RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 NRAPQ86VF7 1730 aa12.51□□□□□ -0.41
HDAC9-225ENST00000490851 GLI3P10071 1580 aa12.51□□□□□ -0.41
HDAC9-225ENST00000490851 SEC24BO95487 1268 aa12.51□□□□□ -0.41
HDAC9-225ENST00000490851 DDB1Q16531 1140 aa12.51□□□□□ -0.41
HDAC9-225ENST00000490851 CERKQ8TCT0 537 aa12.51□□□□□ -0.41
HDAC9-225ENST00000490851 KCPQ6ZWJ8 1503 aa12.51□□□□□ -0.41
HDAC9-225ENST00000490851 BBXQ8WY36 941 aaPredicted RBP12.5□□□□□ -0.41
HDAC9-225ENST00000490851 MYD88Q99836 296 aa12.5□□□□□ -0.41
HDAC9-225ENST00000490851 OTUD7AQ8TE49 926 aaPredicted RBP12.5□□□□□ -0.41
HDAC9-225ENST00000490851 ACSBG1Q96GR2 724 aa12.5□□□□□ -0.41
HDAC9-225ENST00000490851 SPATA31A5Q5VU36 1347 aa12.5□□□□□ -0.41
HDAC9-225ENST00000490851 SPATA31A7Q8IWB4 1347 aa12.5□□□□□ -0.41
HDAC9-225ENST00000490851 JCADQ9P266 1359 aa12.5□□□□□ -0.41
HDAC9-225ENST00000490851 TNS2Q63HR2 1409 aa12.49□□□□□ -0.41
HDAC9-225ENST00000490851 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
HDAC9-225ENST00000490851 PRIM1P49642 420 aaKnown RBP12.49□□□□□ -0.41
HDAC9-225ENST00000490851 ATP8B2P98198 1209 aa12.49□□□□□ -0.41
HDAC9-225ENST00000490851 FAM98CQ17RN3 349 aaKnown RBP12.49□□□□□ -0.41
HDAC9-225ENST00000490851 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
HDAC9-225ENST00000490851 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
HDAC9-225ENST00000490851 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
HDAC9-225ENST00000490851 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
HDAC9-225ENST00000490851 NEXNQ0ZGT2 675 aa12.49□□□□□ -0.41
HDAC9-225ENST00000490851 LRP10Q7Z4F1 713 aa12.49□□□□□ -0.41
HDAC9-225ENST00000490851 PPP1R42Q7Z4L9 355 aa12.49□□□□□ -0.41
HDAC9-225ENST00000490851 JARID2Q92833 1246 aaPredicted RBP12.49□□□□□ -0.41
HDAC9-225ENST00000490851 ATG3Q9NT62 314 aa12.49□□□□□ -0.41
HDAC9-225ENST00000490851 WNK3Q9BYP7 1800 aa12.49□□□□□ -0.41
HDAC9-225ENST00000490851 PAPPAQ13219 1627 aa12.48□□□□□ -0.41
HDAC9-225ENST00000490851 UBR2Q8IWV8 1755 aa12.48□□□□□ -0.41
HDAC9-225ENST00000490851 SRGAP3O43295 1099 aa12.48□□□□□ -0.41
HDAC9-225ENST00000490851 LINS1Q8NG48 757 aa12.48□□□□□ -0.41
HDAC9-225ENST00000490851 SLIT2O94813 1529 aa12.48□□□□□ -0.41
HDAC9-225ENST00000490851 LAMB4A4D0S4 1761 aa12.48□□□□□ -0.41
HDAC9-225ENST00000490851 ITGB4P16144 1822 aa12.48□□□□□ -0.41
HDAC9-225ENST00000490851 ATP5J2-PTCD1G3V325 749 aa12.48□□□□□ -0.41
HDAC9-225ENST00000490851 ALDH1L1O75891 902 aa12.48□□□□□ -0.41
HDAC9-225ENST00000490851 IGKV5-2P06315 115 aa12.48□□□□□ -0.41
HDAC9-225ENST00000490851 UNC5CLQ8IV45 518 aa12.48□□□□□ -0.41
HDAC9-225ENST00000490851 DNAJC10Q8IXB1 793 aa12.48□□□□□ -0.41
HDAC9-225ENST00000490851 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
HDAC9-225ENST00000490851 SECISBP2LQ93073 1101 aaKnown RBP12.47□□□□□ -0.41
HDAC9-225ENST00000490851 ARID3AQ99856 593 aa12.47□□□□□ -0.41
HDAC9-225ENST00000490851 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.47□□□□□ -0.41
HDAC9-225ENST00000490851 GTF2E1P29083 439 aaPredicted RBP12.47□□□□□ -0.41
HDAC9-225ENST00000490851 MARCH10Q8NA82 808 aaPredicted RBP12.47□□□□□ -0.41
HDAC9-225ENST00000490851 CDCA7Q9BWT1 371 aaPredicted RBP12.47□□□□□ -0.41
HDAC9-225ENST00000490851 ZBTB3Q9H5J0 574 aa12.47□□□□□ -0.41
HDAC9-225ENST00000490851 THRAP3Q9Y2W1 955 aaKnown RBP12.47□□□□□ -0.41
HDAC9-225ENST00000490851 NEURL1BA8MQ27 555 aa12.46□□□□□ -0.41
HDAC9-225ENST00000490851 GRM8O00222 908 aa12.46□□□□□ -0.41
HDAC9-225ENST00000490851 RRP9O43818 475 aaKnown RBP12.46□□□□□ -0.41
HDAC9-225ENST00000490851 HSPA1LP34931 641 aa12.46□□□□□ -0.41
HDAC9-225ENST00000490851 MEX3CQ5U5Q3 659 aaKnown RBP12.46□□□□□ -0.41
HDAC9-225ENST00000490851 PLEKHM2Q8IWE5 1019 aa12.46□□□□□ -0.41
HDAC9-225ENST00000490851 METTL22Q9BUU2 404 aaPredicted RBP12.46□□□□□ -0.41
HDAC9-225ENST00000490851 BCL9O00512 1426 aa12.46□□□□□ -0.42
HDAC9-225ENST00000490851 SUCLG2Q96I99 432 aa12.46□□□□□ -0.42
HDAC9-225ENST00000490851 RNF216Q9NWF9 866 aaPredicted RBP12.46□□□□□ -0.42
HDAC9-225ENST00000490851 DOT1LQ8TEK3 1739 aa12.46□□□□□ -0.42
HDAC9-225ENST00000490851 NWD2Q9ULI1 1742 aa12.46□□□□□ -0.42
HDAC9-225ENST00000490851 SURF6O75683 361 aaKnown RBP12.45□□□□□ -0.42
HDAC9-225ENST00000490851 TSHZ3Q63HK5 1081 aa12.45□□□□□ -0.42
HDAC9-225ENST00000490851 LRP6O75581 1613 aa12.45□□□□□ -0.42
HDAC9-225ENST00000490851 MFAP1P55081 439 aaKnown RBP12.45□□□□□ -0.42
HDAC9-225ENST00000490851 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
HDAC9-225ENST00000490851 SSH3Q8TE77 659 aa12.45□□□□□ -0.42
HDAC9-225ENST00000490851 IPO9Q96P70 1041 aaKnown RBP12.45□□□□□ -0.42
HDAC9-225ENST00000490851 LRRCC1Q9C099 1032 aa12.45□□□□□ -0.42
HDAC9-225ENST00000490851 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
HDAC9-225ENST00000490851 USP21Q9UK80 565 aa12.45□□□□□ -0.42
HDAC9-225ENST00000490851 GCKRQ14397 625 aa12.44□□□□□ -0.42
HDAC9-225ENST00000490851 PLBD2Q8NHP8 589 aa12.44□□□□□ -0.42
HDAC9-225ENST00000490851 BICC1Q9H694 974 aaKnown RBP12.44□□□□□ -0.42
HDAC9-225ENST00000490851 BCL9LQ86UU0 1499 aa12.44□□□□□ -0.42
HDAC9-225ENST00000490851 OS9Q13438 667 aaPredicted RBP12.43□□□□□ -0.42
HDAC9-225ENST00000490851 BMP2KLQ5H9B9 411 aa12.43□□□□□ -0.42
HDAC9-225ENST00000490851 SLC4A9Q96Q91 983 aa12.43□□□□□ -0.42
HDAC9-225ENST00000490851 ARFGEF2Q9Y6D5 1785 aa12.43□□□□□ -0.42
HDAC9-225ENST00000490851 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
HDAC9-225ENST00000490851 ERBB4Q15303 1308 aa12.43□□□□□ -0.42
HDAC9-225ENST00000490851 GSPT1P15170 499 aaKnown RBP12.43□□□□□ -0.42
HDAC9-225ENST00000490851 BARGINQ6ZT62 677 aa12.43□□□□□ -0.42
HDAC9-225ENST00000490851 UBE3BQ7Z3V4 1068 aa12.43□□□□□ -0.42
HDAC9-225ENST00000490851 PA2G4Q9UQ80 394 aaKnown RBP12.43□□□□□ -0.42
HDAC9-225ENST00000490851 STARD3NLO95772 234 aa12.42□□□□□ -0.42
HDAC9-225ENST00000490851 POLA2Q14181 598 aa12.42□□□□□ -0.42
HDAC9-225ENST00000490851 UPF2Q9HAU5 1272 aaKnown RBP12.42□□□□□ -0.42
HDAC9-225ENST00000490851 AFDNP55196 1824 aaKnown RBP12.42□□□□□ -0.42
HDAC9-225ENST00000490851 KCNQ2O43526 872 aa12.42□□□□□ -0.42
HDAC9-225ENST00000490851 VPS72Q15906 364 aa12.42□□□□□ -0.42
HDAC9-225ENST00000490851 KAZALD1Q96I82 304 aa12.42□□□□□ -0.42
HDAC9-225ENST00000490851 SPATA31A6Q5VVP1 1343 aa12.42□□□□□ -0.42
HDAC9-225ENST00000490851 A0A087WZG4 1122 aa12.41□□□□□ -0.42
HDAC9-225ENST00000490851 CLSTN1O94985 981 aa12.41□□□□□ -0.42
HDAC9-225ENST00000490851 FAM182BQ5T319 152 aa12.41□□□□□ -0.42
HDAC9-225ENST00000490851 TTC22Q5TAA0 569 aa12.41□□□□□ -0.42
HDAC9-225ENST00000490851 CNPY4Q8N129 248 aa12.41□□□□□ -0.42
HDAC9-225ENST00000490851 EPHA10Q5JZY3 1008 aa12.41□□□□□ -0.42
HDAC9-225ENST00000490851 NUTM1Q86Y26 1132 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms