RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 SRGNP10124 158 aa20.83■□□□□ 0.93
COL2A1-207ENST00000490609 JMYQ8N9B5 988 aa20.83■□□□□ 0.93
COL2A1-207ENST00000490609 KLRG1Q96E93 195 aa20.83■□□□□ 0.93
COL2A1-207ENST00000490609 CFAP53Q96M91 514 aa20.83■□□□□ 0.93
COL2A1-207ENST00000490609 SETDB2Q96T68 719 aa20.83■□□□□ 0.93
COL2A1-207ENST00000490609 NUP98P52948 1817 aa20.83■□□□□ 0.92
COL2A1-207ENST00000490609 KDM3BQ7LBC6 1761 aa20.82■□□□□ 0.92
COL2A1-207ENST00000490609 C7orf43Q8WVR3 580 aa20.82■□□□□ 0.92
COL2A1-207ENST00000490609 PDZRN3Q9UPQ7 1066 aa20.82■□□□□ 0.92
COL2A1-207ENST00000490609 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
COL2A1-207ENST00000490609 VEGFAP15692 232 aaPredicted RBP20.81■□□□□ 0.92
COL2A1-207ENST00000490609 CNBD1Q8NA66 436 aa20.81■□□□□ 0.92
COL2A1-207ENST00000490609 MIS18AQ9NYP9 233 aa20.81■□□□□ 0.92
COL2A1-207ENST00000490609 LAMB4A4D0S4 1761 aa20.81■□□□□ 0.92
COL2A1-207ENST00000490609 KLRG2A4D1S0 409 aaPredicted RBP20.8■□□□□ 0.92
COL2A1-207ENST00000490609 CLEC4GQ6UXB4 293 aa20.8■□□□□ 0.92
COL2A1-207ENST00000490609 SMC1BQ8NDV3 1235 aa20.8■□□□□ 0.92
COL2A1-207ENST00000490609 NUDCQ9Y266 331 aa20.8■□□□□ 0.92
COL2A1-207ENST00000490609 LTBP3Q9NS15 1303 aa20.79■□□□□ 0.92
COL2A1-207ENST00000490609 HTATSF1O43719 755 aaKnown RBP20.79■□□□□ 0.92
COL2A1-207ENST00000490609 STYK1Q6J9G0 422 aa20.79■□□□□ 0.92
COL2A1-207ENST00000490609 PRPF40BQ6NWY9 871 aaKnown RBP20.79■□□□□ 0.92
COL2A1-207ENST00000490609 HLFQ16534 295 aa20.78■□□□□ 0.92
COL2A1-207ENST00000490609 PLEKHF1Q96S99 279 aa20.78■□□□□ 0.92
COL2A1-207ENST00000490609 TAF7Q15545 349 aaPredicted RBP20.77■□□□□ 0.92
COL2A1-207ENST00000490609 CNKSR1Q969H4 720 aa20.77■□□□□ 0.92
COL2A1-207ENST00000490609 MASTLQ96GX5 879 aa20.77■□□□□ 0.92
COL2A1-207ENST00000490609 ERFEQ4G0M1 354 aa20.76■□□□□ 0.91
COL2A1-207ENST00000490609 OLFM4Q6UX06 510 aa20.76■□□□□ 0.91
COL2A1-207ENST00000490609 RTF1Q92541 710 aaKnown RBP20.76■□□□□ 0.91
COL2A1-207ENST00000490609 POTEIP0CG38 1075 aa20.75■□□□□ 0.91
COL2A1-207ENST00000490609 POTEJP0CG39 1038 aa20.75■□□□□ 0.91
COL2A1-207ENST00000490609 ST5P78524 1137 aa20.74■□□□□ 0.91
COL2A1-207ENST00000490609 NBPF5PQ86XG9 351 aaPredicted RBP20.74■□□□□ 0.91
COL2A1-207ENST00000490609 TAOK3Q9H2K8 898 aa20.74■□□□□ 0.91
COL2A1-207ENST00000490609 SNED1Q8TER0 1413 aa20.73■□□□□ 0.91
COL2A1-207ENST00000490609 RGL2O15211 777 aa20.73■□□□□ 0.91
COL2A1-207ENST00000490609 DDNO94850 711 aaPredicted RBP20.73■□□□□ 0.91
COL2A1-207ENST00000490609 SCN4AP35499 1836 aa20.73■□□□□ 0.91
COL2A1-207ENST00000490609 COL13A1Q5TAT6 717 aaPredicted RBP20.72■□□□□ 0.91
COL2A1-207ENST00000490609 THUMPD2Q9BTF0 503 aaKnown RBP20.72■□□□□ 0.91
COL2A1-207ENST00000490609 NIP7Q9Y221 180 aaKnown RBP eCLIP20.72■□□□□ 0.91
COL2A1-207ENST00000490609 DPY19L2Q6NUT2 758 aa20.71■□□□□ 0.91
COL2A1-207ENST00000490609 NPM2Q86SE8 214 aaKnown RBP20.71■□□□□ 0.91
COL2A1-207ENST00000490609 NPR1P16066 1061 aa20.7■□□□□ 0.9
COL2A1-207ENST00000490609 EIF4A1P60842 406 aaKnown RBP20.7■□□□□ 0.9
COL2A1-207ENST00000490609 FAM177BA6PVY3 158 aa20.69■□□□□ 0.9
COL2A1-207ENST00000490609 TPTE2Q6XPS3 522 aa20.69■□□□□ 0.9
COL2A1-207ENST00000490609 TTLL7Q6ZT98 887 aa20.69■□□□□ 0.9
COL2A1-207ENST00000490609 ZNF652Q9Y2D9 606 aa20.69■□□□□ 0.9
COL2A1-207ENST00000490609 ADAMTSL1Q8N6G6 1762 aa20.68■□□□□ 0.9
COL2A1-207ENST00000490609 SLC51AQ86UW1 340 aa20.68■□□□□ 0.9
COL2A1-207ENST00000490609 ABCC12Q96J65 1359 aa20.68■□□□□ 0.9
COL2A1-207ENST00000490609 COL4A5P29400 1685 aa20.67■□□□□ 0.9
COL2A1-207ENST00000490609 NPHP1O15259 732 aa20.67■□□□□ 0.9
COL2A1-207ENST00000490609 NFE2L2Q16236 605 aa20.67■□□□□ 0.9
COL2A1-207ENST00000490609 CRY2Q49AN0 593 aa20.66■□□□□ 0.9
COL2A1-207ENST00000490609 SOGA3Q5TF21 947 aa20.66■□□□□ 0.9
COL2A1-207ENST00000490609 LRP10Q7Z4F1 713 aa20.66■□□□□ 0.9
COL2A1-207ENST00000490609 NGEFQ8N5V2 710 aa20.66■□□□□ 0.9
COL2A1-207ENST00000490609 L3MBTL3Q96JM7 780 aaPredicted RBP20.66■□□□□ 0.9
COL2A1-207ENST00000490609 ZNF277Q9NRM2 450 aaPredicted RBP20.66■□□□□ 0.9
COL2A1-207ENST00000490609 ZNF541Q9H0D2 1346 aa20.66■□□□□ 0.9
COL2A1-207ENST00000490609 UBN2Q6ZU65 1347 aa20.65■□□□□ 0.9
COL2A1-207ENST00000490609 ERVV-1B6SEH8 477 aa20.65■□□□□ 0.9
COL2A1-207ENST00000490609 FKBP4Q02790 459 aaKnown RBP eCLIP20.65■□□□□ 0.9
COL2A1-207ENST00000490609 CCDC93Q567U6 631 aa20.65■□□□□ 0.9
COL2A1-207ENST00000490609 CHADLQ6NUI6 762 aa20.65■□□□□ 0.9
COL2A1-207ENST00000490609 NUTM1Q86Y26 1132 aa20.65■□□□□ 0.9
COL2A1-207ENST00000490609 MAP3K15Q6ZN16 1313 aa20.64■□□□□ 0.89
COL2A1-207ENST00000490609 RRP7AQ9Y3A4 280 aaKnown RBP20.64■□□□□ 0.89
COL2A1-207ENST00000490609 PASKQ96RG2 1323 aa20.63■□□□□ 0.89
COL2A1-207ENST00000490609 TAF1DQ9H5J8 278 aaPredicted RBP20.63■□□□□ 0.89
COL2A1-207ENST00000490609 LTBP1Q14766 1721 aa20.62■□□□□ 0.89
COL2A1-207ENST00000490609 PDIA6Q15084 440 aa20.62■□□□□ 0.89
COL2A1-207ENST00000490609 SUSD4Q5VX71 490 aa20.62■□□□□ 0.89
COL2A1-207ENST00000490609 C3orf67Q6ZVT6 689 aa20.62■□□□□ 0.89
COL2A1-207ENST00000490609 ZNF34Q8IZ26 560 aa20.62■□□□□ 0.89
COL2A1-207ENST00000490609 PNISRQ8TF01 805 aaKnown RBP20.62■□□□□ 0.89
COL2A1-207ENST00000490609 LAMB2P55268 1798 aa20.62■□□□□ 0.89
COL2A1-207ENST00000490609 FZD9O00144 591 aa20.61■□□□□ 0.89
COL2A1-207ENST00000490609 ITGBL1O95965 494 aaPredicted RBP20.61■□□□□ 0.89
COL2A1-207ENST00000490609 MYL6BP14649 208 aa20.61■□□□□ 0.89
COL2A1-207ENST00000490609 SYNE4Q8N205 404 aa20.61■□□□□ 0.89
COL2A1-207ENST00000490609 ALDH1B1P30837 517 aa20.6■□□□□ 0.89
COL2A1-207ENST00000490609 HOXA10P31260 410 aaPredicted RBP20.6■□□□□ 0.89
COL2A1-207ENST00000490609 RTKN2Q8IZC4 609 aa20.6■□□□□ 0.89
COL2A1-207ENST00000490609 TAF1P21675 1872 aa20.6■□□□□ 0.89
COL2A1-207ENST00000490609 RIC1Q4ADV7 1423 aa20.6■□□□□ 0.89
COL2A1-207ENST00000490609 HSPA1AP0DMV8 641 aaKnown RBP20.59■□□□□ 0.89
COL2A1-207ENST00000490609 HSPA1BP0DMV9 641 aaKnown RBP20.59■□□□□ 0.89
COL2A1-207ENST00000490609 GPTP24298 496 aa20.59■□□□□ 0.89
COL2A1-207ENST00000490609 IARSP41252 1262 aaKnown RBP20.59■□□□□ 0.89
COL2A1-207ENST00000490609 PROSER3Q2NL68 480 aa20.59■□□□□ 0.89
COL2A1-207ENST00000490609 ZBTB3Q9H5J0 574 aa20.59■□□□□ 0.89
COL2A1-207ENST00000490609 CREBZFQ9NS37 354 aa20.59■□□□□ 0.89
COL2A1-207ENST00000490609 NTSR2O95665 410 aa20.58■□□□□ 0.89
COL2A1-207ENST00000490609 PSMD1Q99460 953 aa20.58■□□□□ 0.89
COL2A1-207ENST00000490609 ANKRD36CQ5JPF3 1778 aa20.58■□□□□ 0.89
COL2A1-207ENST00000490609 IBTKQ9P2D0 1353 aaPredicted RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms