RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 FIGNL1Q6PIW4 674 aa8.91□□□□□ -0.98
HMGB1P38-201ENST00000490557 NPAS3Q8IXF0 933 aa8.91□□□□□ -0.98
HMGB1P38-201ENST00000490557 GTF3C2Q8WUA4 911 aaPredicted RBP8.91□□□□□ -0.98
HMGB1P38-201ENST00000490557 MYO19Q96H55 970 aa8.91□□□□□ -0.98
HMGB1P38-201ENST00000490557 KLK14Q9P0G3 267 aa8.91□□□□□ -0.98
HMGB1P38-201ENST00000490557 COX20Q5RI15 118 aa8.9□□□□□ -0.98
HMGB1P38-201ENST00000490557 SV2AQ7L0J3 742 aa8.9□□□□□ -0.98
HMGB1P38-201ENST00000490557 NLRP8Q86W28 1048 aa8.9□□□□□ -0.98
HMGB1P38-201ENST00000490557 VWA5B2Q8N398 1253 aa8.9□□□□□ -0.98
HMGB1P38-201ENST00000490557 SUSD3Q96L08 255 aa8.9□□□□□ -0.98
HMGB1P38-201ENST00000490557 TRERF1Q96PN7 1200 aa8.9□□□□□ -0.98
HMGB1P38-201ENST00000490557 BRD2P25440 801 aaKnown RBP8.89□□□□□ -0.99
HMGB1P38-201ENST00000490557 DBN1Q16643 649 aa8.89□□□□□ -0.99
HMGB1P38-201ENST00000490557 ZNF837Q96EG3 531 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P38-201ENST00000490557 HSH2DQ96JZ2 352 aa8.89□□□□□ -0.99
HMGB1P38-201ENST00000490557 SAP130Q9H0E3 1048 aa8.89□□□□□ -0.99
HMGB1P38-201ENST00000490557 TERTO14746 1132 aaKnown RBP8.88□□□□□ -0.99
HMGB1P38-201ENST00000490557 HELQQ8TDG4 1101 aa8.88□□□□□ -0.99
HMGB1P38-201ENST00000490557 GTPBP3Q969Y2 492 aaKnown RBP8.88□□□□□ -0.99
HMGB1P38-201ENST00000490557 IFT43Q96FT9 208 aa8.88□□□□□ -0.99
HMGB1P38-201ENST00000490557 CUEDC1Q9NWM3 386 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P38-201ENST00000490557 PHF24Q9UPV7 400 aa8.88□□□□□ -0.99
HMGB1P38-201ENST00000490557 H3BM21 787 aa8.87□□□□□ -0.99
HMGB1P38-201ENST00000490557 ATXN7O15265 892 aaPredicted RBP8.87□□□□□ -0.99
HMGB1P38-201ENST00000490557 SERPINB4P48594 390 aa8.87□□□□□ -0.99
HMGB1P38-201ENST00000490557 ABTB2Q8N961 1025 aa8.87□□□□□ -0.99
HMGB1P38-201ENST00000490557 CEP63Q96MT8 703 aa8.87□□□□□ -0.99
HMGB1P38-201ENST00000490557 STIM2Q9P246 746 aa8.87□□□□□ -0.99
HMGB1P38-201ENST00000490557 LRFN2Q9ULH4 789 aa8.87□□□□□ -0.99
HMGB1P38-201ENST00000490557 ZBTB7CA1YPR0 619 aa8.86□□□□□ -0.99
HMGB1P38-201ENST00000490557 TGFBR3LH3BV60 316 aa8.86□□□□□ -0.99
HMGB1P38-201ENST00000490557 ZNF211Q13398 564 aaPredicted RBP8.86□□□□□ -0.99
HMGB1P38-201ENST00000490557 SF3B2Q13435 895 aaKnown RBP8.86□□□□□ -0.99
HMGB1P38-201ENST00000490557 TXNDC2Q86VQ3 553 aa8.86□□□□□ -0.99
HMGB1P38-201ENST00000490557 ZNF280CQ8ND82 737 aa8.86□□□□□ -0.99
HMGB1P38-201ENST00000490557 ZCCHC2Q9C0B9 1178 aaKnown RBP8.86□□□□□ -0.99
HMGB1P38-201ENST00000490557 ANO2Q9NQ90 1003 aa8.86□□□□□ -0.99
HMGB1P38-201ENST00000490557 PCDHGC4Q9Y5F7 938 aa8.86□□□□□ -0.99
HMGB1P38-201ENST00000490557 IVNS1ABPQ9Y6Y0 642 aa8.86□□□□□ -0.99
HMGB1P38-201ENST00000490557 H3BRB1 525 aa8.85□□□□□ -0.99
HMGB1P38-201ENST00000490557 KHNYNO15037 678 aaKnown RBP8.85□□□□□ -0.99
HMGB1P38-201ENST00000490557 FKBP4Q02790 459 aaKnown RBP eCLIP8.85□□□□□ -0.99
HMGB1P38-201ENST00000490557 AAMPQ13685 434 aa8.85□□□□□ -0.99
HMGB1P38-201ENST00000490557 GLYCTKQ8IVS8 523 aa8.85□□□□□ -0.99
HMGB1P38-201ENST00000490557 NANOS1Q8WY41 292 aaKnown RBP8.85□□□□□ -0.99
HMGB1P38-201ENST00000490557 IRF7Q92985 503 aa8.85□□□□□ -0.99
HMGB1P38-201ENST00000490557 TUT1Q9H6E5 874 aaKnown RBP8.85□□□□□ -0.99
HMGB1P38-201ENST00000490557 EGFL7Q9UHF1 273 aa8.85□□□□□ -0.99
HMGB1P38-201ENST00000490557 GNEQ9Y223 722 aaKnown RBP8.85□□□□□ -0.99
HMGB1P38-201ENST00000490557 DNMT3AQ9Y6K1 912 aaPredicted RBP8.85□□□□□ -0.99
HMGB1P38-201ENST00000490557 DCDC2BA2VCK2 349 aa8.84□□□□□ -0.99
HMGB1P38-201ENST00000490557 EPB42P16452 691 aa8.84□□□□□ -0.99
HMGB1P38-201ENST00000490557 MTMR3Q13615 1198 aa8.84□□□□□ -0.99
HMGB1P38-201ENST00000490557 IER5Q5VY09 327 aa8.84□□□□□ -0.99
HMGB1P38-201ENST00000490557 BTLAQ7Z6A9 289 aa8.84□□□□□ -0.99
HMGB1P38-201ENST00000490557 C7orf43Q8WVR3 580 aa8.84□□□□□ -0.99
HMGB1P38-201ENST00000490557 GPR25O00155 361 aa8.83□□□□□ -1
HMGB1P38-201ENST00000490557 MICAL2O94851 1124 aa8.83□□□□□ -1
HMGB1P38-201ENST00000490557 FAM13AO94988 1023 aa8.83□□□□□ -1
HMGB1P38-201ENST00000490557 SAMD5Q5TGI4 173 aa8.83□□□□□ -1
HMGB1P38-201ENST00000490557 TREML1Q86YW5 311 aa8.83□□□□□ -1
HMGB1P38-201ENST00000490557 TNFRSF10BO14763 440 aa8.82□□□□□ -1
HMGB1P38-201ENST00000490557 FAM157BP0CG42 384 aa8.82□□□□□ -1
HMGB1P38-201ENST00000490557 IDH3AP50213 366 aa8.82□□□□□ -1
HMGB1P38-201ENST00000490557 ALKBH2Q6NS38 261 aa8.82□□□□□ -1
HMGB1P38-201ENST00000490557 KLRG1Q96E93 195 aa8.82□□□□□ -1
HMGB1P38-201ENST00000490557 ABHD17AQ96GS6 310 aa8.82□□□□□ -1
HMGB1P38-201ENST00000490557 BRD7Q9NPI1 651 aa8.82□□□□□ -1
HMGB1P38-201ENST00000490557 FAM13BQ9NYF5 915 aa8.82□□□□□ -1
HMGB1P38-201ENST00000490557 BIN2Q9UBW5 565 aaPredicted RBP8.82□□□□□ -1
HMGB1P38-201ENST00000490557 ATXN7L1Q9ULK2 861 aaPredicted RBP8.82□□□□□ -1
HMGB1P38-201ENST00000490557 BCS1LQ9Y276 419 aa8.82□□□□□ -1
HMGB1P38-201ENST00000490557 ICMTO60725 284 aa8.81□□□□□ -1
HMGB1P38-201ENST00000490557 MPSTP25325 297 aa8.81□□□□□ -1
HMGB1P38-201ENST00000490557 ARSDP51689 593 aa8.81□□□□□ -1
HMGB1P38-201ENST00000490557 NOM1Q5C9Z4 860 aaKnown RBP8.81□□□□□ -1
HMGB1P38-201ENST00000490557 CFHR5Q9BXR6 569 aa8.81□□□□□ -1
HMGB1P38-201ENST00000490557 BNIP3LO60238 219 aa8.8□□□□□ -1
HMGB1P38-201ENST00000490557 THBS1P07996 1170 aa8.8□□□□□ -1
HMGB1P38-201ENST00000490557 MAPTP10636 758 aaKnown RBP8.8□□□□□ -1
HMGB1P38-201ENST00000490557 ZAP70P43403 619 aa8.8□□□□□ -1
HMGB1P38-201ENST00000490557 TYRO3Q06418 890 aa8.8□□□□□ -1
HMGB1P38-201ENST00000490557 ETFBKMTQ8IXQ9 262 aa8.8□□□□□ -1
HMGB1P38-201ENST00000490557 TTC16Q8NEE8 873 aa8.8□□□□□ -1
HMGB1P38-201ENST00000490557 NSFL1CQ9UNZ2 370 aaKnown RBP8.8□□□□□ -1
HMGB1P38-201ENST00000490557 SOWAHDA6NJG2 315 aa8.79□□□□□ -1
HMGB1P38-201ENST00000490557 WFS1O76024 890 aa8.79□□□□□ -1
HMGB1P38-201ENST00000490557 VSIG8P0DPA2 414 aa8.79□□□□□ -1
HMGB1P38-201ENST00000490557 PCSK2P16519 638 aa8.79□□□□□ -1
HMGB1P38-201ENST00000490557 FGFR3P22607 806 aa8.79□□□□□ -1
HMGB1P38-201ENST00000490557 TNP2Q05952 138 aa8.79□□□□□ -1
HMGB1P38-201ENST00000490557 LAMC2Q13753 1193 aa8.79□□□□□ -1
HMGB1P38-201ENST00000490557 RGL4Q8IZJ4 473 aa8.79□□□□□ -1
HMGB1P38-201ENST00000490557 ZNF775Q96BV0 537 aaPredicted RBP8.79□□□□□ -1
HMGB1P38-201ENST00000490557 MARK1Q9P0L2 795 aa8.79□□□□□ -1
HMGB1P38-201ENST00000490557 MX2P20592 715 aa8.78□□□□□ -1
HMGB1P38-201ENST00000490557 EIF1AXP47813 144 aaKnown RBP8.78□□□□□ -1
HMGB1P38-201ENST00000490557 NFX1Q12986 1120 aaKnown RBP8.78□□□□□ -1
HMGB1P38-201ENST00000490557 UBAP2LQ14157 1087 aaKnown RBP8.78□□□□□ -1
HMGB1P38-201ENST00000490557 PIK3R5Q8WYR1 880 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms