RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 MAP3K15Q6ZN16 1313 aa16.78■□□□□ 0.28
SNX12-205ENST00000490561 PI4KAP2A4QPH2 592 aa16.78■□□□□ 0.28
SNX12-205ENST00000490561 NEXNQ0ZGT2 675 aa16.78■□□□□ 0.28
SNX12-205ENST00000490561 HSP90AB3PQ58FF7 597 aa16.78■□□□□ 0.28
SNX12-205ENST00000490561 DZIP3Q86Y13 1208 aaKnown RBP16.78■□□□□ 0.28
SNX12-205ENST00000490561 PI4KAP1Q8N8J0 262 aa16.78■□□□□ 0.28
SNX12-205ENST00000490561 UPF1Q92900 1129 aaKnown RBP eCLIP16.78■□□□□ 0.289e-9■■■■■ 38.4
SNX12-205ENST00000490561 ATP10DQ9P241 1426 aa16.78■□□□□ 0.28
SNX12-205ENST00000490561 ADCY9O60503 1353 aa16.77■□□□□ 0.28
SNX12-205ENST00000490561 IBTKQ9P2D0 1353 aaPredicted RBP16.77■□□□□ 0.28
SNX12-205ENST00000490561 MYH14Q7Z406 1995 aaKnown RBP16.77■□□□□ 0.28
SNX12-205ENST00000490561 TRAPPC3LQ5T215 181 aa16.77■□□□□ 0.28
SNX12-205ENST00000490561 TTLL7Q6ZT98 887 aa16.77■□□□□ 0.28
SNX12-205ENST00000490561 AKT1S1Q96B36 256 aa16.77■□□□□ 0.28
SNX12-205ENST00000490561 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.28
SNX12-205ENST00000490561 MAP3K2Q9Y2U5 619 aa16.77■□□□□ 0.28
SNX12-205ENST00000490561 AAMPQ13685 434 aa16.76■□□□□ 0.27
SNX12-205ENST00000490561 INTS3Q68E01 1043 aaKnown RBP16.76■□□□□ 0.27
SNX12-205ENST00000490561 CLUAP1Q96AJ1 413 aa16.76■□□□□ 0.27
SNX12-205ENST00000490561 ARXQ96QS3 562 aa16.76■□□□□ 0.27
SNX12-205ENST00000490561 METTL22Q9BUU2 404 aaPredicted RBP16.76■□□□□ 0.27
SNX12-205ENST00000490561 STK32BQ9NY57 414 aa16.76■□□□□ 0.27
SNX12-205ENST00000490561 F6X3S4 739 aa16.75■□□□□ 0.27
SNX12-205ENST00000490561 ALDH1L1O75891 902 aa16.75■□□□□ 0.27
SNX12-205ENST00000490561 ERICH6BQ5W0A0 696 aa16.75■□□□□ 0.27
SNX12-205ENST00000490561 SLC4A10Q6U841 1118 aa16.75■□□□□ 0.27
SNX12-205ENST00000490561 CLEC4GQ6UXB4 293 aa16.75■□□□□ 0.27
SNX12-205ENST00000490561 DEFB132Q7Z7B7 95 aa16.75■□□□□ 0.27
SNX12-205ENST00000490561 PANK1Q8TE04 598 aa16.75■□□□□ 0.27
SNX12-205ENST00000490561 SRCIN1Q9C0H9 1055 aa16.75■□□□□ 0.27
SNX12-205ENST00000490561 TFCP2L1Q9NZI6 479 aa16.75■□□□□ 0.27
SNX12-205ENST00000490561 NARFQ9UHQ1 456 aa16.75■□□□□ 0.27
SNX12-205ENST00000490561 DDX19BQ9UMR2 479 aa16.75■□□□□ 0.27
SNX12-205ENST00000490561 ZPR1O75312 459 aa16.74■□□□□ 0.27
SNX12-205ENST00000490561 RFC4P35249 363 aa16.74■□□□□ 0.27
SNX12-205ENST00000490561 MVPQ14764 893 aaKnown RBP16.74■□□□□ 0.27
SNX12-205ENST00000490561 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
SNX12-205ENST00000490561 ITPRIPQ8IWB1 547 aa16.74■□□□□ 0.27
SNX12-205ENST00000490561 TMEM57Q8N5G2 664 aa16.74■□□□□ 0.27
SNX12-205ENST00000490561 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
SNX12-205ENST00000490561 ZBTB3Q9H5J0 574 aa16.74■□□□□ 0.27
SNX12-205ENST00000490561 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
SNX12-205ENST00000490561 UBR3Q6ZT12 1888 aa16.73■□□□□ 0.27
SNX12-205ENST00000490561 NUP188Q5SRE5 1749 aa16.73■□□□□ 0.27
SNX12-205ENST00000490561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.73■□□□□ 0.27
SNX12-205ENST00000490561 CAMTA2O94983 1202 aa16.73■□□□□ 0.27
SNX12-205ENST00000490561 BEND3Q5T5X7 828 aa16.73■□□□□ 0.27
SNX12-205ENST00000490561 C20orf194Q5TEA3 1177 aa16.73■□□□□ 0.27
SNX12-205ENST00000490561 TBC1D2BQ9UPU7 963 aa16.73■□□□□ 0.27
SNX12-205ENST00000490561 ARFGEF2Q9Y6D5 1785 aa16.73■□□□□ 0.27
SNX12-205ENST00000490561 RLBP1P12271 317 aa16.72■□□□□ 0.27
SNX12-205ENST00000490561 TCIRG1Q13488 830 aa16.72■□□□□ 0.27
SNX12-205ENST00000490561 SLC15A2Q16348 729 aa16.72■□□□□ 0.27
SNX12-205ENST00000490561 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
SNX12-205ENST00000490561 ARHGEF1Q92888 912 aaKnown RBP16.72■□□□□ 0.27
SNX12-205ENST00000490561 MYD88Q99836 296 aa16.72■□□□□ 0.27
SNX12-205ENST00000490561 TNNQ9UQP3 1299 aa16.72■□□□□ 0.27
SNX12-205ENST00000490561 SCN7AQ01118 1682 aa16.72■□□□□ 0.27
SNX12-205ENST00000490561 BCORQ6W2J9 1755 aa16.72■□□□□ 0.27
SNX12-205ENST00000490561 PHF14O94880 888 aa16.71■□□□□ 0.27
SNX12-205ENST00000490561 TRIM28Q13263 835 aaKnown RBP16.71■□□□□ 0.27
SNX12-205ENST00000490561 HDAC5Q9UQL6 1122 aa16.71■□□□□ 0.27
SNX12-205ENST00000490561 COG6Q9Y2V7 657 aa16.71■□□□□ 0.27
SNX12-205ENST00000490561 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
SNX12-205ENST00000490561 QSER1Q2KHR3 1735 aa16.7■□□□□ 0.26
SNX12-205ENST00000490561 CCDC191Q8NCU4 936 aa16.7■□□□□ 0.26
SNX12-205ENST00000490561 CRBNQ96SW2 442 aa16.7■□□□□ 0.26
SNX12-205ENST00000490561 GNAI3P08754 354 aa16.69■□□□□ 0.26
SNX12-205ENST00000490561 PARP10Q53GL7 1025 aa16.69■□□□□ 0.26
SNX12-205ENST00000490561 ISCA1Q9BUE6 129 aa16.69■□□□□ 0.26
SNX12-205ENST00000490561 CWC25Q9NXE8 425 aaPredicted RBP16.69■□□□□ 0.26
SNX12-205ENST00000490561 C4AP0C0L4 1744 aa16.68■□□□□ 0.26
SNX12-205ENST00000490561 NEURL1BA8MQ27 555 aa16.68■□□□□ 0.26
SNX12-205ENST00000490561 IGKV5-2P06315 115 aa16.68■□□□□ 0.26
SNX12-205ENST00000490561 HLFQ16534 295 aa16.68■□□□□ 0.26
SNX12-205ENST00000490561 USPL1Q5W0Q7 1092 aa16.68■□□□□ 0.26
SNX12-205ENST00000490561 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
SNX12-205ENST00000490561 ANKRD36CQ5JPF3 1778 aa16.67■□□□□ 0.26
SNX12-205ENST00000490561 IRX6P78412 446 aaPredicted RBP16.67■□□□□ 0.26
SNX12-205ENST00000490561 FKBP8Q14318 412 aa16.67■□□□□ 0.26
SNX12-205ENST00000490561 ZNF34Q8IZ26 560 aa16.67■□□□□ 0.26
SNX12-205ENST00000490561 C9orf78Q9NZ63 289 aaPredicted RBP16.67■□□□□ 0.26
SNX12-205ENST00000490561 PNPLA7Q6ZV29 1317 aa16.67■□□□□ 0.26
SNX12-205ENST00000490561 ZBTB7BO15156 539 aaPredicted RBP16.66■□□□□ 0.26
SNX12-205ENST00000490561 GCKRQ14397 625 aa16.66■□□□□ 0.26
SNX12-205ENST00000490561 AMIGO3Q86WK7 504 aa16.66■□□□□ 0.26
SNX12-205ENST00000490561 SRP68Q9UHB9 627 aaKnown RBP16.66■□□□□ 0.26
SNX12-205ENST00000490561 NUP98P52948 1817 aa16.66■□□□□ 0.26
SNX12-205ENST00000490561 ATP5J2-PTCD1G3V325 749 aa16.65■□□□□ 0.26
SNX12-205ENST00000490561 GRM8O00222 908 aa16.65■□□□□ 0.26
SNX12-205ENST00000490561 MSH5O43196 834 aa16.65■□□□□ 0.26
SNX12-205ENST00000490561 HSP90B1P14625 803 aaKnown RBP16.65■□□□□ 0.26
SNX12-205ENST00000490561 CWF19L2Q2TBE0 894 aaKnown RBP16.65■□□□□ 0.26
SNX12-205ENST00000490561 PPP1R42Q7Z4L9 355 aa16.65■□□□□ 0.26
SNX12-205ENST00000490561 NLRP10Q86W26 655 aa16.65■□□□□ 0.26
SNX12-205ENST00000490561 COL23A1Q86Y22 540 aaPredicted RBP16.65■□□□□ 0.26
SNX12-205ENST00000490561 NLGN1Q8N2Q7 840 aa16.65■□□□□ 0.26
SNX12-205ENST00000490561 EXOC6Q8TAG9 804 aa16.65■□□□□ 0.26
SNX12-205ENST00000490561 BCL2L12Q9HB09 334 aa16.65■□□□□ 0.26
SNX12-205ENST00000490561 NIP7Q9Y221 180 aaKnown RBP eCLIP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms