RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 ZNF428Q96B54 188 aa29.79■■■□□ 2.36
SCN5A-213ENST00000491944 MAP3K15Q6ZN16 1313 aa29.78■■■□□ 2.36
SCN5A-213ENST00000491944 FKBP8Q14318 412 aa29.78■■■□□ 2.36
SCN5A-213ENST00000491944 ZBTB3Q9H5J0 574 aa29.78■■■□□ 2.36
SCN5A-213ENST00000491944 NLGN1Q8N2Q7 840 aa29.77■■■□□ 2.36
SCN5A-213ENST00000491944 BCL2L12Q9HB09 334 aa29.77■■■□□ 2.36
SCN5A-213ENST00000491944 SPON1Q9HCB6 807 aa29.77■■■□□ 2.36
SCN5A-213ENST00000491944 ZNF652Q9Y2D9 606 aa29.77■■■□□ 2.36
SCN5A-213ENST00000491944 NUP98P52948 1817 aa29.76■■■□□ 2.35
SCN5A-213ENST00000491944 BCL2L13Q9BXK5 485 aa29.76■■■□□ 2.35
SCN5A-213ENST00000491944 ERVV-1B6SEH8 477 aa29.75■■■□□ 2.35
SCN5A-213ENST00000491944 G2E3Q7L622 706 aa29.75■■■□□ 2.35
SCN5A-213ENST00000491944 SSH1Q8WYL5 1049 aa29.75■■■□□ 2.35
SCN5A-213ENST00000491944 COL24A1Q17RW2 1714 aa29.75■■■□□ 2.35
SCN5A-213ENST00000491944 HLFQ16534 295 aa29.74■■■□□ 2.35
SCN5A-213ENST00000491944 ALDH1L2Q3SY69 923 aa29.73■■■□□ 2.35
SCN5A-213ENST00000491944 ANKRD13DQ6ZTN6 518 aa29.73■■■□□ 2.35
SCN5A-213ENST00000491944 SMC4Q9NTJ3 1288 aa29.73■■■□□ 2.35
SCN5A-213ENST00000491944 DDX58O95786 925 aaKnown RBP29.72■■■□□ 2.35
SCN5A-213ENST00000491944 POLD1P28340 1107 aa29.72■■■□□ 2.35
SCN5A-213ENST00000491944 FLIIQ13045 1269 aa29.72■■■□□ 2.35
SCN5A-213ENST00000491944 CLEC4GQ6UXB4 293 aa29.72■■■□□ 2.35
SCN5A-213ENST00000491944 BICDL1Q6ZP65 573 aa29.72■■■□□ 2.35
SCN5A-213ENST00000491944 PLBD2Q8NHP8 589 aa29.72■■■□□ 2.35
SCN5A-213ENST00000491944 ARFGEF2Q9Y6D5 1785 aa29.71■■■□□ 2.35
SCN5A-213ENST00000491944 MMP10P09238 476 aa29.71■■■□□ 2.35
SCN5A-213ENST00000491944 TBC1D9BQ66K14 1250 aa29.71■■■□□ 2.35
SCN5A-213ENST00000491944 MRPL50Q8N5N7 158 aaKnown RBP29.71■■■□□ 2.35
SCN5A-213ENST00000491944 RGL2O15211 777 aa29.7■■■□□ 2.35
SCN5A-213ENST00000491944 RARSP54136 660 aaKnown RBP29.7■■■□□ 2.35
SCN5A-213ENST00000491944 RIC3Q7Z5B4 369 aa29.7■■■□□ 2.35
SCN5A-213ENST00000491944 FKBP5Q13451 457 aaPredicted RBP29.69■■■□□ 2.34
SCN5A-213ENST00000491944 NFIXQ14938 502 aa29.69■■■□□ 2.34
SCN5A-213ENST00000491944 GIGYF2Q6Y7W6 1299 aaKnown RBP29.69■■■□□ 2.34
SCN5A-213ENST00000491944 PTGER2P43116 358 aa29.68■■■□□ 2.34
SCN5A-213ENST00000491944 ANKRD36CQ5JPF3 1778 aa29.67■■■□□ 2.34
SCN5A-213ENST00000491944 SGIP1Q9BQI5 828 aa29.67■■■□□ 2.34
SCN5A-213ENST00000491944 TM4SF1P30408 202 aa29.66■■■□□ 2.34
SCN5A-213ENST00000491944 SETDB2Q96T68 719 aa29.66■■■□□ 2.34
SCN5A-213ENST00000491944 NIP7Q9Y221 180 aaKnown RBP eCLIP29.66■■■□□ 2.34
SCN5A-213ENST00000491944 PARP3Q9Y6F1 533 aa29.66■■■□□ 2.34
SCN5A-213ENST00000491944 DDR1Q08345 913 aa29.65■■■□□ 2.34
SCN5A-213ENST00000491944 MAP3K2Q9Y2U5 619 aa29.65■■■□□ 2.34
SCN5A-213ENST00000491944 ATP10DQ9P241 1426 aa29.65■■■□□ 2.34
SCN5A-213ENST00000491944 ADCY9O60503 1353 aa29.65■■■□□ 2.34
SCN5A-213ENST00000491944 PI4KAP2A4QPH2 592 aa29.64■■■□□ 2.34
SCN5A-213ENST00000491944 GPTP24298 496 aa29.64■■■□□ 2.34
SCN5A-213ENST00000491944 HSP90AB3PQ58FF7 597 aa29.64■■■□□ 2.34
SCN5A-213ENST00000491944 KSR2Q6VAB6 950 aa29.64■■■□□ 2.34
SCN5A-213ENST00000491944 PI4KAP1Q8N8J0 262 aa29.64■■■□□ 2.34
SCN5A-213ENST00000491944 LRP5O75197 1615 aa29.64■■■□□ 2.34
SCN5A-213ENST00000491944 CARMIL3Q8ND23 1372 aa29.63■■■□□ 2.33
SCN5A-213ENST00000491944 POLRMTO00411 1230 aaKnown RBP29.63■■■□□ 2.33
SCN5A-213ENST00000491944 TCIRG1Q13488 830 aa29.63■■■□□ 2.33
SCN5A-213ENST00000491944 PPP1R1BQ9UD71 204 aaPredicted RBP29.62■■■□□ 2.33
SCN5A-213ENST00000491944 AFDNP55196 1824 aaKnown RBP29.61■■■□□ 2.33
SCN5A-213ENST00000491944 BCAR3O75815 825 aa29.61■■■□□ 2.33
SCN5A-213ENST00000491944 ZNF34Q8IZ26 560 aa29.61■■■□□ 2.33
SCN5A-213ENST00000491944 PTPRCP08575 1304 aa29.61■■■□□ 2.33
SCN5A-213ENST00000491944 FAM177BA6PVY3 158 aa29.6■■■□□ 2.33
SCN5A-213ENST00000491944 SERPINB2P05120 415 aa29.6■■■□□ 2.33
SCN5A-213ENST00000491944 MYD88Q99836 296 aa29.6■■■□□ 2.33
SCN5A-213ENST00000491944 METTL22Q9BUU2 404 aaPredicted RBP29.6■■■□□ 2.33
SCN5A-213ENST00000491944 F6X3S4 739 aa29.59■■■□□ 2.33
SCN5A-213ENST00000491944 ATP5J2-PTCD1G3V325 749 aa29.59■■■□□ 2.33
SCN5A-213ENST00000491944 BRPF1P55201 1214 aaPredicted RBP29.59■■■□□ 2.33
SCN5A-213ENST00000491944 DNAAF4Q8WXU2 420 aa29.59■■■□□ 2.33
SCN5A-213ENST00000491944 NOB1Q9ULX3 412 aaKnown RBP29.59■■■□□ 2.33
SCN5A-213ENST00000491944 UBN2Q6ZU65 1347 aa29.59■■■□□ 2.33
SCN5A-213ENST00000491944 KIF16BQ96L93 1317 aa29.59■■■□□ 2.33
SCN5A-213ENST00000491944 NPHP1O15259 732 aa29.58■■■□□ 2.33
SCN5A-213ENST00000491944 NBPF5PQ86XG9 351 aaPredicted RBP29.58■■■□□ 2.33
SCN5A-213ENST00000491944 NEXNQ0ZGT2 675 aa29.57■■■□□ 2.32
SCN5A-213ENST00000491944 RCAN3Q9UKA8 241 aa29.57■■■□□ 2.32
SCN5A-213ENST00000491944 PARP10Q53GL7 1025 aa29.56■■■□□ 2.32
SCN5A-213ENST00000491944 KLHL34Q8N239 644 aa29.56■■■□□ 2.32
SCN5A-213ENST00000491944 NRXN2Q9P2S2 1712 aa29.56■■■□□ 2.32
SCN5A-213ENST00000491944 FRAT1Q92837 279 aaPredicted RBP29.55■■■□□ 2.32
SCN5A-213ENST00000491944 ISCA1Q9BUE6 129 aa29.55■■■□□ 2.32
SCN5A-213ENST00000491944 SUSD4Q5VX71 490 aa29.54■■■□□ 2.32
SCN5A-213ENST00000491944 NLRP10Q86W26 655 aa29.54■■■□□ 2.32
SCN5A-213ENST00000491944 CNBD1Q8NA66 436 aa29.54■■■□□ 2.32
SCN5A-213ENST00000491944 SLC4A10Q6U841 1118 aa29.53■■■□□ 2.32
SCN5A-213ENST00000491944 PPP1R42Q7Z4L9 355 aa29.53■■■□□ 2.32
SCN5A-213ENST00000491944 NYXQ9GZU5 481 aa29.52■■■□□ 2.32
SCN5A-213ENST00000491944 IPO8O15397 1037 aaKnown RBP29.52■■■□□ 2.32
SCN5A-213ENST00000491944 GTF2E1P29083 439 aaPredicted RBP29.52■■■□□ 2.32
SCN5A-213ENST00000491944 PRR5LQ6MZQ0 368 aa29.52■■■□□ 2.32
SCN5A-213ENST00000491944 TPTE2Q6XPS3 522 aa29.52■■■□□ 2.32
SCN5A-213ENST00000491944 API5Q9BZZ5 524 aaKnown RBP29.52■■■□□ 2.32
SCN5A-213ENST00000491944 IGKV5-2P06315 115 aa29.51■■■□□ 2.31
SCN5A-213ENST00000491944 TRIM28Q13263 835 aaKnown RBP29.51■■■□□ 2.31
SCN5A-213ENST00000491944 CCDC24Q8N4L8 307 aa29.51■■■□□ 2.31
SCN5A-213ENST00000491944 UTP14AQ9BVJ6 771 aaKnown RBP29.51■■■□□ 2.31
SCN5A-213ENST00000491944 IBTKQ9P2D0 1353 aaPredicted RBP29.5■■■□□ 2.31
SCN5A-213ENST00000491944 NTSR2O95665 410 aa29.5■■■□□ 2.31
SCN5A-213ENST00000491944 ST5P78524 1137 aa29.5■■■□□ 2.31
SCN5A-213ENST00000491944 CWF19L2Q2TBE0 894 aaKnown RBP29.5■■■□□ 2.31
SCN5A-213ENST00000491944 CCDC191Q8NCU4 936 aa29.5■■■□□ 2.31
SCN5A-213ENST00000491944 CWC25Q9NXE8 425 aaPredicted RBP29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms