP9 233 aa16.65■□□□□ 0.26
TREX1-204ENST00000492235 FZD9O00144 591 aa16.64■□□□□ 0.25
TREX1-204ENST00000492235 PPP2R1AP30153 589 aa16.64■□□□□ 0.25
TREX1-204ENST00000492235 TAF7Q15545 349 aaPredicted RBP16.64■□□□□ 0.25
TREX1-204ENST00000492235 MAP1SQ66K74 1059 aaPredicted RBP16.64■□□□□ 0.25
TREX1-204ENST00000492235 NGEFQ8N5V2 710 aa16.64■□□□□ 0.25
TREX1-204ENST00000492235 ABCC12Q96J65 1359 aa16.64■□□□□ 0.25
TREX1-204ENST00000492235 HTATSF1O43719 755 aaKnown RBP16.63■□□□□ 0.25
TREX1-204ENST00000492235 CTCFP49711 727 aaPredicted RBP16.63■□□□□ 0.25
TREX1-204ENST00000492235 PNMA8AQ86V59 439 aaPredicted RBP16.63■□□□□ 0.25
TREX1-204ENST00000492235 NUTM1Q86Y26 1132 aa16.63■□□□□ 0.25
TREX1-204ENST00000492235 CNTROBQ8N137 903 aa16.63■□□□□ 0.25
TREX1-204ENST00000492235 PRDM10Q9NQV6 1147 aa16.63■□□□□ 0.25
TREX1-204ENST00000492235 NUP98P52948 1817 aa16.63■□□□□ 0.25
TREX1-204ENST00000492235 GPC2Q8N158 579 aa16.62■□□□□ 0.25
TREX1-204ENST00000492235 JDP2Q8WYK2 163 aa16.62■□□□□ 0.25
TREX1-204ENST00000492235 SNED1Q8TER0 1413 aa16.62■□□□□ 0.25
TREX1-204ENST00000492235 PSMD1Q99460 953 aa16.61■□□□□ 0.25
TREX1-204ENST00000492235 NYXQ9GZU5 481 aa16.61■□□□□ 0.25
TREX1-204ENST00000492235 WBP1LQ9NX94 342 aa16.61■□□□□ 0.25
TREX1-204ENST00000492235 GJA3Q9Y6H8 435 aa16.61■□□□□ 0.25
TREX1-204ENST00000492235 DLG5Q8TDM6 1919 aa16.6■□□□□ 0.25
TREX1-204ENST00000492235 COL4A5P29400 1685 aa16.6■□□□□ 0.25
TREX1-204ENST00000492235 KDM3BQ7LBC6 1761 aa16.6■□□□□ 0.25
TREX1-204ENST00000492235 RASSF10A6NK89 507 aa16.6■□□□□ 0.25
TREX1-204ENST00000492235 LBX1P52954 281 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms