RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 SGIP1Q9BQI5 828 aa20.3■□□□□ 0.84
TRA2A-208ENST00000490942 BCL2L12Q9HB09 334 aa20.3■□□□□ 0.84
TRA2A-208ENST00000490942 SRP68Q9UHB9 627 aaKnown RBP20.3■□□□□ 0.84
TRA2A-208ENST00000490942 ANXA1P04083 346 aa20.29■□□□□ 0.84
TRA2A-208ENST00000490942 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
TRA2A-208ENST00000490942 POLD1P28340 1107 aa20.29■□□□□ 0.84
TRA2A-208ENST00000490942 BRPF1P55201 1214 aaPredicted RBP20.29■□□□□ 0.84
TRA2A-208ENST00000490942 PLBD2Q8NHP8 589 aa20.29■□□□□ 0.84
TRA2A-208ENST00000490942 BCORQ6W2J9 1755 aa20.29■□□□□ 0.84
TRA2A-208ENST00000490942 DDX58O95786 925 aaKnown RBP20.28■□□□□ 0.84
TRA2A-208ENST00000490942 FKBP8Q14318 412 aa20.28■□□□□ 0.84
TRA2A-208ENST00000490942 HSP90AB3PQ58FF7 597 aa20.28■□□□□ 0.84
TRA2A-208ENST00000490942 TTLL7Q6ZT98 887 aa20.28■□□□□ 0.84
TRA2A-208ENST00000490942 ATP10DQ9P241 1426 aa20.27■□□□□ 0.84
TRA2A-208ENST00000490942 TM4SF1P30408 202 aa20.27■□□□□ 0.84
TRA2A-208ENST00000490942 PTGER2P43116 358 aa20.27■□□□□ 0.84
TRA2A-208ENST00000490942 GIGYF2Q6Y7W6 1299 aaKnown RBP20.27■□□□□ 0.84
TRA2A-208ENST00000490942 ANKRD13DQ6ZTN6 518 aa20.27■□□□□ 0.84
TRA2A-208ENST00000490942 ARXQ96QS3 562 aa20.27■□□□□ 0.84
TRA2A-208ENST00000490942 LRP5O75197 1615 aa20.27■□□□□ 0.83
TRA2A-208ENST00000490942 FLIIQ13045 1269 aa20.25■□□□□ 0.83
TRA2A-208ENST00000490942 PHAXQ9H814 394 aaKnown RBP20.25■□□□□ 0.83
TRA2A-208ENST00000490942 ATF5Q9Y2D1 282 aaPredicted RBP20.25■□□□□ 0.83
TRA2A-208ENST00000490942 MMP10P09238 476 aa20.24■□□□□ 0.83
TRA2A-208ENST00000490942 AIMP1Q12904 312 aaKnown RBP20.24■□□□□ 0.83
TRA2A-208ENST00000490942 NFIXQ14938 502 aa20.24■□□□□ 0.83
TRA2A-208ENST00000490942 KSR2Q6VAB6 950 aa20.24■□□□□ 0.83
TRA2A-208ENST00000490942 SSH1Q8WYL5 1049 aa20.24■□□□□ 0.83
TRA2A-208ENST00000490942 CARMIL3Q8ND23 1372 aa20.23■□□□□ 0.83
TRA2A-208ENST00000490942 RARSP54136 660 aaKnown RBP20.23■□□□□ 0.83
TRA2A-208ENST00000490942 HLFQ16534 295 aa20.23■□□□□ 0.83
TRA2A-208ENST00000490942 MSL1Q68DK7 614 aa20.23■□□□□ 0.83
TRA2A-208ENST00000490942 MRPL50Q8N5N7 158 aaKnown RBP20.23■□□□□ 0.83
TRA2A-208ENST00000490942 SETDB2Q96T68 719 aa20.23■□□□□ 0.83
TRA2A-208ENST00000490942 ZBTB3Q9H5J0 574 aa20.23■□□□□ 0.83
TRA2A-208ENST00000490942 PTPRCP08575 1304 aa20.23■□□□□ 0.83
TRA2A-208ENST00000490942 IBTKQ9P2D0 1353 aaPredicted RBP20.22■□□□□ 0.83
TRA2A-208ENST00000490942 TRIM28Q13263 835 aaKnown RBP20.22■□□□□ 0.83
TRA2A-208ENST00000490942 TCIRG1Q13488 830 aa20.22■□□□□ 0.83
TRA2A-208ENST00000490942 TBC1D9BQ66K14 1250 aa20.22■□□□□ 0.83
TRA2A-208ENST00000490942 ZNF34Q8IZ26 560 aa20.22■□□□□ 0.83
TRA2A-208ENST00000490942 PARP3Q9Y6F1 533 aa20.22■□□□□ 0.83
TRA2A-208ENST00000490942 POLRMTO00411 1230 aaKnown RBP20.21■□□□□ 0.83
TRA2A-208ENST00000490942 TCERG1O14776 1098 aaKnown RBP20.21■□□□□ 0.83
TRA2A-208ENST00000490942 PARP10Q53GL7 1025 aa20.21■□□□□ 0.83
TRA2A-208ENST00000490942 G2E3Q7L622 706 aa20.21■□□□□ 0.83
TRA2A-208ENST00000490942 RIC3Q7Z5B4 369 aa20.21■□□□□ 0.83
TRA2A-208ENST00000490942 YTHDC1Q96MU7 727 aaKnown RBP20.21■□□□□ 0.83
TRA2A-208ENST00000490942 SMC4Q9NTJ3 1288 aa20.21■□□□□ 0.83
TRA2A-208ENST00000490942 DDR1Q08345 913 aa20.2■□□□□ 0.82
TRA2A-208ENST00000490942 FKBP5Q13451 457 aaPredicted RBP20.2■□□□□ 0.82
TRA2A-208ENST00000490942 NIP7Q9Y221 180 aaKnown RBP eCLIP20.2■□□□□ 0.82
TRA2A-208ENST00000490942 RNF123Q5XPI4 1314 aa20.2■□□□□ 0.82
TRA2A-208ENST00000490942 KIF16BQ96L93 1317 aa20.2■□□□□ 0.82
TRA2A-208ENST00000490942 PI4KAP2A4QPH2 592 aa20.19■□□□□ 0.82
TRA2A-208ENST00000490942 PI4KAP1Q8N8J0 262 aa20.19■□□□□ 0.82
TRA2A-208ENST00000490942 ARHGAP45Q92619 1136 aa20.19■□□□□ 0.82
TRA2A-208ENST00000490942 ISCA1Q9BUE6 129 aa20.19■□□□□ 0.82
TRA2A-208ENST00000490942 METTL22Q9BUU2 404 aaPredicted RBP20.19■□□□□ 0.82
TRA2A-208ENST00000490942 ADCY9O60503 1353 aa20.19■□□□□ 0.82
TRA2A-208ENST00000490942 NUP98P52948 1817 aa20.18■□□□□ 0.82
TRA2A-208ENST00000490942 NRXN2Q9P2S2 1712 aa20.17■□□□□ 0.82
TRA2A-208ENST00000490942 SERPINB2P05120 415 aa20.17■□□□□ 0.82
TRA2A-208ENST00000490942 NEXNQ0ZGT2 675 aa20.17■□□□□ 0.82
TRA2A-208ENST00000490942 TPTE2Q6XPS3 522 aa20.17■□□□□ 0.82
TRA2A-208ENST00000490942 DNAAF4Q8WXU2 420 aa20.17■□□□□ 0.82
TRA2A-208ENST00000490942 NYXQ9GZU5 481 aa20.17■□□□□ 0.82
TRA2A-208ENST00000490942 MAP3K2Q9Y2U5 619 aa20.17■□□□□ 0.82
TRA2A-208ENST00000490942 CD2APQ9Y5K6 639 aa20.17■□□□□ 0.82
TRA2A-208ENST00000490942 ANKRD36CQ5JPF3 1778 aa20.16■□□□□ 0.82
TRA2A-208ENST00000490942 ARFGEF2Q9Y6D5 1785 aa20.16■□□□□ 0.82
TRA2A-208ENST00000490942 IPO8O15397 1037 aaKnown RBP20.15■□□□□ 0.82
TRA2A-208ENST00000490942 BICDL1Q6ZP65 573 aa20.15■□□□□ 0.82
TRA2A-208ENST00000490942 PPP1R42Q7Z4L9 355 aa20.15■□□□□ 0.82
TRA2A-208ENST00000490942 NLRP10Q86W26 655 aa20.15■□□□□ 0.82
TRA2A-208ENST00000490942 CCDC191Q8NCU4 936 aa20.15■□□□□ 0.82
TRA2A-208ENST00000490942 C10orf71Q711Q0 1435 aa20.15■□□□□ 0.82
TRA2A-208ENST00000490942 UBN2Q6ZU65 1347 aa20.14■□□□□ 0.81
TRA2A-208ENST00000490942 NBPF5PQ86XG9 351 aaPredicted RBP20.14■□□□□ 0.81
TRA2A-208ENST00000490942 CNBD1Q8NA66 436 aa20.14■□□□□ 0.81
TRA2A-208ENST00000490942 LINS1Q8NG48 757 aa20.14■□□□□ 0.81
TRA2A-208ENST00000490942 BCL2L13Q9BXK5 485 aa20.14■□□□□ 0.81
TRA2A-208ENST00000490942 API5Q9BZZ5 524 aaKnown RBP20.14■□□□□ 0.81
TRA2A-208ENST00000490942 PPP1R1BQ9UD71 204 aaPredicted RBP20.14■□□□□ 0.81
TRA2A-208ENST00000490942 PDZRN3Q9UPQ7 1066 aa20.14■□□□□ 0.81
TRA2A-208ENST00000490942 PXDNLA1KZ92 1463 aa20.13■□□□□ 0.81
TRA2A-208ENST00000490942 RIC1Q4ADV7 1423 aa20.13■□□□□ 0.81
TRA2A-208ENST00000490942 PRR5LQ6MZQ0 368 aa20.13■□□□□ 0.81
TRA2A-208ENST00000490942 GPTP24298 496 aa20.12■□□□□ 0.81
TRA2A-208ENST00000490942 MYD88Q99836 296 aa20.12■□□□□ 0.81
TRA2A-208ENST00000490942 UTP14AQ9BVJ6 771 aaKnown RBP20.12■□□□□ 0.81
TRA2A-208ENST00000490942 NTSR2O95665 410 aa20.11■□□□□ 0.81
TRA2A-208ENST00000490942 TGFB2P61812 414 aa20.11■□□□□ 0.81
TRA2A-208ENST00000490942 ST5P78524 1137 aa20.11■□□□□ 0.81
TRA2A-208ENST00000490942 SUSD4Q5VX71 490 aa20.11■□□□□ 0.81
TRA2A-208ENST00000490942 BRIP1Q9BX63 1249 aa20.11■□□□□ 0.81
TRA2A-208ENST00000490942 CWC25Q9NXE8 425 aaPredicted RBP20.11■□□□□ 0.81
TRA2A-208ENST00000490942 RCAN3Q9UKA8 241 aa20.11■□□□□ 0.81
TRA2A-208ENST00000490942 NOB1Q9ULX3 412 aaKnown RBP20.11■□□□□ 0.81
TRA2A-208ENST00000490942 ALDH1L1O75891 902 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms