RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 POTECB2RU33 542 aa10.29□□□□□ -0.76
PDLIM1-203ENST00000490391 GNPATO15228 680 aa10.29□□□□□ -0.76
PDLIM1-203ENST00000490391 VEGFAP15692 232 aaPredicted RBP10.29□□□□□ -0.76
PDLIM1-203ENST00000490391 CTCFP49711 727 aaPredicted RBP10.29□□□□□ -0.76
PDLIM1-203ENST00000490391 ITPK1Q13572 414 aa10.29□□□□□ -0.76
PDLIM1-203ENST00000490391 SMARCC1Q92922 1105 aaPredicted RBP10.29□□□□□ -0.76
PDLIM1-203ENST00000490391 CGNL1Q0VF96 1302 aa10.29□□□□□ -0.76
PDLIM1-203ENST00000490391 CNTNAP1P78357 1384 aa10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 LOC102724428A0A0B4J2F2 783 aa10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 GLTPD2A6NH11 291 aa10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 CYP27B1O15528 508 aa10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 HOXC9P31274 260 aa10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 SIK1P57059 783 aa10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 DALRD3Q5D0E6 543 aaKnown RBP10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 NBPF6Q5VWK0 638 aa10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 ZNF454Q8N9F8 522 aa10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 NBPF4Q96M43 638 aa10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 GPHNQ9NQX3 736 aaPredicted RBP10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 CCDC87Q9NVE4 849 aa10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 PIM2Q9P1W9 311 aa10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 VIRMAQ69YN4 1812 aaKnown RBP10.28□□□□□ -0.76
PDLIM1-203ENST00000490391 EDC4Q6P2E9 1401 aaKnown RBP10.27□□□□□ -0.77
PDLIM1-203ENST00000490391 LBX1P52954 281 aa10.27□□□□□ -0.77
PDLIM1-203ENST00000490391 LAPTM4AQ15012 233 aa10.27□□□□□ -0.77
PDLIM1-203ENST00000490391 NLGN1Q8N2Q7 840 aa10.27□□□□□ -0.77
PDLIM1-203ENST00000490391 PIGBQ92521 554 aa10.27□□□□□ -0.77
PDLIM1-203ENST00000490391 MAP3K19Q56UN5 1328 aa10.27□□□□□ -0.77
PDLIM1-203ENST00000490391 PCDH11XQ9BZA7 1347 aa10.27□□□□□ -0.77
PDLIM1-203ENST00000490391 PCDH11YQ9BZA8 1340 aa10.27□□□□□ -0.77
PDLIM1-203ENST00000490391 TIAM2Q8IVF5 1701 aa10.27□□□□□ -0.77
PDLIM1-203ENST00000490391 PTPREP23469 700 aa10.26□□□□□ -0.77
PDLIM1-203ENST00000490391 TMF1P82094 1093 aa10.26□□□□□ -0.77
PDLIM1-203ENST00000490391 RASSF7Q02833 373 aa10.26□□□□□ -0.77
PDLIM1-203ENST00000490391 DSG2Q14126 1118 aa10.26□□□□□ -0.77
PDLIM1-203ENST00000490391 WBP1LQ9NX94 342 aa10.26□□□□□ -0.77
PDLIM1-203ENST00000490391 LCE2BO14633 110 aa10.25□□□□□ -0.77
PDLIM1-203ENST00000490391 GYS1P13807 737 aa10.25□□□□□ -0.77
PDLIM1-203ENST00000490391 USHBP1Q8N6Y0 703 aa10.25□□□□□ -0.77
PDLIM1-203ENST00000490391 CCDC88AQ3V6T2 1871 aa10.24□□□□□ -0.77
PDLIM1-203ENST00000490391 HSPA8P11142 646 aaKnown RBP10.24□□□□□ -0.77
PDLIM1-203ENST00000490391 FBLN1P23142 703 aa10.24□□□□□ -0.77
PDLIM1-203ENST00000490391 AIDAQ96BJ3 306 aa10.24□□□□□ -0.77
PDLIM1-203ENST00000490391 NBPF3Q9H094 633 aa10.24□□□□□ -0.77
PDLIM1-203ENST00000490391 KDRP35968 1356 aa10.24□□□□□ -0.77
PDLIM1-203ENST00000490391 LMNB1P20700 586 aa10.23□□□□□ -0.77
PDLIM1-203ENST00000490391 CHRNA5P30532 468 aa10.23□□□□□ -0.77
PDLIM1-203ENST00000490391 VEGFBP49765 207 aa10.23□□□□□ -0.77
PDLIM1-203ENST00000490391 TRAF7Q6Q0C0 670 aa10.23□□□□□ -0.77
PDLIM1-203ENST00000490391 RAPGEF4Q8WZA2 1011 aa10.23□□□□□ -0.77
PDLIM1-203ENST00000490391 ARHGEF1Q92888 912 aaKnown RBP10.23□□□□□ -0.77
PDLIM1-203ENST00000490391 PARP3Q9Y6F1 533 aa10.23□□□□□ -0.77
PDLIM1-203ENST00000490391 A0A1W2PP64 1363 aa10.23□□□□□ -0.77
PDLIM1-203ENST00000490391 RTL1A6NKG5 1358 aa10.23□□□□□ -0.77
PDLIM1-203ENST00000490391 MYH14Q7Z406 1995 aaKnown RBP10.23□□□□□ -0.77
PDLIM1-203ENST00000490391 ZNF831Q5JPB2 1677 aa10.22□□□□□ -0.77
PDLIM1-203ENST00000490391 COL5A3P25940 1745 aaPredicted RBP10.22□□□□□ -0.77
PDLIM1-203ENST00000490391 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
PDLIM1-203ENST00000490391 ATP6V1AP38606 617 aa10.22□□□□□ -0.77
PDLIM1-203ENST00000490391 FOSBP53539 338 aa10.22□□□□□ -0.77
PDLIM1-203ENST00000490391 DDR1Q08345 913 aa10.22□□□□□ -0.77
PDLIM1-203ENST00000490391 NKX1-1Q15270 411 aaPredicted RBP10.22□□□□□ -0.77
PDLIM1-203ENST00000490391 TRAPPC3LQ5T215 181 aa10.22□□□□□ -0.77
PDLIM1-203ENST00000490391 OXER1Q8TDS5 423 aa10.22□□□□□ -0.77
PDLIM1-203ENST00000490391 SLC4A9Q96Q91 983 aa10.22□□□□□ -0.77
PDLIM1-203ENST00000490391 ASAP1Q9ULH1 1129 aa10.22□□□□□ -0.77
PDLIM1-203ENST00000490391 PASKQ96RG2 1323 aa10.22□□□□□ -0.77
PDLIM1-203ENST00000490391 RTCBQ9Y3I0 505 aaKnown RBP10.21□□□□□ -0.77
PDLIM1-203ENST00000490391 CCDC85CA6NKD9 419 aa10.2□□□□□ -0.78
PDLIM1-203ENST00000490391 NFKBIEO00221 500 aa10.2□□□□□ -0.78
PDLIM1-203ENST00000490391 AMPHP49418 695 aa10.2□□□□□ -0.78
PDLIM1-203ENST00000490391 SLC12A5Q9H2X9 1139 aa10.2□□□□□ -0.78
PDLIM1-203ENST00000490391 DLEC1Q9Y238 1755 aa10.2□□□□□ -0.78
PDLIM1-203ENST00000490391 CNTNAP4Q9C0A0 1308 aa10.19□□□□□ -0.78
PDLIM1-203ENST00000490391 RC3H1Q5TC82 1133 aaKnown RBP10.19□□□□□ -0.78
PDLIM1-203ENST00000490391 HDGFL2Q7Z4V5 671 aaPredicted RBP10.19□□□□□ -0.78
PDLIM1-203ENST00000490391 DICER1Q9UPY3 1922 aaKnown RBP10.19□□□□□ -0.78
PDLIM1-203ENST00000490391 NCAPD2Q15021 1401 aa10.18□□□□□ -0.78
PDLIM1-203ENST00000490391 ATG3Q9NT62 314 aa10.18□□□□□ -0.78
PDLIM1-203ENST00000490391 THSD7BQ9C0I4 1608 aa10.18□□□□□ -0.78
PDLIM1-203ENST00000490391 SMG6Q86US8 1419 aaKnown RBP10.17□□□□□ -0.78
PDLIM1-203ENST00000490391 RPS6KA4O75676 772 aa10.17□□□□□ -0.78
PDLIM1-203ENST00000490391 RFC4P35249 363 aa10.17□□□□□ -0.78
PDLIM1-203ENST00000490391 RRS1Q15050 365 aaKnown RBP10.17□□□□□ -0.78
PDLIM1-203ENST00000490391 TMC1Q8TDI8 760 aa10.17□□□□□ -0.78
PDLIM1-203ENST00000490391 COG3Q96JB2 828 aa10.17□□□□□ -0.78
PDLIM1-203ENST00000490391 TMOD3Q9NYL9 352 aa10.17□□□□□ -0.78
PDLIM1-203ENST00000490391 ADAMTS7Q9UKP4 1686 aa10.17□□□□□ -0.78
PDLIM1-203ENST00000490391 INSRP06213 1382 aa10.16□□□□□ -0.78
PDLIM1-203ENST00000490391 RASSF10A6NK89 507 aa10.16□□□□□ -0.78
PDLIM1-203ENST00000490391 TMEM88BA6NKF7 163 aa10.16□□□□□ -0.78
PDLIM1-203ENST00000490391 POLRMTO00411 1230 aaKnown RBP10.16□□□□□ -0.78
PDLIM1-203ENST00000490391 GFRA3O60609 400 aa10.16□□□□□ -0.78
PDLIM1-203ENST00000490391 ANKK1Q8NFD2 765 aa10.16□□□□□ -0.78
PDLIM1-203ENST00000490391 TERF2IPQ9NYB0 399 aa10.16□□□□□ -0.78
PDLIM1-203ENST00000490391 SRP68Q9UHB9 627 aaKnown RBP10.16□□□□□ -0.78
PDLIM1-203ENST00000490391 AFDNP55196 1824 aaKnown RBP10.16□□□□□ -0.78
PDLIM1-203ENST00000490391 NRXN2Q9P2S2 1712 aa10.16□□□□□ -0.78
PDLIM1-203ENST00000490391 FER1L6Q2WGJ9 1857 aa10.15□□□□□ -0.78
PDLIM1-203ENST00000490391 USP42Q9H9J4 1324 aaKnown RBP10.15□□□□□ -0.78
PDLIM1-203ENST00000490391 TM4SF1P30408 202 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms