RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 ITPKCQ96DU7 683 aa7.94□□□□□ -1.14
SSX2IP-208ENST00000490476 NGLY1Q96IV0 654 aa7.94□□□□□ -1.14
SSX2IP-208ENST00000490476 SAP130Q9H0E3 1048 aa7.94□□□□□ -1.14
SSX2IP-208ENST00000490476 ZFAND3Q9H8U3 227 aa7.94□□□□□ -1.14
SSX2IP-208ENST00000490476 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.94□□□□□ -1.14
SSX2IP-208ENST00000490476 PKD2L1Q9P0L9 805 aa7.94□□□□□ -1.14
SSX2IP-208ENST00000490476 USP3Q9Y6I4 520 aa7.94□□□□□ -1.14
SSX2IP-208ENST00000490476 ABCC2Q92887 1545 aa7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 TTC37Q6PGP7 1564 aa7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 J3QL48 77 aa7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 ERCC3P19447 782 aa7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 WDR4P57081 412 aaKnown RBP7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 FOXK2Q01167 660 aa7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 AAMPQ13685 434 aa7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 NLRP3Q96P20 1036 aa7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 ESYT1Q9BSJ8 1104 aa7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 BCL2L13Q9BXK5 485 aa7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 ZNF232Q9UNY5 417 aa7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 CHMP3Q9Y3E7 222 aa7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 RUSC2Q8N2Y8 1516 aa7.93□□□□□ -1.14
SSX2IP-208ENST00000490476 TNFRSF10AO00220 468 aa7.92□□□□□ -1.14
SSX2IP-208ENST00000490476 GDF9O60383 454 aa7.92□□□□□ -1.14
SSX2IP-208ENST00000490476 MPSTP25325 297 aa7.92□□□□□ -1.14
SSX2IP-208ENST00000490476 C16orf46Q6P387 395 aa7.92□□□□□ -1.14
SSX2IP-208ENST00000490476 C2orf49Q9BVC5 232 aaPredicted RBP7.92□□□□□ -1.14
SSX2IP-208ENST00000490476 ZNF395Q9H8N7 513 aaPredicted RBP7.92□□□□□ -1.14
SSX2IP-208ENST00000490476 UNCXA6NJT0 531 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 CDK2AP1O14519 115 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 FAM13AO94988 1023 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 PTGIRP43119 386 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 PSMA6P60900 246 aaKnown RBP7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 ARHGAP4P98171 946 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 CENPCQ03188 943 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 MTFR1Q15390 333 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 ECM1Q16610 540 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 CYP4X1Q8N118 509 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 KDF1Q8NAX2 398 aaPredicted RBP7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 GIPC2Q8TF65 315 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 CABP1Q9NZU7 370 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 DCTN4Q9UJW0 460 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 PARP3Q9Y6F1 533 aa7.91□□□□□ -1.14
SSX2IP-208ENST00000490476 ARID4BQ4LE39 1312 aaPredicted RBP7.9□□□□□ -1.14
SSX2IP-208ENST00000490476 RBM47A0AV96 593 aaKnown RBP7.9□□□□□ -1.14
SSX2IP-208ENST00000490476 CLN3Q13286 438 aa7.9□□□□□ -1.14
SSX2IP-208ENST00000490476 COX20Q5RI15 118 aa7.9□□□□□ -1.14
SSX2IP-208ENST00000490476 POTEAQ6S8J7 498 aa7.9□□□□□ -1.14
SSX2IP-208ENST00000490476 HCN4Q9Y3Q4 1203 aa7.9□□□□□ -1.14
SSX2IP-208ENST00000490476 KIAA0556O60303 1618 aa7.89□□□□□ -1.15
SSX2IP-208ENST00000490476 TOP2AP11388 1531 aaKnown RBP7.89□□□□□ -1.15
SSX2IP-208ENST00000490476 SERTM1A2A2V5 107 aa7.89□□□□□ -1.15
SSX2IP-208ENST00000490476 PIP4K2BP78356 416 aa7.89□□□□□ -1.15
SSX2IP-208ENST00000490476 PKDCCQ504Y2 493 aa7.89□□□□□ -1.15
SSX2IP-208ENST00000490476 SH3PXD2AQ5TCZ1 1133 aa7.89□□□□□ -1.15
SSX2IP-208ENST00000490476 ZSCAN29Q8IWY8 852 aaPredicted RBP7.89□□□□□ -1.15
SSX2IP-208ENST00000490476 TMC1Q8TDI8 760 aa7.89□□□□□ -1.15
SSX2IP-208ENST00000490476 SETD1BQ9UPS6 1966 aaKnown RBP7.89□□□□□ -1.15
SSX2IP-208ENST00000490476 MAGI3Q5TCQ9 1506 aa7.88□□□□□ -1.15
SSX2IP-208ENST00000490476 GTF2E1P29083 439 aaPredicted RBP7.88□□□□□ -1.15
SSX2IP-208ENST00000490476 TMEM214Q6NUQ4 689 aaKnown RBP7.88□□□□□ -1.15
SSX2IP-208ENST00000490476 Q6ZVU0 165 aa7.88□□□□□ -1.15
SSX2IP-208ENST00000490476 NPAS4Q8IUM7 802 aa7.88□□□□□ -1.15
SSX2IP-208ENST00000490476 STAG2Q8N3U4 1231 aa7.88□□□□□ -1.15
SSX2IP-208ENST00000490476 NBPF15Q8N660 670 aa7.88□□□□□ -1.15
SSX2IP-208ENST00000490476 ZSCAN10Q96SZ4 725 aaPredicted RBP7.88□□□□□ -1.15
SSX2IP-208ENST00000490476 QTRT2Q9H974 415 aaKnown RBP7.88□□□□□ -1.15
SSX2IP-208ENST00000490476 IQSEC3Q9UPP2 1182 aaPredicted RBP7.88□□□□□ -1.15
SSX2IP-208ENST00000490476 TIMP2P16035 220 aa7.87□□□□□ -1.15
SSX2IP-208ENST00000490476 ZNF16P17020 682 aaPredicted RBP7.87□□□□□ -1.15
SSX2IP-208ENST00000490476 NOS2P35228 1153 aa7.87□□□□□ -1.15
SSX2IP-208ENST00000490476 ZNF787Q6DD87 383 aa7.87□□□□□ -1.15
SSX2IP-208ENST00000490476 L3MBTL2Q969R5 705 aa7.87□□□□□ -1.15
SSX2IP-208ENST00000490476 ASB16Q96NS5 453 aa7.87□□□□□ -1.15
SSX2IP-208ENST00000490476 KLF16Q9BXK1 252 aaPredicted RBP7.87□□□□□ -1.15
SSX2IP-208ENST00000490476 FHDC1Q9C0D6 1143 aaPredicted RBP7.87□□□□□ -1.15
SSX2IP-208ENST00000490476 STIM2Q9P246 746 aa7.87□□□□□ -1.15
SSX2IP-208ENST00000490476 BRPF3Q9ULD4 1205 aa7.87□□□□□ -1.15
SSX2IP-208ENST00000490476 LRFN2Q9ULH4 789 aa7.87□□□□□ -1.15
SSX2IP-208ENST00000490476 HRH3Q9Y5N1 445 aa7.87□□□□□ -1.15
SSX2IP-208ENST00000490476 EML1O00423 815 aa7.86□□□□□ -1.15
SSX2IP-208ENST00000490476 TNFRSF10BO14763 440 aa7.86□□□□□ -1.15
SSX2IP-208ENST00000490476 NDUFB5O43674 189 aa7.86□□□□□ -1.15
SSX2IP-208ENST00000490476 EIF1AXP47813 144 aaKnown RBP7.86□□□□□ -1.15
SSX2IP-208ENST00000490476 SLC27A3Q5K4L6 730 aa7.86□□□□□ -1.15
SSX2IP-208ENST00000490476 ZDHHC1Q8WTX9 485 aa7.86□□□□□ -1.15
SSX2IP-208ENST00000490476 ARHGEF40Q8TER5 1519 aa7.85□□□□□ -1.15
SSX2IP-208ENST00000490476 ARAP3Q8WWN8 1544 aa7.85□□□□□ -1.15
SSX2IP-208ENST00000490476 NPR3P17342 541 aa7.85□□□□□ -1.15
SSX2IP-208ENST00000490476 SMPD1P17405 629 aa7.85□□□□□ -1.15
SSX2IP-208ENST00000490476 TAGLNQ01995 201 aaKnown RBP7.85□□□□□ -1.15
SSX2IP-208ENST00000490476 TEAD4Q15561 434 aa7.85□□□□□ -1.15
SSX2IP-208ENST00000490476 ZNF326Q5BKZ1 582 aaKnown RBP7.85□□□□□ -1.15
SSX2IP-208ENST00000490476 ALDH16A1Q8IZ83 802 aa7.85□□□□□ -1.15
SSX2IP-208ENST00000490476 MRRFQ96E11 262 aaKnown RBP7.85□□□□□ -1.15
SSX2IP-208ENST00000490476 CCDC87Q9NVE4 849 aa7.85□□□□□ -1.15
SSX2IP-208ENST00000490476 UHRF1BP1Q6BDS2 1440 aa7.85□□□□□ -1.15
SSX2IP-208ENST00000490476 FAM187AA6NFU0 413 aa7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 ZBTB39O15060 712 aa7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 DGKZQ13574 1117 aa7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 ALKBH2Q6NS38 261 aa7.84□□□□□ -1.15
SSX2IP-208ENST00000490476 TMC7Q7Z402 723 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms