RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 CC2D1BQ5T0F9 858 aaKnown RBP15.06■□□□□ 0
NCSTN-214ENST00000491390 MAP1SQ66K74 1059 aaPredicted RBP15.06■□□□□ 0
NCSTN-214ENST00000491390 PRR5LQ6MZQ0 368 aa15.06■□□□□ 0
NCSTN-214ENST00000491390 C7orf43Q8WVR3 580 aa15.06■□□□□ 0
NCSTN-214ENST00000491390 ZNF622Q969S3 477 aaKnown RBP eCLIP15.06■□□□□ 0
NCSTN-214ENST00000491390 CAPNS2Q96L46 248 aa15.06■□□□□ 0
NCSTN-214ENST00000491390 HACL1Q9UJ83 578 aa15.06■□□□□ 0
NCSTN-214ENST00000491390 EPHX2P34913 555 aa15.05■□□□□ -0
NCSTN-214ENST00000491390 MTHFSDQ2M296 383 aaKnown RBP15.05■□□□□ -0
NCSTN-214ENST00000491390 EAPPQ56P03 285 aaPredicted RBP15.05■□□□□ -0
NCSTN-214ENST00000491390 SOGA3Q5TF21 947 aa15.05■□□□□ -0
NCSTN-214ENST00000491390 PRPF40BQ6NWY9 871 aaKnown RBP15.05■□□□□ -0
NCSTN-214ENST00000491390 PNMA8AQ86V59 439 aaPredicted RBP15.05■□□□□ -0
NCSTN-214ENST00000491390 DDX21Q9NR30 783 aaKnown RBP eCLIP15.05■□□□□ -0
NCSTN-214ENST00000491390 KIF7Q2M1P5 1343 aa15.05■□□□□ -0
NCSTN-214ENST00000491390 STYK1Q6J9G0 422 aa15.04■□□□□ -0
NCSTN-214ENST00000491390 ABT1Q9ULW3 272 aaKnown RBP15.04■□□□□ -0
NCSTN-214ENST00000491390 SRGNP10124 158 aa15.03■□□□□ -0
NCSTN-214ENST00000491390 TBC1D9BQ66K14 1250 aa15.03■□□□□ -0
NCSTN-214ENST00000491390 CNKSR1Q969H4 720 aa15.03■□□□□ -0
NCSTN-214ENST00000491390 GPR101Q96P66 508 aaPredicted RBP15.03■□□□□ -0
NCSTN-214ENST00000491390 CANXP27824 592 aaKnown RBP15.02■□□□□ -0
NCSTN-214ENST00000491390 ECE1P42892 770 aa15.02■□□□□ -0
NCSTN-214ENST00000491390 EIF5P55010 431 aaKnown RBP15.02■□□□□ -0
NCSTN-214ENST00000491390 BICDL1Q6ZP65 573 aa15.02■□□□□ -0
NCSTN-214ENST00000491390 BEGAINQ9BUH8 593 aa15.02■□□□□ -0
NCSTN-214ENST00000491390 TSKSQ9UJT2 592 aa15.02■□□□□ -0
NCSTN-214ENST00000491390 CLEC11AQ9Y240 323 aa15.02■□□□□ -0
NCSTN-214ENST00000491390 UBR2Q8IWV8 1755 aa15.02□□□□□ -0.01
NCSTN-214ENST00000491390 RNF123Q5XPI4 1314 aa15.01□□□□□ -0.01
NCSTN-214ENST00000491390 CA12O43570 354 aa15.01□□□□□ -0.01
NCSTN-214ENST00000491390 MAP2K2P36507 400 aa15.01□□□□□ -0.01
NCSTN-214ENST00000491390 CYP4F22Q6NT55 531 aa15.01□□□□□ -0.01
NCSTN-214ENST00000491390 VSIG10Q8N0Z9 540 aa15.01□□□□□ -0.01
NCSTN-214ENST00000491390 SNED1Q8TER0 1413 aa15□□□□□ -0.01
NCSTN-214ENST00000491390 CACNA1SQ13698 1873 aa15□□□□□ -0.01
NCSTN-214ENST00000491390 FZD9O00144 591 aa15□□□□□ -0.01
NCSTN-214ENST00000491390 DIAPH1O60610 1272 aaKnown RBP15□□□□□ -0.01
NCSTN-214ENST00000491390 CST9Q5W186 159 aa15□□□□□ -0.01
NCSTN-214ENST00000491390 CCDC24Q8N4L8 307 aa15□□□□□ -0.01
NCSTN-214ENST00000491390 PER1O15534 1290 aaPredicted RBP14.99□□□□□ -0.01
NCSTN-214ENST00000491390 FKBP4Q02790 459 aaKnown RBP eCLIP14.99□□□□□ -0.01
NCSTN-214ENST00000491390 FMR1Q06787 632 aaKnown RBP eCLIP14.99□□□□□ -0.01
NCSTN-214ENST00000491390 PRPF38BQ5VTL8 546 aaKnown RBP14.99□□□□□ -0.01
NCSTN-214ENST00000491390 GPC2Q8N158 579 aa14.99□□□□□ -0.01
NCSTN-214ENST00000491390 ZNF330Q9Y3S2 320 aaPredicted RBP14.99□□□□□ -0.01
NCSTN-214ENST00000491390 TLL2Q9Y6L7 1015 aa14.99□□□□□ -0.01
NCSTN-214ENST00000491390 BCORQ6W2J9 1755 aa14.98□□□□□ -0.01
NCSTN-214ENST00000491390 U2SURPO15042 1029 aaKnown RBP14.98□□□□□ -0.01
NCSTN-214ENST00000491390 CCDC93Q567U6 631 aa14.98□□□□□ -0.01
NCSTN-214ENST00000491390 MASTLQ96GX5 879 aa14.98□□□□□ -0.01
NCSTN-214ENST00000491390 CFAP44Q96MT7 982 aa14.98□□□□□ -0.01
NCSTN-214ENST00000491390 A0A087WZG4 1122 aa14.97□□□□□ -0.01
NCSTN-214ENST00000491390 AOC2O75106 756 aa14.97□□□□□ -0.01
NCSTN-214ENST00000491390 ZNF496Q96IT1 587 aaPredicted RBP14.97□□□□□ -0.01
NCSTN-214ENST00000491390 ZNF277Q9NRM2 450 aaPredicted RBP14.97□□□□□ -0.01
NCSTN-214ENST00000491390 COL4A5P29400 1685 aa14.97□□□□□ -0.01
NCSTN-214ENST00000491390 KLRG2A4D1S0 409 aaPredicted RBP14.96□□□□□ -0.01
NCSTN-214ENST00000491390 BRPF1P55201 1214 aaPredicted RBP14.96□□□□□ -0.01
NCSTN-214ENST00000491390 DGKZQ13574 1117 aa14.96□□□□□ -0.01
NCSTN-214ENST00000491390 TTC5Q8N0Z6 440 aa14.96□□□□□ -0.01
NCSTN-214ENST00000491390 CNBD1Q8NA66 436 aa14.96□□□□□ -0.01
NCSTN-214ENST00000491390 IL17REQ8NFR9 667 aa14.96□□□□□ -0.01
NCSTN-214ENST00000491390 TRPM7Q96QT4 1865 aa14.96□□□□□ -0.01
NCSTN-214ENST00000491390 TBC1D2BQ9UPU7 963 aa14.96□□□□□ -0.01
NCSTN-214ENST00000491390 CASP8AP2Q9UKL3 1982 aa14.96□□□□□ -0.01
NCSTN-214ENST00000491390 COL3A1P02461 1466 aaPredicted RBP14.95□□□□□ -0.02
NCSTN-214ENST00000491390 KCNQ3O43525 872 aa14.95□□□□□ -0.02
NCSTN-214ENST00000491390 HHIPL1Q96JK4 782 aa14.95□□□□□ -0.02
NCSTN-214ENST00000491390 TRAF5O00463 557 aa14.94□□□□□ -0.02
NCSTN-214ENST00000491390 PIP4K2AP48426 406 aaPredicted RBP14.94□□□□□ -0.02
NCSTN-214ENST00000491390 SAPCD2Q86UD0 394 aa14.94□□□□□ -0.02
NCSTN-214ENST00000491390 STARD3NLO95772 234 aa14.93□□□□□ -0.02
NCSTN-214ENST00000491390 A1BGP04217 495 aa14.93□□□□□ -0.02
NCSTN-214ENST00000491390 IARSP41252 1262 aaKnown RBP14.93□□□□□ -0.02
NCSTN-214ENST00000491390 SCNN1DP51172 638 aa14.93□□□□□ -0.02
NCSTN-214ENST00000491390 TEFQ10587 303 aa14.93□□□□□ -0.02
NCSTN-214ENST00000491390 GRM1Q13255 1194 aa14.93□□□□□ -0.02
NCSTN-214ENST00000491390 ZNF790Q6PG37 636 aa14.93□□□□□ -0.02
NCSTN-214ENST00000491390 OLFM4Q6UX06 510 aa14.93□□□□□ -0.02
NCSTN-214ENST00000491390 PAXIP1Q6ZW49 1069 aaPredicted RBP14.93□□□□□ -0.02
NCSTN-214ENST00000491390 GNAT3A8MTJ3 354 aa14.92□□□□□ -0.02
NCSTN-214ENST00000491390 CAMTA2O94983 1202 aa14.92□□□□□ -0.02
NCSTN-214ENST00000491390 NPR1P16066 1061 aa14.92□□□□□ -0.02
NCSTN-214ENST00000491390 ST5P78524 1137 aa14.92□□□□□ -0.02
NCSTN-214ENST00000491390 RTKN2Q8IZC4 609 aa14.92□□□□□ -0.02
NCSTN-214ENST00000491390 PHACTR3Q96KR7 559 aa14.92□□□□□ -0.02
NCSTN-214ENST00000491390 HEG1Q9ULI3 1381 aa14.92□□□□□ -0.02
NCSTN-214ENST00000491390 SIPA1L3O60292 1781 aaPredicted RBP14.91□□□□□ -0.02
NCSTN-214ENST00000491390 PRAMEF22A3QJZ6 481 aa14.91□□□□□ -0.02
NCSTN-214ENST00000491390 IL6STP40189 918 aaPredicted RBP14.91□□□□□ -0.02
NCSTN-214ENST00000491390 SETDB2Q96T68 719 aa14.91□□□□□ -0.02
NCSTN-214ENST00000491390 EPS15P42566 896 aa14.9□□□□□ -0.02
NCSTN-214ENST00000491390 SOX10P56693 466 aa14.9□□□□□ -0.02
NCSTN-214ENST00000491390 USP50Q70EL3 339 aaPredicted RBP14.9□□□□□ -0.02
NCSTN-214ENST00000491390 GAS2L2Q8NHY3 880 aa14.9□□□□□ -0.02
NCSTN-214ENST00000491390 PSMD1Q99460 953 aa14.9□□□□□ -0.02
NCSTN-214ENST00000491390 PRKAR2BP31323 418 aa14.89□□□□□ -0.03
NCSTN-214ENST00000491390 SYNE4Q8N205 404 aa14.89□□□□□ -0.03
NCSTN-214ENST00000491390 CIAPIN1Q6FI81 312 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms