RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 DDX58O95786 925 aaKnown RBP27.62■■■□□ 2.01
VCPKMT-204ENST00000491402 R3HDM1Q15032 1099 aaKnown RBP27.62■■■□□ 2.01
VCPKMT-204ENST00000491402 PI4KAP1Q8N8J0 262 aa27.62■■■□□ 2.01
VCPKMT-204ENST00000491402 N4BP2Q86UW6 1770 aaPredicted RBP27.61■■■□□ 2.01
VCPKMT-204ENST00000491402 ARFGEF2Q9Y6D5 1785 aa27.61■■■□□ 2.01
VCPKMT-204ENST00000491402 RPS6KA4O75676 772 aa27.6■■■□□ 2.01
VCPKMT-204ENST00000491402 EIF5P55010 431 aaKnown RBP27.6■■■□□ 2.01
VCPKMT-204ENST00000491402 KSR2Q6VAB6 950 aa27.6■■■□□ 2.01
VCPKMT-204ENST00000491402 RTCBQ9Y3I0 505 aaKnown RBP27.6■■■□□ 2.01
VCPKMT-204ENST00000491402 PSDA5PKW4 1024 aaPredicted RBP27.6■■■□□ 2.01
VCPKMT-204ENST00000491402 PHF14O94880 888 aa27.6■■■□□ 2.01
VCPKMT-204ENST00000491402 TTLL7Q6ZT98 887 aa27.6■■■□□ 2.01
VCPKMT-204ENST00000491402 PXDNLA1KZ92 1463 aa27.59■■■□□ 2.01
VCPKMT-204ENST00000491402 ANKRD13DQ6ZTN6 518 aa27.59■■■□□ 2.01
VCPKMT-204ENST00000491402 TMEM57Q8N5G2 664 aa27.59■■■□□ 2.01
VCPKMT-204ENST00000491402 NPM2Q86SE8 214 aaKnown RBP27.58■■■□□ 2.01
VCPKMT-204ENST00000491402 MAP3K2Q9Y2U5 619 aa27.58■■■□□ 2.01
VCPKMT-204ENST00000491402 COG6Q9Y2V7 657 aa27.58■■■□□ 2.01
VCPKMT-204ENST00000491402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.58■■■□□ 2
VCPKMT-204ENST00000491402 FKBP8Q14318 412 aa27.58■■■□□ 2
VCPKMT-204ENST00000491402 SLC4A10Q6U841 1118 aa27.58■■■□□ 2
VCPKMT-204ENST00000491402 DNAAF4Q8WXU2 420 aa27.58■■■□□ 2
VCPKMT-204ENST00000491402 COL15A1P39059 1388 aa27.58■■■□□ 2
VCPKMT-204ENST00000491402 UBR3Q6ZT12 1888 aa27.57■■■□□ 2
VCPKMT-204ENST00000491402 RIC3Q7Z5B4 369 aa27.57■■■□□ 2
VCPKMT-204ENST00000491402 PLBD2Q8NHP8 589 aa27.57■■■□□ 2
VCPKMT-204ENST00000491402 CRBNQ96SW2 442 aa27.57■■■□□ 2
VCPKMT-204ENST00000491402 PNPLA7Q6ZV29 1317 aa27.57■■■□□ 2
VCPKMT-204ENST00000491402 TUBGCP6Q96RT7 1819 aa27.56■■■□□ 2
VCPKMT-204ENST00000491402 MVPQ14764 893 aaKnown RBP27.55■■■□□ 2
VCPKMT-204ENST00000491402 TRAPPC3LQ5T215 181 aa27.55■■■□□ 2
VCPKMT-204ENST00000491402 KIF6Q6ZMV9 814 aa27.55■■■□□ 2
VCPKMT-204ENST00000491402 ITPRIPQ8IWB1 547 aa27.55■■■□□ 2
VCPKMT-204ENST00000491402 PDGFDQ9GZP0 370 aaPredicted RBP27.55■■■□□ 2
VCPKMT-204ENST00000491402 SSFA2P28290 1259 aa27.55■■■□□ 2
VCPKMT-204ENST00000491402 INTS3Q68E01 1043 aaKnown RBP27.55■■■□□ 2
VCPKMT-204ENST00000491402 COL23A1Q86Y22 540 aaPredicted RBP27.55■■■□□ 2
VCPKMT-204ENST00000491402 MSH5O43196 834 aa27.54■■■□□ 2
VCPKMT-204ENST00000491402 DZIP3Q86Y13 1208 aaKnown RBP27.54■■■□□ 2
VCPKMT-204ENST00000491402 ARXQ96QS3 562 aa27.54■■■□□ 2
VCPKMT-204ENST00000491402 ZBTB3Q9H5J0 574 aa27.54■■■□□ 2
VCPKMT-204ENST00000491402 ARHGEF1Q92888 912 aaKnown RBP27.53■■■□□ 2
VCPKMT-204ENST00000491402 MAP3K15Q6ZN16 1313 aa27.53■■■□□ 2
VCPKMT-204ENST00000491402 CCT4P50991 539 aaKnown RBP27.53■■■□□ 2
VCPKMT-204ENST00000491402 FLAD1Q8NFF5 587 aa27.53■■■□□ 2
VCPKMT-204ENST00000491402 TBC1D2BQ9UPU7 963 aa27.53■■■□□ 2
VCPKMT-204ENST00000491402 ATP10DQ9P241 1426 aa27.52■■■□□ 2
VCPKMT-204ENST00000491402 EXOC6Q8TAG9 804 aa27.52■■■□□ 2
VCPKMT-204ENST00000491402 C4AP0C0L4 1744 aa27.52■■■□□ 2
VCPKMT-204ENST00000491402 BCORQ6W2J9 1755 aa27.52■■■□□ 2
VCPKMT-204ENST00000491402 METTL22Q9BUU2 404 aaPredicted RBP27.51■■□□□ 1.99
VCPKMT-204ENST00000491402 NUP98P52948 1817 aa27.51■■□□□ 1.99
VCPKMT-204ENST00000491402 ADRA2BP18089 450 aa27.5■■□□□ 1.99
VCPKMT-204ENST00000491402 BEND3Q5T5X7 828 aa27.5■■□□□ 1.99
VCPKMT-204ENST00000491402 A0A087WZG4 1122 aa27.5■■□□□ 1.99
VCPKMT-204ENST00000491402 RFC4P35249 363 aa27.5■■□□□ 1.99
VCPKMT-204ENST00000491402 DDX19BQ9UMR2 479 aa27.5■■□□□ 1.99
VCPKMT-204ENST00000491402 SCN7AQ01118 1682 aa27.49■■□□□ 1.99
VCPKMT-204ENST00000491402 AFDNP55196 1824 aaKnown RBP27.49■■□□□ 1.99
VCPKMT-204ENST00000491402 ERVV-1B6SEH8 477 aa27.48■■□□□ 1.99
VCPKMT-204ENST00000491402 NEXNQ0ZGT2 675 aa27.48■■□□□ 1.99
VCPKMT-204ENST00000491402 SRCIN1Q9C0H9 1055 aa27.48■■□□□ 1.99
VCPKMT-204ENST00000491402 GTF3C3Q9Y5Q9 886 aa27.48■■□□□ 1.99
VCPKMT-204ENST00000491402 QSER1Q2KHR3 1735 aa27.48■■□□□ 1.99
VCPKMT-204ENST00000491402 ANKRD36CQ5JPF3 1778 aa27.48■■□□□ 1.99
VCPKMT-204ENST00000491402 MYD88Q99836 296 aa27.48■■□□□ 1.99
VCPKMT-204ENST00000491402 CAMTA2O94983 1202 aa27.47■■□□□ 1.99
VCPKMT-204ENST00000491402 LINS1Q8NG48 757 aa27.47■■□□□ 1.99
VCPKMT-204ENST00000491402 HLFQ16534 295 aa27.46■■□□□ 1.99
VCPKMT-204ENST00000491402 GIGYF2Q6Y7W6 1299 aaKnown RBP27.46■■□□□ 1.99
VCPKMT-204ENST00000491402 SRP68Q9UHB9 627 aaKnown RBP27.46■■□□□ 1.99
VCPKMT-204ENST00000491402 IGKV5-2P06315 115 aa27.45■■□□□ 1.99
VCPKMT-204ENST00000491402 CWF19L2Q2TBE0 894 aaKnown RBP27.45■■□□□ 1.99
VCPKMT-204ENST00000491402 ZPR1O75312 459 aa27.44■■□□□ 1.98
VCPKMT-204ENST00000491402 NARFQ9UHQ1 456 aa27.44■■□□□ 1.98
VCPKMT-204ENST00000491402 NEURL1BA8MQ27 555 aa27.43■■□□□ 1.98
VCPKMT-204ENST00000491402 ZBTB7BO15156 539 aaPredicted RBP27.43■■□□□ 1.98
VCPKMT-204ENST00000491402 ALDH1L1O75891 902 aa27.43■■□□□ 1.98
VCPKMT-204ENST00000491402 ERICH6BQ5W0A0 696 aa27.43■■□□□ 1.98
VCPKMT-204ENST00000491402 ATP5J2-PTCD1G3V325 749 aa27.43■■□□□ 1.98
VCPKMT-204ENST00000491402 TCIRG1Q13488 830 aa27.43■■□□□ 1.98
VCPKMT-204ENST00000491402 USPL1Q5W0Q7 1092 aa27.43■■□□□ 1.98
VCPKMT-204ENST00000491402 ZBTB7AO95365 584 aa27.42■■□□□ 1.98
VCPKMT-204ENST00000491402 HSP90AB3PQ58FF7 597 aa27.42■■□□□ 1.98
VCPKMT-204ENST00000491402 USP42Q9H9J4 1324 aaKnown RBP27.41■■□□□ 1.98
VCPKMT-204ENST00000491402 MEIS3Q99687 375 aa27.4■■□□□ 1.98
VCPKMT-204ENST00000491402 CHMP4BQ9H444 224 aaKnown RBP27.4■■□□□ 1.98
VCPKMT-204ENST00000491402 ZNF652Q9Y2D9 606 aa27.4■■□□□ 1.98
VCPKMT-204ENST00000491402 IBTKQ9P2D0 1353 aaPredicted RBP27.4■■□□□ 1.98
VCPKMT-204ENST00000491402 CASZ1Q86V15 1759 aa27.4■■□□□ 1.98
VCPKMT-204ENST00000491402 RGL2O15211 777 aa27.4■■□□□ 1.98
VCPKMT-204ENST00000491402 CLEC4GQ6UXB4 293 aa27.4■■□□□ 1.98
VCPKMT-204ENST00000491402 SLC16A10Q8TF71 515 aa27.4■■□□□ 1.98
VCPKMT-204ENST00000491402 ISCA1Q9BUE6 129 aa27.4■■□□□ 1.98
VCPKMT-204ENST00000491402 ZBTB40Q9NUA8 1239 aa27.4■■□□□ 1.98
VCPKMT-204ENST00000491402 GYS1P13807 737 aa27.39■■□□□ 1.98
VCPKMT-204ENST00000491402 MSL1Q68DK7 614 aa27.39■■□□□ 1.98
VCPKMT-204ENST00000491402 USP44Q9H0E7 712 aa27.39■■□□□ 1.98
VCPKMT-204ENST00000491402 AAMPQ13685 434 aa27.38■■□□□ 1.97
VCPKMT-204ENST00000491402 ATF5Q9Y2D1 282 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms