RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 NECTIN2Q92692 538 aa11.69□□□□□ -0.54
COL6A4P1-203ENST00000491915 NIP7Q9Y221 180 aaKnown RBP eCLIP11.69□□□□□ -0.54
COL6A4P1-203ENST00000491915 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
COL6A4P1-203ENST00000491915 LMOD3Q0VAK6 560 aa11.68□□□□□ -0.54
COL6A4P1-203ENST00000491915 C9orf131Q5VYM1 1079 aa11.68□□□□□ -0.54
COL6A4P1-203ENST00000491915 ZNF622Q969S3 477 aaKnown RBP eCLIP11.68□□□□□ -0.54
COL6A4P1-203ENST00000491915 NRXN2Q9P2S2 1712 aa11.68□□□□□ -0.54
COL6A4P1-203ENST00000491915 ERVV-1B6SEH8 477 aa11.67□□□□□ -0.54
COL6A4P1-203ENST00000491915 PDE6BP35913 854 aa11.67□□□□□ -0.54
COL6A4P1-203ENST00000491915 C1QTNF8P60827 252 aa11.67□□□□□ -0.54
COL6A4P1-203ENST00000491915 NBPF5PQ86XG9 351 aaPredicted RBP11.67□□□□□ -0.54
COL6A4P1-203ENST00000491915 CNBD1Q8NA66 436 aa11.67□□□□□ -0.54
COL6A4P1-203ENST00000491915 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
COL6A4P1-203ENST00000491915 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
COL6A4P1-203ENST00000491915 ADCY9O60503 1353 aa11.67□□□□□ -0.54
COL6A4P1-203ENST00000491915 MAP3K15Q6ZN16 1313 aa11.66□□□□□ -0.54
COL6A4P1-203ENST00000491915 BRCA1P38398 1863 aaKnown RBP11.66□□□□□ -0.54
COL6A4P1-203ENST00000491915 ZNF853P0CG23 659 aa11.66□□□□□ -0.54
COL6A4P1-203ENST00000491915 TPTE2Q6XPS3 522 aa11.66□□□□□ -0.54
COL6A4P1-203ENST00000491915 ZBTB3Q9H5J0 574 aa11.66□□□□□ -0.54
COL6A4P1-203ENST00000491915 ZNF652Q9Y2D9 606 aa11.66□□□□□ -0.54
COL6A4P1-203ENST00000491915 GOLGB1Q14789 3259 aaKnown RBP11.66□□□□□ -0.54
COL6A4P1-203ENST00000491915 KLRG2A4D1S0 409 aaPredicted RBP11.65□□□□□ -0.54
COL6A4P1-203ENST00000491915 RGL2O15211 777 aa11.65□□□□□ -0.54
COL6A4P1-203ENST00000491915 SRGNP10124 158 aa11.65□□□□□ -0.54
COL6A4P1-203ENST00000491915 GPTP24298 496 aa11.65□□□□□ -0.54
COL6A4P1-203ENST00000491915 RASSF7Q02833 373 aa11.65□□□□□ -0.54
COL6A4P1-203ENST00000491915 SUSD4Q5VX71 490 aa11.65□□□□□ -0.54
COL6A4P1-203ENST00000491915 COPS6Q7L5N1 327 aa11.65□□□□□ -0.54
COL6A4P1-203ENST00000491915 ZNF34Q8IZ26 560 aa11.65□□□□□ -0.54
COL6A4P1-203ENST00000491915 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
COL6A4P1-203ENST00000491915 GPBP1L1Q9HC44 474 aaPredicted RBP11.65□□□□□ -0.54
COL6A4P1-203ENST00000491915 C21orf2O43822 256 aa11.64□□□□□ -0.55
COL6A4P1-203ENST00000491915 ST5P78524 1137 aa11.64□□□□□ -0.55
COL6A4P1-203ENST00000491915 NUTM1Q86Y26 1132 aa11.64□□□□□ -0.55
COL6A4P1-203ENST00000491915 MBIPQ9NS73 344 aa11.64□□□□□ -0.55
COL6A4P1-203ENST00000491915 PDZRN3Q9UPQ7 1066 aa11.64□□□□□ -0.55
COL6A4P1-203ENST00000491915 ANKRD31Q8N7Z5 1873 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 ERBB4Q15303 1308 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 NFKBIEO00221 500 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 KIF3CO14782 793 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 NPHP1O15259 732 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 AIMP1Q12904 312 aaKnown RBP11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 ERFEQ4G0M1 354 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 DUSP27Q5VZP5 1158 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 STYK1Q6J9G0 422 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 GIGYF2Q6Y7W6 1299 aaKnown RBP11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 KIF6Q6ZMV9 814 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 XAGE3Q8WTP9 111 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 C7orf43Q8WVR3 580 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 MASTLQ96GX5 879 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 RNF181Q9P0P0 153 aa11.63□□□□□ -0.55
COL6A4P1-203ENST00000491915 UBN2Q6ZU65 1347 aa11.62□□□□□ -0.55
COL6A4P1-203ENST00000491915 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
COL6A4P1-203ENST00000491915 ANP32CO43423 234 aa11.62□□□□□ -0.55
COL6A4P1-203ENST00000491915 OLFM4Q6UX06 510 aa11.62□□□□□ -0.55
COL6A4P1-203ENST00000491915 C8orf58Q8NAV2 365 aa11.62□□□□□ -0.55
COL6A4P1-203ENST00000491915 CNKSR1Q969H4 720 aa11.62□□□□□ -0.55
COL6A4P1-203ENST00000491915 NMRK2Q9NPI5 230 aa11.62□□□□□ -0.55
COL6A4P1-203ENST00000491915 DDX21Q9NR30 783 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL6A4P1-203ENST00000491915 ARFGEF1Q9Y6D6 1849 aa11.62□□□□□ -0.55
COL6A4P1-203ENST00000491915 SCN7AQ01118 1682 aa11.62□□□□□ -0.55
COL6A4P1-203ENST00000491915 GTF2E1P29083 439 aaPredicted RBP11.61□□□□□ -0.55
COL6A4P1-203ENST00000491915 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
COL6A4P1-203ENST00000491915 SYNE4Q8N205 404 aa11.61□□□□□ -0.55
COL6A4P1-203ENST00000491915 ZNF428Q96B54 188 aa11.61□□□□□ -0.55
COL6A4P1-203ENST00000491915 MRS2Q9HD23 443 aa11.61□□□□□ -0.55
COL6A4P1-203ENST00000491915 CHPF2Q9P2E5 772 aa11.61□□□□□ -0.55
COL6A4P1-203ENST00000491915 SLX4Q8IY92 1834 aa11.6□□□□□ -0.55
COL6A4P1-203ENST00000491915 SBF1O95248 1867 aa11.6□□□□□ -0.55
COL6A4P1-203ENST00000491915 BCORQ6W2J9 1755 aa11.6□□□□□ -0.55
COL6A4P1-203ENST00000491915 NPR1P16066 1061 aa11.6□□□□□ -0.55
COL6A4P1-203ENST00000491915 LMNB1P20700 586 aa11.6□□□□□ -0.55
COL6A4P1-203ENST00000491915 TCIRG1Q13488 830 aa11.6□□□□□ -0.55
COL6A4P1-203ENST00000491915 PRPF40BQ6NWY9 871 aaKnown RBP11.6□□□□□ -0.55
COL6A4P1-203ENST00000491915 TSPYL6Q8N831 410 aa11.6□□□□□ -0.55
COL6A4P1-203ENST00000491915 IFT57Q9NWB7 429 aa11.6□□□□□ -0.55
COL6A4P1-203ENST00000491915 NUP98P52948 1817 aa11.6□□□□□ -0.55
COL6A4P1-203ENST00000491915 NTSR2O95665 410 aa11.59□□□□□ -0.55
COL6A4P1-203ENST00000491915 GNAI1P63096 354 aa11.59□□□□□ -0.55
COL6A4P1-203ENST00000491915 SLC10A5Q5PT55 438 aa11.59□□□□□ -0.55
COL6A4P1-203ENST00000491915 HDGFL1Q5TGJ6 251 aa11.59□□□□□ -0.55
COL6A4P1-203ENST00000491915 SLC51AQ86UW1 340 aa11.59□□□□□ -0.55
COL6A4P1-203ENST00000491915 WWC1Q8IX03 1113 aa11.59□□□□□ -0.55
COL6A4P1-203ENST00000491915 NYXQ9GZU5 481 aa11.59□□□□□ -0.55
COL6A4P1-203ENST00000491915 RRAGCQ9HB90 399 aa11.59□□□□□ -0.55
COL6A4P1-203ENST00000491915 ABCC12Q96J65 1359 aa11.58□□□□□ -0.56
COL6A4P1-203ENST00000491915 HOXB7P09629 217 aa11.58□□□□□ -0.56
COL6A4P1-203ENST00000491915 CRY2Q49AN0 593 aa11.58□□□□□ -0.56
COL6A4P1-203ENST00000491915 ANKRD13DQ6ZTN6 518 aa11.58□□□□□ -0.56
COL6A4P1-203ENST00000491915 NLRP10Q86W26 655 aa11.58□□□□□ -0.56
COL6A4P1-203ENST00000491915 UTP14AQ9BVJ6 771 aaKnown RBP11.58□□□□□ -0.56
COL6A4P1-203ENST00000491915 SALL2Q9Y467 1007 aaPredicted RBP11.58□□□□□ -0.56
COL6A4P1-203ENST00000491915 LAMB4A4D0S4 1761 aa11.58□□□□□ -0.56
COL6A4P1-203ENST00000491915 HOXA10P31260 410 aaPredicted RBP11.57□□□□□ -0.56
COL6A4P1-203ENST00000491915 PARP10Q53GL7 1025 aa11.57□□□□□ -0.56
COL6A4P1-203ENST00000491915 PPP1R42Q7Z4L9 355 aa11.57□□□□□ -0.56
COL6A4P1-203ENST00000491915 TSR2Q969E8 191 aaKnown RBP11.57□□□□□ -0.56
COL6A4P1-203ENST00000491915 PHAXQ9H814 394 aaKnown RBP11.57□□□□□ -0.56
COL6A4P1-203ENST00000491915 DBF4Q9UBU7 674 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms