RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 HLFQ16534 295 aa17.86■□□□□ 0.45
TRAIP-211ENST00000491060 KRT24Q2M2I5 525 aa17.86■□□□□ 0.45
TRAIP-211ENST00000491060 PRR5LQ6MZQ0 368 aa17.86■□□□□ 0.45
TRAIP-211ENST00000491060 DLEC1Q9Y238 1755 aa17.86■□□□□ 0.45
TRAIP-211ENST00000491060 ZNF316A6NFI3 1004 aaPredicted RBP17.85■□□□□ 0.45
TRAIP-211ENST00000491060 NUP98P52948 1817 aa17.85■□□□□ 0.45
TRAIP-211ENST00000491060 CNBD1Q8NA66 436 aa17.85■□□□□ 0.45
TRAIP-211ENST00000491060 ZNF428Q96B54 188 aa17.85■□□□□ 0.45
TRAIP-211ENST00000491060 ZBTB3Q9H5J0 574 aa17.85■□□□□ 0.45
TRAIP-211ENST00000491060 RASSF7Q02833 373 aa17.84■□□□□ 0.45
TRAIP-211ENST00000491060 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
TRAIP-211ENST00000491060 GPBP1L1Q9HC44 474 aaPredicted RBP17.84■□□□□ 0.45
TRAIP-211ENST00000491060 NIP7Q9Y221 180 aaKnown RBP eCLIP17.84■□□□□ 0.45
TRAIP-211ENST00000491060 H0YIN7 160 aa17.83■□□□□ 0.44
TRAIP-211ENST00000491060 GPTP24298 496 aa17.83■□□□□ 0.44
TRAIP-211ENST00000491060 LMOD3Q0VAK6 560 aa17.83■□□□□ 0.44
TRAIP-211ENST00000491060 NBPF5PQ86XG9 351 aaPredicted RBP17.83■□□□□ 0.44
TRAIP-211ENST00000491060 TRIM35Q9UPQ4 493 aa17.83■□□□□ 0.44
TRAIP-211ENST00000491060 APAF1O14727 1248 aa17.82■□□□□ 0.44
TRAIP-211ENST00000491060 ST5P78524 1137 aa17.82■□□□□ 0.44
TRAIP-211ENST00000491060 C9orf131Q5VYM1 1079 aa17.82■□□□□ 0.44
TRAIP-211ENST00000491060 ZNF652Q9Y2D9 606 aa17.82■□□□□ 0.44
TRAIP-211ENST00000491060 SBF1O95248 1867 aa17.82■□□□□ 0.44
TRAIP-211ENST00000491060 PROSER3Q2NL68 480 aa17.81■□□□□ 0.44
TRAIP-211ENST00000491060 KIF6Q6ZMV9 814 aa17.81■□□□□ 0.44
TRAIP-211ENST00000491060 RNF181Q9P0P0 153 aa17.81■□□□□ 0.44
TRAIP-211ENST00000491060 GTF2E1P29083 439 aaPredicted RBP17.8■□□□□ 0.44
TRAIP-211ENST00000491060 AIMP1Q12904 312 aaKnown RBP17.8■□□□□ 0.44
TRAIP-211ENST00000491060 NUTM1Q86Y26 1132 aa17.79■□□□□ 0.44
TRAIP-211ENST00000491060 TTLL6Q8N841 843 aa17.79■□□□□ 0.44
TRAIP-211ENST00000491060 SLX4Q8IY92 1834 aa17.79■□□□□ 0.44
TRAIP-211ENST00000491060 ADCY9O60503 1353 aa17.79■□□□□ 0.44
TRAIP-211ENST00000491060 C21orf2O43822 256 aa17.78■□□□□ 0.44
TRAIP-211ENST00000491060 PDE6BP35913 854 aa17.78■□□□□ 0.44
TRAIP-211ENST00000491060 C1QTNF8P60827 252 aa17.78■□□□□ 0.44
TRAIP-211ENST00000491060 SALL2Q9Y467 1007 aaPredicted RBP17.78■□□□□ 0.44
TRAIP-211ENST00000491060 TNRC6CQ9HCJ0 1690 aaKnown RBP17.77■□□□□ 0.44
TRAIP-211ENST00000491060 BRIP1Q9BX63 1249 aa17.77■□□□□ 0.44
TRAIP-211ENST00000491060 MAP3K15Q6ZN16 1313 aa17.76■□□□□ 0.43
TRAIP-211ENST00000491060 ELL2O00472 640 aaPredicted RBP17.76■□□□□ 0.43
TRAIP-211ENST00000491060 ANP32CO43423 234 aa17.76■□□□□ 0.43
TRAIP-211ENST00000491060 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
TRAIP-211ENST00000491060 CLEC4GQ6UXB4 293 aa17.75■□□□□ 0.43
TRAIP-211ENST00000491060 TCERG1O14776 1098 aaKnown RBP17.74■□□□□ 0.43
TRAIP-211ENST00000491060 ERFEQ4G0M1 354 aa17.74■□□□□ 0.43
TRAIP-211ENST00000491060 OLFM4Q6UX06 510 aa17.74■□□□□ 0.43
TRAIP-211ENST00000491060 TPTE2Q6XPS3 522 aa17.74■□□□□ 0.43
TRAIP-211ENST00000491060 XAGE3Q8WTP9 111 aa17.74■□□□□ 0.43
TRAIP-211ENST00000491060 NMRK2Q9NPI5 230 aa17.74■□□□□ 0.43
TRAIP-211ENST00000491060 TIAM2Q8IVF5 1701 aa17.74■□□□□ 0.43
TRAIP-211ENST00000491060 CHL1O00533 1208 aa17.73■□□□□ 0.43
TRAIP-211ENST00000491060 PRELPP51888 382 aa17.73■□□□□ 0.43
TRAIP-211ENST00000491060 PDIA6Q15084 440 aa17.73■□□□□ 0.43
TRAIP-211ENST00000491060 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
TRAIP-211ENST00000491060 CHPF2Q9P2E5 772 aa17.73■□□□□ 0.43
TRAIP-211ENST00000491060 ABCC12Q96J65 1359 aa17.73■□□□□ 0.43
TRAIP-211ENST00000491060 UBN2Q6ZU65 1347 aa17.72■□□□□ 0.43
TRAIP-211ENST00000491060 HDGFL1Q5TGJ6 251 aa17.72■□□□□ 0.43
TRAIP-211ENST00000491060 SUSD4Q5VX71 490 aa17.72■□□□□ 0.43
TRAIP-211ENST00000491060 PRPF40BQ6NWY9 871 aaKnown RBP17.72■□□□□ 0.43
TRAIP-211ENST00000491060 COPS6Q7L5N1 327 aa17.72■□□□□ 0.43
TRAIP-211ENST00000491060 ANKRD36CQ5JPF3 1778 aa17.71■□□□□ 0.43
TRAIP-211ENST00000491060 SRGNP10124 158 aa17.71■□□□□ 0.43
TRAIP-211ENST00000491060 MASTLQ96GX5 879 aa17.71■□□□□ 0.43
TRAIP-211ENST00000491060 ARFGEF2Q9Y6D5 1785 aa17.71■□□□□ 0.43
TRAIP-211ENST00000491060 FER1L6Q2WGJ9 1857 aa17.7■□□□□ 0.42
TRAIP-211ENST00000491060 NFKBIEO00221 500 aa17.7■□□□□ 0.42
TRAIP-211ENST00000491060 DUSP27Q5VZP5 1158 aa17.7■□□□□ 0.42
TRAIP-211ENST00000491060 SLC51AQ86UW1 340 aa17.7■□□□□ 0.42
TRAIP-211ENST00000491060 ERVV-1B6SEH8 477 aa17.69■□□□□ 0.42
TRAIP-211ENST00000491060 STYK1Q6J9G0 422 aa17.69■□□□□ 0.42
TRAIP-211ENST00000491060 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
TRAIP-211ENST00000491060 TSR2Q969E8 191 aaKnown RBP17.69■□□□□ 0.42
TRAIP-211ENST00000491060 CNKSR1Q969H4 720 aa17.69■□□□□ 0.42
TRAIP-211ENST00000491060 CFAP44Q96MT7 982 aa17.69■□□□□ 0.42
TRAIP-211ENST00000491060 RRAGCQ9HB90 399 aa17.69■□□□□ 0.42
TRAIP-211ENST00000491060 BABAM1Q9NWV8 329 aa17.69■□□□□ 0.42
TRAIP-211ENST00000491060 KIF3CO14782 793 aa17.68■□□□□ 0.42
TRAIP-211ENST00000491060 GIGYF2Q6Y7W6 1299 aaKnown RBP17.68■□□□□ 0.42
TRAIP-211ENST00000491060 C3orf67Q6ZVT6 689 aa17.68■□□□□ 0.42
TRAIP-211ENST00000491060 NYXQ9GZU5 481 aa17.68■□□□□ 0.42
TRAIP-211ENST00000491060 ERBB4Q15303 1308 aa17.68■□□□□ 0.42
TRAIP-211ENST00000491060 NPR1P16066 1061 aa17.67■□□□□ 0.42
TRAIP-211ENST00000491060 LMNB1P20700 586 aa17.67■□□□□ 0.42
TRAIP-211ENST00000491060 RTL5Q5HYW3 569 aaPredicted RBP17.67■□□□□ 0.42
TRAIP-211ENST00000491060 LRP10Q7Z4F1 713 aa17.67■□□□□ 0.42
TRAIP-211ENST00000491060 TAF1P21675 1872 aa17.67■□□□□ 0.42
TRAIP-211ENST00000491060 LAMB2P55268 1798 aa17.66■□□□□ 0.42
TRAIP-211ENST00000491060 GNAI1P63096 354 aa17.66■□□□□ 0.42
TRAIP-211ENST00000491060 ZNF34Q8IZ26 560 aa17.66■□□□□ 0.42
TRAIP-211ENST00000491060 SYNE4Q8N205 404 aa17.66■□□□□ 0.42
TRAIP-211ENST00000491060 RPGRQ92834 1020 aaKnown RBP17.66■□□□□ 0.42
TRAIP-211ENST00000491060 DDX21Q9NR30 783 aaKnown RBP eCLIP17.66■□□□□ 0.42
TRAIP-211ENST00000491060 DICER1Q9UPY3 1922 aaKnown RBP17.66■□□□□ 0.42
TRAIP-211ENST00000491060 ATP5J2-PTCD1G3V325 749 aa17.65■□□□□ 0.42
TRAIP-211ENST00000491060 NTSR2O95665 410 aa17.65■□□□□ 0.42
TRAIP-211ENST00000491060 C16orf71Q8IYS4 520 aaPredicted RBP17.65■□□□□ 0.42
TRAIP-211ENST00000491060 C8orf58Q8NAV2 365 aa17.65■□□□□ 0.42
TRAIP-211ENST00000491060 UTP14AQ9BVJ6 771 aaKnown RBP17.65■□□□□ 0.42
TRAIP-211ENST00000491060 TAOK3Q9H2K8 898 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms