RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 ZBTB3Q9H5J0 574 aa25.21■■□□□ 1.63
SEC22A-209ENST00000491366 BCORQ6W2J9 1755 aa25.21■■□□□ 1.63
SEC22A-209ENST00000491366 COPS6Q7L5N1 327 aa25.2■■□□□ 1.62
SEC22A-209ENST00000491366 CHMP4AQ9BY43 222 aa25.2■■□□□ 1.62
SEC22A-209ENST00000491366 PARP3Q9Y6F1 533 aa25.2■■□□□ 1.62
SEC22A-209ENST00000491366 MAP3K15Q6ZN16 1313 aa25.19■■□□□ 1.62
SEC22A-209ENST00000491366 VAMP4O75379 141 aa25.19■■□□□ 1.62
SEC22A-209ENST00000491366 NFIXQ14938 502 aa25.19■■□□□ 1.62
SEC22A-209ENST00000491366 TBC1D9BQ66K14 1250 aa25.19■■□□□ 1.62
SEC22A-209ENST00000491366 STK31Q9BXU1 1019 aa25.19■■□□□ 1.62
SEC22A-209ENST00000491366 HYPKQ9NX55 129 aa25.19■■□□□ 1.62
SEC22A-209ENST00000491366 ZNF652Q9Y2D9 606 aa25.19■■□□□ 1.62
SEC22A-209ENST00000491366 DDR1Q08345 913 aa25.18■■□□□ 1.62
SEC22A-209ENST00000491366 HLFQ16534 295 aa25.18■■□□□ 1.62
SEC22A-209ENST00000491366 TM4SF1P30408 202 aa25.17■■□□□ 1.62
SEC22A-209ENST00000491366 TRMT2AQ8IZ69 625 aaKnown RBP25.16■■□□□ 1.62
SEC22A-209ENST00000491366 FHDC1Q9C0D6 1143 aaPredicted RBP25.16■■□□□ 1.62
SEC22A-209ENST00000491366 PHAXQ9H814 394 aaKnown RBP25.16■■□□□ 1.62
SEC22A-209ENST00000491366 SRCAPQ6ZRS2 3230 aa25.16■■□□□ 1.62
SEC22A-209ENST00000491366 ZBED9Q6R2W3 1325 aa25.15■■□□□ 1.62
SEC22A-209ENST00000491366 ERVV-1B6SEH8 477 aa25.15■■□□□ 1.62
SEC22A-209ENST00000491366 POLRMTO00411 1230 aaKnown RBP25.15■■□□□ 1.62
SEC22A-209ENST00000491366 CLEC4GQ6UXB4 293 aa25.15■■□□□ 1.62
SEC22A-209ENST00000491366 SETDB2Q96T68 719 aa25.14■■□□□ 1.62
SEC22A-209ENST00000491366 SLC4A2P04920 1241 aa25.13■■□□□ 1.61
SEC22A-209ENST00000491366 NIP7Q9Y221 180 aaKnown RBP eCLIP25.13■■□□□ 1.61
SEC22A-209ENST00000491366 CARMIL3Q8ND23 1372 aa25.11■■□□□ 1.61
SEC22A-209ENST00000491366 RGL2O15211 777 aa25.11■■□□□ 1.61
SEC22A-209ENST00000491366 SERPINB2P05120 415 aa25.11■■□□□ 1.61
SEC22A-209ENST00000491366 GPTP24298 496 aa25.1■■□□□ 1.61
SEC22A-209ENST00000491366 GIGYF2Q6Y7W6 1299 aaKnown RBP25.1■■□□□ 1.61
SEC22A-209ENST00000491366 ANKRD13DQ6ZTN6 518 aa25.1■■□□□ 1.61
SEC22A-209ENST00000491366 G2E3Q7L622 706 aa25.1■■□□□ 1.61
SEC22A-209ENST00000491366 PLBD2Q8NHP8 589 aa25.1■■□□□ 1.61
SEC22A-209ENST00000491366 FAM177BA6PVY3 158 aa25.09■■□□□ 1.61
SEC22A-209ENST00000491366 SYT17Q9BSW7 474 aa25.09■■□□□ 1.61
SEC22A-209ENST00000491366 NPHP1O15259 732 aa25.08■■□□□ 1.61
SEC22A-209ENST00000491366 RIC3Q7Z5B4 369 aa25.08■■□□□ 1.61
SEC22A-209ENST00000491366 ATP10DQ9P241 1426 aa25.08■■□□□ 1.61
SEC22A-209ENST00000491366 NUP98P52948 1817 aa25.07■■□□□ 1.6
SEC22A-209ENST00000491366 C10orf71Q711Q0 1435 aa25.07■■□□□ 1.6
SEC22A-209ENST00000491366 DDX58O95786 925 aaKnown RBP25.07■■□□□ 1.6
SEC22A-209ENST00000491366 NBPF5PQ86XG9 351 aaPredicted RBP25.07■■□□□ 1.6
SEC22A-209ENST00000491366 NLGN2Q8NFZ4 835 aa25.07■■□□□ 1.6
SEC22A-209ENST00000491366 CD2APQ9Y5K6 639 aa25.07■■□□□ 1.6
SEC22A-209ENST00000491366 CCDC24Q8N4L8 307 aa25.06■■□□□ 1.6
SEC22A-209ENST00000491366 YTHDC1Q96MU7 727 aaKnown RBP25.06■■□□□ 1.6
SEC22A-209ENST00000491366 FLIIQ13045 1269 aa25.05■■□□□ 1.6
SEC22A-209ENST00000491366 HSP90AB3PQ58FF7 597 aa25.05■■□□□ 1.6
SEC22A-209ENST00000491366 ZNF34Q8IZ26 560 aa25.05■■□□□ 1.6
SEC22A-209ENST00000491366 CNBD1Q8NA66 436 aa25.05■■□□□ 1.6
SEC22A-209ENST00000491366 UBN2Q6ZU65 1347 aa25.05■■□□□ 1.6
SEC22A-209ENST00000491366 AFDNP55196 1824 aaKnown RBP25.05■■□□□ 1.6
SEC22A-209ENST00000491366 PRR5LQ6MZQ0 368 aa25.04■■□□□ 1.6
SEC22A-209ENST00000491366 FKBP5Q13451 457 aaPredicted RBP25.03■■□□□ 1.6
SEC22A-209ENST00000491366 TCIRG1Q13488 830 aa25.03■■□□□ 1.6
SEC22A-209ENST00000491366 ZNF428Q96B54 188 aa25.03■■□□□ 1.6
SEC22A-209ENST00000491366 BCL2L13Q9BXK5 485 aa25.03■■□□□ 1.6
SEC22A-209ENST00000491366 MAP3K2Q9Y2U5 619 aa25.03■■□□□ 1.6
SEC22A-209ENST00000491366 NRXN2Q9P2S2 1712 aa25.03■■□□□ 1.6
SEC22A-209ENST00000491366 ARFGEF2Q9Y6D5 1785 aa25.03■■□□□ 1.6
SEC22A-209ENST00000491366 SSH1Q8WYL5 1049 aa25.02■■□□□ 1.6
SEC22A-209ENST00000491366 PI4KAP2A4QPH2 592 aa25.01■■□□□ 1.59
SEC22A-209ENST00000491366 ATP5J2-PTCD1G3V325 749 aa25.01■■□□□ 1.59
SEC22A-209ENST00000491366 CT47B1P0C2W7 299 aaPredicted RBP25.01■■□□□ 1.59
SEC22A-209ENST00000491366 GTF2E1P29083 439 aaPredicted RBP25.01■■□□□ 1.59
SEC22A-209ENST00000491366 ST5P78524 1137 aa25.01■■□□□ 1.59
SEC22A-209ENST00000491366 SUSD4Q5VX71 490 aa25.01■■□□□ 1.59
SEC22A-209ENST00000491366 KSR2Q6VAB6 950 aa25.01■■□□□ 1.59
SEC22A-209ENST00000491366 TPTE2Q6XPS3 522 aa25.01■■□□□ 1.59
SEC22A-209ENST00000491366 PI4KAP1Q8N8J0 262 aa25.01■■□□□ 1.59
SEC22A-209ENST00000491366 MYD88Q99836 296 aa25.01■■□□□ 1.59
SEC22A-209ENST00000491366 ADCY9O60503 1353 aa25.01■■□□□ 1.59
SEC22A-209ENST00000491366 ANKRD36CQ5JPF3 1778 aa25■■□□□ 1.59
SEC22A-209ENST00000491366 PARP10Q53GL7 1025 aa25■■□□□ 1.59
SEC22A-209ENST00000491366 MRPL50Q8N5N7 158 aaKnown RBP25■■□□□ 1.59
SEC22A-209ENST00000491366 SMC4Q9NTJ3 1288 aa25■■□□□ 1.59
SEC22A-209ENST00000491366 NLRP10Q86W26 655 aa24.99■■□□□ 1.59
SEC22A-209ENST00000491366 NUTM1Q86Y26 1132 aa24.99■■□□□ 1.59
SEC22A-209ENST00000491366 NYXQ9GZU5 481 aa24.99■■□□□ 1.59
SEC22A-209ENST00000491366 ALDH1L2Q3SY69 923 aa24.98■■□□□ 1.59
SEC22A-209ENST00000491366 PPP1R42Q7Z4L9 355 aa24.98■■□□□ 1.59
SEC22A-209ENST00000491366 METTL22Q9BUU2 404 aaPredicted RBP24.98■■□□□ 1.59
SEC22A-209ENST00000491366 WWC3Q9ULE0 1092 aa24.98■■□□□ 1.59
SEC22A-209ENST00000491366 KIF13BQ9NQT8 1826 aa24.98■■□□□ 1.59
SEC22A-209ENST00000491366 PXDNLA1KZ92 1463 aa24.97■■□□□ 1.59
SEC22A-209ENST00000491366 A0A0G2JLW4 131 aa24.97■■□□□ 1.59
SEC22A-209ENST00000491366 ISCA1Q9BUE6 129 aa24.97■■□□□ 1.59
SEC22A-209ENST00000491366 UTP14AQ9BVJ6 771 aaKnown RBP24.97■■□□□ 1.59
SEC22A-209ENST00000491366 NTSR2O95665 410 aa24.96■■□□□ 1.59
SEC22A-209ENST00000491366 DPEP1P16444 411 aa24.96■■□□□ 1.59
SEC22A-209ENST00000491366 TGFB2P61812 414 aa24.96■■□□□ 1.59
SEC22A-209ENST00000491366 ERFEQ4G0M1 354 aa24.96■■□□□ 1.59
SEC22A-209ENST00000491366 CACNA1FO60840 1977 aa24.96■■□□□ 1.59
SEC22A-209ENST00000491366 IBTKQ9P2D0 1353 aaPredicted RBP24.95■■□□□ 1.59
SEC22A-209ENST00000491366 F6X3S4 739 aa24.95■■□□□ 1.58
SEC22A-209ENST00000491366 CHRNA5P30532 468 aa24.95■■□□□ 1.58
SEC22A-209ENST00000491366 PELP1Q8IZL8 1130 aaKnown RBP24.95■■□□□ 1.58
SEC22A-209ENST00000491366 BRIP1Q9BX63 1249 aa24.95■■□□□ 1.58
SEC22A-209ENST00000491366 TRMT112Q9UI30 125 aaKnown RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms