RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 EFSO43281 561 aa7.61□□□□□ -1.19
VTA1-204ENST00000491881 POM121CA8CG34 1229 aa7.6□□□□□ -1.19
VTA1-204ENST00000491881 TXLNAP40222 546 aa7.6□□□□□ -1.19
VTA1-204ENST00000491881 RSPO4Q2I0M5 234 aaPredicted RBP7.6□□□□□ -1.19
VTA1-204ENST00000491881 KRTAP9-2Q9BYQ4 174 aa7.6□□□□□ -1.19
VTA1-204ENST00000491881 NEUROD4Q9HD90 331 aa7.6□□□□□ -1.19
VTA1-204ENST00000491881 SOX11P35716 441 aa7.59□□□□□ -1.19
VTA1-204ENST00000491881 LRRC69Q6ZNQ3 347 aa7.59□□□□□ -1.19
VTA1-204ENST00000491881 GLMNQ92990 594 aa7.59□□□□□ -1.19
VTA1-204ENST00000491881 CALR3Q96L12 384 aaKnown RBP7.59□□□□□ -1.19
VTA1-204ENST00000491881 ARID3AQ99856 593 aa7.59□□□□□ -1.19
VTA1-204ENST00000491881 PCDHGA11Q9Y5H2 935 aa7.59□□□□□ -1.19
VTA1-204ENST00000491881 M0R082 166 aa7.58□□□□□ -1.2
VTA1-204ENST00000491881 SIN3BO75182 1162 aa7.58□□□□□ -1.2
VTA1-204ENST00000491881 PSME1Q06323 249 aa7.58□□□□□ -1.2
VTA1-204ENST00000491881 EML3Q32P44 896 aa7.58□□□□□ -1.2
VTA1-204ENST00000491881 ZNF417Q8TAU3 575 aa7.58□□□□□ -1.2
VTA1-204ENST00000491881 L3MBTL2Q969R5 705 aa7.58□□□□□ -1.2
VTA1-204ENST00000491881 CCDC97Q96F63 343 aaPredicted RBP7.58□□□□□ -1.2
VTA1-204ENST00000491881 ZNF587Q96SQ5 575 aaPredicted RBP7.58□□□□□ -1.2
VTA1-204ENST00000491881 C1orf115Q9H7X2 142 aa7.58□□□□□ -1.2
VTA1-204ENST00000491881 TPSG1Q9NRR2 321 aa7.58□□□□□ -1.2
VTA1-204ENST00000491881 SCHIP1Q9P0W5 487 aaPredicted RBP7.58□□□□□ -1.2
VTA1-204ENST00000491881 FAM229AH3BQW9 127 aa7.57□□□□□ -1.2
VTA1-204ENST00000491881 NKAPLQ5M9Q1 402 aa7.57□□□□□ -1.2
VTA1-204ENST00000491881 CCDC82Q8N4S0 544 aa7.57□□□□□ -1.2
VTA1-204ENST00000491881 ZDHHC1Q8WTX9 485 aa7.57□□□□□ -1.2
VTA1-204ENST00000491881 NOD1Q9Y239 953 aa7.57□□□□□ -1.2
VTA1-204ENST00000491881 KRTAP9-6A0A140TA67 174 aa7.56□□□□□ -1.2
VTA1-204ENST00000491881 ADARB2-AS1A8MUL3 147 aa7.56□□□□□ -1.2
VTA1-204ENST00000491881 NOS2P35228 1153 aa7.56□□□□□ -1.2
VTA1-204ENST00000491881 GTF2IP78347 998 aa7.56□□□□□ -1.2
VTA1-204ENST00000491881 TRIM28Q13263 835 aaKnown RBP7.56□□□□□ -1.2
VTA1-204ENST00000491881 HDGFL1Q5TGJ6 251 aa7.56□□□□□ -1.2
VTA1-204ENST00000491881 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.56□□□□□ -1.2
VTA1-204ENST00000491881 NACC1Q96RE7 527 aa7.56□□□□□ -1.2
VTA1-204ENST00000491881 MDFIQ99750 246 aa7.56□□□□□ -1.2
VTA1-204ENST00000491881 ZNF358Q9NW07 568 aa7.56□□□□□ -1.2
VTA1-204ENST00000491881 ZNF232Q9UNY5 417 aa7.56□□□□□ -1.2
VTA1-204ENST00000491881 PIK3CDO00329 1044 aa7.55□□□□□ -1.2
VTA1-204ENST00000491881 DYRK3O43781 588 aa7.55□□□□□ -1.2
VTA1-204ENST00000491881 SKIP12755 728 aa7.55□□□□□ -1.2
VTA1-204ENST00000491881 SFSWAPQ12872 951 aaKnown RBP7.55□□□□□ -1.2
VTA1-204ENST00000491881 NEUROD1Q13562 356 aa7.55□□□□□ -1.2
VTA1-204ENST00000491881 TEAD4Q15561 434 aa7.55□□□□□ -1.2
VTA1-204ENST00000491881 TNFRSF25Q93038 417 aa7.55□□□□□ -1.2
VTA1-204ENST00000491881 SLC30A3Q99726 388 aa7.55□□□□□ -1.2
VTA1-204ENST00000491881 SERPINA10Q9UK55 444 aa7.55□□□□□ -1.2
VTA1-204ENST00000491881 GPC6Q9Y625 555 aaPredicted RBP7.55□□□□□ -1.2
VTA1-204ENST00000491881 EML1O00423 815 aa7.54□□□□□ -1.2
VTA1-204ENST00000491881 C8orf86Q6ZUL3 223 aa7.54□□□□□ -1.2
VTA1-204ENST00000491881 PRDM6Q9NQX0 595 aa7.54□□□□□ -1.2
VTA1-204ENST00000491881 LZTS3O60299 673 aaPredicted RBP7.53□□□□□ -1.2
VTA1-204ENST00000491881 ALBP02768 609 aa7.53□□□□□ -1.2
VTA1-204ENST00000491881 ADH7P40394 386 aa7.53□□□□□ -1.2
VTA1-204ENST00000491881 SPEM2Q0P670 501 aa7.53□□□□□ -1.2
VTA1-204ENST00000491881 COL9A3Q14050 684 aaPredicted RBP7.53□□□□□ -1.2
VTA1-204ENST00000491881 GRIK4Q16099 956 aa7.53□□□□□ -1.2
VTA1-204ENST00000491881 FOXD4L6Q3SYB3 417 aaPredicted RBP7.53□□□□□ -1.2
VTA1-204ENST00000491881 TBCELQ5QJ74 424 aa7.53□□□□□ -1.2
VTA1-204ENST00000491881 FOXD4L3Q6VB84 417 aaPredicted RBP7.53□□□□□ -1.2
VTA1-204ENST00000491881 SLC9A9Q8IVB4 645 aa7.53□□□□□ -1.2
VTA1-204ENST00000491881 MICALL1Q8N3F8 863 aa7.53□□□□□ -1.2
VTA1-204ENST00000491881 RHPN1Q8TCX5 695 aa7.53□□□□□ -1.2
VTA1-204ENST00000491881 ADAMTS19Q8TE59 1207 aa7.53□□□□□ -1.2
VTA1-204ENST00000491881 ALG2Q9H553 416 aa7.53□□□□□ -1.2
VTA1-204ENST00000491881 STARD13Q9Y3M8 1113 aa7.53□□□□□ -1.2
VTA1-204ENST00000491881 SERTM1A2A2V5 107 aa7.52□□□□□ -1.21
VTA1-204ENST00000491881 RAB44Q7Z6P3 723 aaPredicted RBP7.52□□□□□ -1.21
VTA1-204ENST00000491881 ZFP64Q9NPA5 681 aa7.52□□□□□ -1.21
VTA1-204ENST00000491881 EPHA4P54764 986 aa7.51□□□□□ -1.21
VTA1-204ENST00000491881 NCOA4Q13772 614 aa7.51□□□□□ -1.21
VTA1-204ENST00000491881 PRSS36Q5K4E3 855 aa7.51□□□□□ -1.21
VTA1-204ENST00000491881 ARTNQ5T4W7 220 aa7.51□□□□□ -1.21
VTA1-204ENST00000491881 TNS4Q8IZW8 715 aa7.51□□□□□ -1.21
VTA1-204ENST00000491881 NID1P14543 1247 aa7.5□□□□□ -1.21
VTA1-204ENST00000491881 TRAPPC3LQ5T215 181 aa7.5□□□□□ -1.21
VTA1-204ENST00000491881 SH3PXD2AQ5TCZ1 1133 aa7.5□□□□□ -1.21
VTA1-204ENST00000491881 CEP63Q96MT8 703 aa7.5□□□□□ -1.21
VTA1-204ENST00000491881 BRD7Q9NPI1 651 aa7.5□□□□□ -1.21
VTA1-204ENST00000491881 C9orf172C9J069 976 aa7.49□□□□□ -1.21
VTA1-204ENST00000491881 NBPF11Q86T75 865 aa7.49□□□□□ -1.21
VTA1-204ENST00000491881 C7orf43Q8WVR3 580 aa7.49□□□□□ -1.21
VTA1-204ENST00000491881 CHMP3Q9Y3E7 222 aa7.49□□□□□ -1.21
VTA1-204ENST00000491881 LILRB5O75023 590 aa7.48□□□□□ -1.21
VTA1-204ENST00000491881 DEPDC4Q8N2C3 294 aa7.48□□□□□ -1.21
VTA1-204ENST00000491881 NFATC2IPQ8NCF5 419 aa7.48□□□□□ -1.21
VTA1-204ENST00000491881 ANKIB1Q9P2G1 1089 aa7.48□□□□□ -1.21
VTA1-204ENST00000491881 KCNH4Q9UQ05 1017 aa7.48□□□□□ -1.21
VTA1-204ENST00000491881 SFI1A8K8P3 1242 aa7.47□□□□□ -1.21
VTA1-204ENST00000491881 TBC1D8BQ0IIM8 1120 aa7.47□□□□□ -1.21
VTA1-204ENST00000491881 C1orf53Q5VUE5 145 aa7.47□□□□□ -1.21
VTA1-204ENST00000491881 C20orf204Q6ZNR8 217 aa7.47□□□□□ -1.21
VTA1-204ENST00000491881 TRIM50Q86XT4 487 aa7.47□□□□□ -1.21
VTA1-204ENST00000491881 HSH2DQ96JZ2 352 aa7.47□□□□□ -1.21
VTA1-204ENST00000491881 USP17L5A8MUK1 530 aa7.46□□□□□ -1.22
VTA1-204ENST00000491881 PSMA6P60900 246 aaKnown RBP7.46□□□□□ -1.22
VTA1-204ENST00000491881 ADGRE1Q14246 886 aa7.46□□□□□ -1.22
VTA1-204ENST00000491881 BHMTQ93088 406 aa7.46□□□□□ -1.22
VTA1-204ENST00000491881 UCN2Q96RP3 112 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms