RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-222ENST00000490839 NPHP1O15259 732 aa20.54■□□□□ 0.88
AGAP3-222ENST00000490839 CHADLQ6NUI6 762 aa20.54■□□□□ 0.88
AGAP3-222ENST00000490839 A1BGP04217 495 aa20.53■□□□□ 0.88
AGAP3-222ENST00000490839 SRGNP10124 158 aa20.53■□□□□ 0.88
AGAP3-222ENST00000490839 PRPF40BQ6NWY9 871 aaKnown RBP20.53■□□□□ 0.88
AGAP3-222ENST00000490839 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
AGAP3-222ENST00000490839 CREBZFQ9NS37 354 aa20.53■□□□□ 0.88
AGAP3-222ENST00000490839 MASTLQ96GX5 879 aa20.52■□□□□ 0.88
AGAP3-222ENST00000490839 DZIP3Q86Y13 1208 aaKnown RBP20.51■□□□□ 0.87
AGAP3-222ENST00000490839 BTBD11A6QL63 1104 aa20.5■□□□□ 0.87
AGAP3-222ENST00000490839 DDNO94850 711 aaPredicted RBP20.5■□□□□ 0.87
AGAP3-222ENST00000490839 SCN4AP35499 1836 aa20.5■□□□□ 0.87
AGAP3-222ENST00000490839 IQCA1LA6NCM1 817 aa20.49■□□□□ 0.87
AGAP3-222ENST00000490839 POTEIP0CG38 1075 aa20.48■□□□□ 0.87
AGAP3-222ENST00000490839 POTEJP0CG39 1038 aa20.48■□□□□ 0.87
AGAP3-222ENST00000490839 CLEC4GQ6UXB4 293 aa20.48■□□□□ 0.87
AGAP3-222ENST00000490839 KCNQ3O43525 872 aa20.47■□□□□ 0.87
AGAP3-222ENST00000490839 CCDC93Q567U6 631 aa20.47■□□□□ 0.87
AGAP3-222ENST00000490839 NBPF5PQ86XG9 351 aaPredicted RBP20.47■□□□□ 0.87
AGAP3-222ENST00000490839 L3MBTL3Q96JM7 780 aaPredicted RBP20.47■□□□□ 0.87
AGAP3-222ENST00000490839 MKRN1Q9UHC7 482 aaKnown RBP20.47■□□□□ 0.87
AGAP3-222ENST00000490839 ZNF652Q9Y2D9 606 aa20.47■□□□□ 0.87
AGAP3-222ENST00000490839 NPR1P16066 1061 aa20.46■□□□□ 0.87
AGAP3-222ENST00000490839 PRKAR2BP31323 418 aa20.46■□□□□ 0.87
AGAP3-222ENST00000490839 LDHDQ86WU2 507 aa20.46■□□□□ 0.87
AGAP3-222ENST00000490839 C7orf43Q8WVR3 580 aa20.46■□□□□ 0.87
AGAP3-222ENST00000490839 USP16Q9Y5T5 823 aa20.46■□□□□ 0.87
AGAP3-222ENST00000490839 CNTNAP1P78357 1384 aa20.46■□□□□ 0.87
AGAP3-222ENST00000490839 RGL2O15211 777 aa20.45■□□□□ 0.86
AGAP3-222ENST00000490839 PHACTR3Q96KR7 559 aa20.45■□□□□ 0.86
AGAP3-222ENST00000490839 RSPH6AQ9H0K4 717 aa20.45■□□□□ 0.86
AGAP3-222ENST00000490839 PASKQ96RG2 1323 aa20.45■□□□□ 0.86
AGAP3-222ENST00000490839 KLRG2A4D1S0 409 aaPredicted RBP20.44■□□□□ 0.86
AGAP3-222ENST00000490839 SNRPA1P09661 255 aaKnown RBP20.44■□□□□ 0.86
AGAP3-222ENST00000490839 PIP4K2AP48426 406 aaPredicted RBP20.44■□□□□ 0.86
AGAP3-222ENST00000490839 CFAP53Q96M91 514 aa20.44■□□□□ 0.86
AGAP3-222ENST00000490839 TAF1DQ9H5J8 278 aaPredicted RBP20.44■□□□□ 0.86
AGAP3-222ENST00000490839 FKBP4Q02790 459 aaKnown RBP eCLIP20.43■□□□□ 0.86
AGAP3-222ENST00000490839 CNGB1Q14028 1251 aaPredicted RBP20.43■□□□□ 0.86
AGAP3-222ENST00000490839 PRAMEF22A3QJZ6 481 aa20.41■□□□□ 0.86
AGAP3-222ENST00000490839 TPTE2Q6XPS3 522 aa20.41■□□□□ 0.86
AGAP3-222ENST00000490839 RTF1Q92541 710 aaKnown RBP20.41■□□□□ 0.86
AGAP3-222ENST00000490839 NIP7Q9Y221 180 aaKnown RBP eCLIP20.41■□□□□ 0.86
AGAP3-222ENST00000490839 ZNF541Q9H0D2 1346 aa20.41■□□□□ 0.86
AGAP3-222ENST00000490839 RTKN2Q8IZC4 609 aa20.4■□□□□ 0.86
AGAP3-222ENST00000490839 ADAMTSL1Q8N6G6 1762 aa20.4■□□□□ 0.86
AGAP3-222ENST00000490839 ZNF277Q9NRM2 450 aaPredicted RBP20.4■□□□□ 0.86
AGAP3-222ENST00000490839 TMEM88BA6NKF7 163 aa20.39■□□□□ 0.85
AGAP3-222ENST00000490839 MCM10Q7L590 875 aa20.39■□□□□ 0.85
AGAP3-222ENST00000490839 HACL1Q9UJ83 578 aa20.39■□□□□ 0.85
AGAP3-222ENST00000490839 NUDCQ9Y266 331 aa20.39■□□□□ 0.85
AGAP3-222ENST00000490839 NBPF26B4DH59 902 aa20.38■□□□□ 0.85
AGAP3-222ENST00000490839 FOXN1O15353 648 aa20.38■□□□□ 0.85
AGAP3-222ENST00000490839 NBPF10Q6P3W6 841 aaKnown RBP20.38■□□□□ 0.85
AGAP3-222ENST00000490839 NBPF15Q8N660 670 aa20.38■□□□□ 0.85
AGAP3-222ENST00000490839 PRDM10Q9NQV6 1147 aa20.38■□□□□ 0.85
AGAP3-222ENST00000490839 LAMB4A4D0S4 1761 aa20.38■□□□□ 0.85
AGAP3-222ENST00000490839 ITGBL1O95965 494 aaPredicted RBP20.37■□□□□ 0.85
AGAP3-222ENST00000490839 EAPPQ56P03 285 aaPredicted RBP20.37■□□□□ 0.85
AGAP3-222ENST00000490839 AIDAQ96BJ3 306 aa20.37■□□□□ 0.85
AGAP3-222ENST00000490839 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
AGAP3-222ENST00000490839 U2AF1L5P0DN76 240 aaPredicted RBP20.36■□□□□ 0.85
AGAP3-222ENST00000490839 ALDH1B1P30837 517 aa20.36■□□□□ 0.85
AGAP3-222ENST00000490839 EPHX2P34913 555 aa20.36■□□□□ 0.85
AGAP3-222ENST00000490839 U2AF1Q01081 240 aaKnown RBP eCLIP20.36■□□□□ 0.85
AGAP3-222ENST00000490839 OLFM4Q6UX06 510 aa20.36■□□□□ 0.85
AGAP3-222ENST00000490839 PNMA8AQ86V59 439 aaPredicted RBP20.36■□□□□ 0.85
AGAP3-222ENST00000490839 FZD9O00144 591 aa20.35■□□□□ 0.85
AGAP3-222ENST00000490839 IARSP41252 1262 aaKnown RBP20.35■□□□□ 0.85
AGAP3-222ENST00000490839 CTCFP49711 727 aaPredicted RBP20.35■□□□□ 0.85
AGAP3-222ENST00000490839 VEGFBP49765 207 aa20.35■□□□□ 0.85
AGAP3-222ENST00000490839 SNED1Q8TER0 1413 aa20.35■□□□□ 0.85
AGAP3-222ENST00000490839 RNF123Q5XPI4 1314 aa20.34■□□□□ 0.85
AGAP3-222ENST00000490839 FAM177BA6PVY3 158 aa20.34■□□□□ 0.85
AGAP3-222ENST00000490839 CLEC11AQ9Y240 323 aa20.34■□□□□ 0.85
AGAP3-222ENST00000490839 GTF2E1P29083 439 aaPredicted RBP20.33■□□□□ 0.85
AGAP3-222ENST00000490839 DCTN1Q14203 1278 aa20.33■□□□□ 0.85
AGAP3-222ENST00000490839 HLFQ16534 295 aa20.33■□□□□ 0.85
AGAP3-222ENST00000490839 CRY2Q49AN0 593 aa20.33■□□□□ 0.85
AGAP3-222ENST00000490839 GPC2Q8N158 579 aa20.33■□□□□ 0.85
AGAP3-222ENST00000490839 SYNE4Q8N205 404 aa20.33■□□□□ 0.85
AGAP3-222ENST00000490839 PSMD1Q99460 953 aa20.33■□□□□ 0.85
AGAP3-222ENST00000490839 NYXQ9GZU5 481 aa20.32■□□□□ 0.84
AGAP3-222ENST00000490839 ABCC12Q96J65 1359 aa20.32■□□□□ 0.84
AGAP3-222ENST00000490839 RIC1Q4ADV7 1423 aa20.31■□□□□ 0.84
AGAP3-222ENST00000490839 RASSF10A6NK89 507 aa20.31■□□□□ 0.84
AGAP3-222ENST00000490839 TAF7Q15545 349 aaPredicted RBP20.31■□□□□ 0.84
AGAP3-222ENST00000490839 CC2D2BQ6DHV5 1058 aa20.31■□□□□ 0.84
AGAP3-222ENST00000490839 CNTROBQ8N137 903 aa20.31■□□□□ 0.84
AGAP3-222ENST00000490839 JDP2Q8WYK2 163 aa20.31■□□□□ 0.84
AGAP3-222ENST00000490839 WBP1LQ9NX94 342 aa20.31■□□□□ 0.84
AGAP3-222ENST00000490839 NUP98P52948 1817 aa20.3■□□□□ 0.84
AGAP3-222ENST00000490839 PPP2R1AP30153 589 aa20.3■□□□□ 0.84
AGAP3-222ENST00000490839 MAP1SQ66K74 1059 aaPredicted RBP20.3■□□□□ 0.84
AGAP3-222ENST00000490839 IBTKQ9P2D0 1353 aaPredicted RBP20.3■□□□□ 0.84
AGAP3-222ENST00000490839 KDM3BQ7LBC6 1761 aa20.29■□□□□ 0.84
AGAP3-222ENST00000490839 ERVV-1B6SEH8 477 aa20.29■□□□□ 0.84
AGAP3-222ENST00000490839 DEFB115Q30KQ5 88 aa20.28■□□□□ 0.84
AGAP3-222ENST00000490839 COL4A5P29400 1685 aa20.28■□□□□ 0.84
AGAP3-222ENST00000490839 MAP3K15Q6ZN16 1313 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms