RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 CCDC24Q8N4L8 307 aa19.7■□□□□ 0.74
CDC42SE1-205ENST00000491825 NBPF15Q8N660 670 aa19.7■□□□□ 0.74
CDC42SE1-205ENST00000491825 RBM46Q8TBY0 533 aaKnown RBP19.7■□□□□ 0.74
CDC42SE1-205ENST00000491825 PDZRN3Q9UPQ7 1066 aa19.7■□□□□ 0.74
CDC42SE1-205ENST00000491825 KDM2BQ8NHM5 1336 aa19.7■□□□□ 0.74
CDC42SE1-205ENST00000491825 SBF1O95248 1867 aa19.69■□□□□ 0.74
CDC42SE1-205ENST00000491825 PDE6BP35913 854 aa19.69■□□□□ 0.74
CDC42SE1-205ENST00000491825 LMOD3Q0VAK6 560 aa19.69■□□□□ 0.74
CDC42SE1-205ENST00000491825 SETDB2Q96T68 719 aa19.69■□□□□ 0.74
CDC42SE1-205ENST00000491825 TAF7Q15545 349 aaPredicted RBP19.68■□□□□ 0.74
CDC42SE1-205ENST00000491825 CLEC4GQ6UXB4 293 aa19.68■□□□□ 0.74
CDC42SE1-205ENST00000491825 NPM2Q86SE8 214 aaKnown RBP19.68■□□□□ 0.74
CDC42SE1-205ENST00000491825 FAM9BQ8IZU0 186 aa19.68■□□□□ 0.74
CDC42SE1-205ENST00000491825 CNBD1Q8NA66 436 aa19.68■□□□□ 0.74
CDC42SE1-205ENST00000491825 RGL2O15211 777 aa19.67■□□□□ 0.74
CDC42SE1-205ENST00000491825 APLP1P51693 650 aa19.67■□□□□ 0.74
CDC42SE1-205ENST00000491825 RIPK4P57078 832 aa19.67■□□□□ 0.74
CDC42SE1-205ENST00000491825 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
CDC42SE1-205ENST00000491825 TNRC6CQ9HCJ0 1690 aaKnown RBP19.66■□□□□ 0.74
CDC42SE1-205ENST00000491825 APAF1O14727 1248 aa19.66■□□□□ 0.74
CDC42SE1-205ENST00000491825 ZNF622Q969S3 477 aaKnown RBP eCLIP19.66■□□□□ 0.74
CDC42SE1-205ENST00000491825 MIS18AQ9NYP9 233 aa19.66■□□□□ 0.74
CDC42SE1-205ENST00000491825 SRGNP10124 158 aa19.65■□□□□ 0.74
CDC42SE1-205ENST00000491825 RRAGCQ9HB90 399 aa19.65■□□□□ 0.74
CDC42SE1-205ENST00000491825 ST5P78524 1137 aa19.64■□□□□ 0.73
CDC42SE1-205ENST00000491825 RRP7AQ9Y3A4 280 aaKnown RBP19.64■□□□□ 0.73
CDC42SE1-205ENST00000491825 KDM3BQ7LBC6 1761 aa19.64■□□□□ 0.73
CDC42SE1-205ENST00000491825 TIAM2Q8IVF5 1701 aa19.63■□□□□ 0.73
CDC42SE1-205ENST00000491825 GLTPD2A6NH11 291 aa19.63■□□□□ 0.73
CDC42SE1-205ENST00000491825 C21orf2O43822 256 aa19.63■□□□□ 0.73
CDC42SE1-205ENST00000491825 FSTL1Q12841 308 aa19.63■□□□□ 0.73
CDC42SE1-205ENST00000491825 STYK1Q6J9G0 422 aa19.63■□□□□ 0.73
CDC42SE1-205ENST00000491825 DNAJC5GQ8N7S2 189 aa19.63■□□□□ 0.73
CDC42SE1-205ENST00000491825 TRIM35Q9UPQ4 493 aa19.63■□□□□ 0.73
CDC42SE1-205ENST00000491825 ZNF652Q9Y2D9 606 aa19.63■□□□□ 0.73
CDC42SE1-205ENST00000491825 LAMB4A4D0S4 1761 aa19.62■□□□□ 0.73
CDC42SE1-205ENST00000491825 LTBP3Q9NS15 1303 aa19.62■□□□□ 0.73
CDC42SE1-205ENST00000491825 CCDC27Q2M243 656 aa19.62■□□□□ 0.73
CDC42SE1-205ENST00000491825 C16orf71Q8IYS4 520 aaPredicted RBP19.62■□□□□ 0.73
CDC42SE1-205ENST00000491825 KLRG2A4D1S0 409 aaPredicted RBP19.61■□□□□ 0.73
CDC42SE1-205ENST00000491825 EIF4A1P60842 406 aaKnown RBP19.61■□□□□ 0.73
CDC42SE1-205ENST00000491825 PRPF40BQ6NWY9 871 aaKnown RBP19.61■□□□□ 0.73
CDC42SE1-205ENST00000491825 NBPF5PQ86XG9 351 aaPredicted RBP19.61■□□□□ 0.73
CDC42SE1-205ENST00000491825 NGEFQ8N5V2 710 aa19.61■□□□□ 0.73
CDC42SE1-205ENST00000491825 CNKSR1Q969H4 720 aa19.61■□□□□ 0.73
CDC42SE1-205ENST00000491825 MASTLQ96GX5 879 aa19.61■□□□□ 0.73
CDC42SE1-205ENST00000491825 THUMPD2Q9BTF0 503 aaKnown RBP19.61■□□□□ 0.73
CDC42SE1-205ENST00000491825 NPHP1O15259 732 aa19.6■□□□□ 0.73
CDC42SE1-205ENST00000491825 NEUROD2Q15784 382 aa19.6■□□□□ 0.73
CDC42SE1-205ENST00000491825 HLFQ16534 295 aa19.6■□□□□ 0.73
CDC42SE1-205ENST00000491825 ZNF219Q9P2Y4 722 aaPredicted RBP19.6■□□□□ 0.73
CDC42SE1-205ENST00000491825 FER1L6Q2WGJ9 1857 aa19.6■□□□□ 0.73
CDC42SE1-205ENST00000491825 C7orf43Q8WVR3 580 aa19.59■□□□□ 0.73
CDC42SE1-205ENST00000491825 TAOK3Q9H2K8 898 aa19.59■□□□□ 0.73
CDC42SE1-205ENST00000491825 NIP7Q9Y221 180 aaKnown RBP eCLIP19.59■□□□□ 0.73
CDC42SE1-205ENST00000491825 ARFGEF2Q9Y6D5 1785 aa19.58■□□□□ 0.73
CDC42SE1-205ENST00000491825 POTECB2RU33 542 aa19.58■□□□□ 0.72
CDC42SE1-205ENST00000491825 WDR90Q96KV7 1748 aa19.58■□□□□ 0.72
CDC42SE1-205ENST00000491825 SLX4Q8IY92 1834 aa19.58■□□□□ 0.72
CDC42SE1-205ENST00000491825 VEGFAP15692 232 aaPredicted RBP19.57■□□□□ 0.72
CDC42SE1-205ENST00000491825 TPTE2Q6XPS3 522 aa19.57■□□□□ 0.72
CDC42SE1-205ENST00000491825 SMC1BQ8NDV3 1235 aa19.57■□□□□ 0.72
CDC42SE1-205ENST00000491825 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
CDC42SE1-205ENST00000491825 HTRA3P83110 453 aa19.56■□□□□ 0.72
CDC42SE1-205ENST00000491825 CALD1Q05682 793 aaKnown RBP19.56■□□□□ 0.72
CDC42SE1-205ENST00000491825 ERFEQ4G0M1 354 aa19.56■□□□□ 0.72
CDC42SE1-205ENST00000491825 SOGA3Q5TF21 947 aa19.56■□□□□ 0.72
CDC42SE1-205ENST00000491825 ERVV-1B6SEH8 477 aa19.55■□□□□ 0.72
CDC42SE1-205ENST00000491825 NPR1P16066 1061 aa19.55■□□□□ 0.72
CDC42SE1-205ENST00000491825 ABCC12Q96J65 1359 aa19.55■□□□□ 0.72
CDC42SE1-205ENST00000491825 MAP3K15Q6ZN16 1313 aa19.54■□□□□ 0.72
CDC42SE1-205ENST00000491825 TTLL7Q6ZT98 887 aa19.54■□□□□ 0.72
CDC42SE1-205ENST00000491825 WWC1Q8IX03 1113 aa19.54■□□□□ 0.72
CDC42SE1-205ENST00000491825 DPY19L2Q6NUT2 758 aa19.53■□□□□ 0.72
CDC42SE1-205ENST00000491825 LRP10Q7Z4F1 713 aa19.53■□□□□ 0.72
CDC42SE1-205ENST00000491825 IBTKQ9P2D0 1353 aaPredicted RBP19.53■□□□□ 0.72
CDC42SE1-205ENST00000491825 SNED1Q8TER0 1413 aa19.52■□□□□ 0.72
CDC42SE1-205ENST00000491825 FAM177BA6PVY3 158 aa19.52■□□□□ 0.72
CDC42SE1-205ENST00000491825 CRY2Q49AN0 593 aa19.52■□□□□ 0.72
CDC42SE1-205ENST00000491825 CCDC93Q567U6 631 aa19.52■□□□□ 0.72
CDC42SE1-205ENST00000491825 KLRG1Q96E93 195 aa19.52■□□□□ 0.72
CDC42SE1-205ENST00000491825 IL16Q14005 1332 aa19.51■□□□□ 0.71
CDC42SE1-205ENST00000491825 ERBB4Q15303 1308 aa19.51■□□□□ 0.71
CDC42SE1-205ENST00000491825 UBN2Q6ZU65 1347 aa19.51■□□□□ 0.71
CDC42SE1-205ENST00000491825 ZNF521Q96K83 1311 aa19.51■□□□□ 0.71
CDC42SE1-205ENST00000491825 RIC1Q4ADV7 1423 aa19.51■□□□□ 0.71
CDC42SE1-205ENST00000491825 DICER1Q9UPY3 1922 aaKnown RBP19.51■□□□□ 0.71
CDC42SE1-205ENST00000491825 IFFO2Q5TF58 517 aa19.51■□□□□ 0.71
CDC42SE1-205ENST00000491825 OLFM4Q6UX06 510 aa19.51■□□□□ 0.71
CDC42SE1-205ENST00000491825 CFAP44Q96MT7 982 aa19.51■□□□□ 0.71
CDC42SE1-205ENST00000491825 IFT57Q9NWB7 429 aa19.51■□□□□ 0.71
CDC42SE1-205ENST00000491825 CCDC88AQ3V6T2 1871 aa19.51■□□□□ 0.71
CDC42SE1-205ENST00000491825 CHL1O00533 1208 aa19.5■□□□□ 0.71
CDC42SE1-205ENST00000491825 ZNF853P0CG23 659 aa19.5■□□□□ 0.71
CDC42SE1-205ENST00000491825 MYL6BP14649 208 aa19.5■□□□□ 0.71
CDC42SE1-205ENST00000491825 KIF6Q6ZMV9 814 aa19.5■□□□□ 0.71
CDC42SE1-205ENST00000491825 JMYQ8N9B5 988 aa19.5■□□□□ 0.71
CDC42SE1-205ENST00000491825 TSPYL4Q9UJ04 414 aa19.5■□□□□ 0.71
CDC42SE1-205ENST00000491825 CACNA1SQ13698 1873 aa19.5■□□□□ 0.71
CDC42SE1-205ENST00000491825 PCNTO95613 3336 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms