RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 PIP4K2AP48426 406 aaPredicted RBP15.96■□□□□ 0.15
HDAC1-210ENST00000490081 ANKRD13DQ6ZTN6 518 aa15.96■□□□□ 0.15
HDAC1-210ENST00000490081 NLGN1Q8N2Q7 840 aa15.96■□□□□ 0.15
HDAC1-210ENST00000490081 XAGE3Q8WTP9 111 aa15.96■□□□□ 0.15
HDAC1-210ENST00000490081 PHAXQ9H814 394 aaKnown RBP15.96■□□□□ 0.15
HDAC1-210ENST00000490081 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
HDAC1-210ENST00000490081 NUP98P52948 1817 aa15.96■□□□□ 0.14
HDAC1-210ENST00000490081 PTPRCP08575 1304 aa15.95■□□□□ 0.14
HDAC1-210ENST00000490081 ANXA1P04083 346 aa15.95■□□□□ 0.14
HDAC1-210ENST00000490081 FLIIQ13045 1269 aa15.95■□□□□ 0.14
HDAC1-210ENST00000490081 GIGYF2Q6Y7W6 1299 aaKnown RBP15.95■□□□□ 0.14
HDAC1-210ENST00000490081 TTLL7Q6ZT98 887 aa15.95■□□□□ 0.14
HDAC1-210ENST00000490081 MTFR1LQ9H019 292 aa15.95■□□□□ 0.14
HDAC1-210ENST00000490081 SCN7AQ01118 1682 aa15.95■□□□□ 0.14
HDAC1-210ENST00000490081 GYS1P13807 737 aa15.94■□□□□ 0.14
HDAC1-210ENST00000490081 KSR2Q6VAB6 950 aa15.94■□□□□ 0.14
HDAC1-210ENST00000490081 KIF6Q6ZMV9 814 aa15.94■□□□□ 0.14
HDAC1-210ENST00000490081 BCL2L12Q9HB09 334 aa15.94■□□□□ 0.14
HDAC1-210ENST00000490081 TBC1D2BQ9UPU7 963 aa15.94■□□□□ 0.14
HDAC1-210ENST00000490081 ZNF652Q9Y2D9 606 aa15.94■□□□□ 0.14
HDAC1-210ENST00000490081 KIF16BQ96L93 1317 aa15.94■□□□□ 0.14
HDAC1-210ENST00000490081 IBTKQ9P2D0 1353 aaPredicted RBP15.93■□□□□ 0.14
HDAC1-210ENST00000490081 PHF14O94880 888 aa15.93■□□□□ 0.14
HDAC1-210ENST00000490081 TRIM28Q13263 835 aaKnown RBP15.93■□□□□ 0.14
HDAC1-210ENST00000490081 HSP90AB3PQ58FF7 597 aa15.93■□□□□ 0.14
HDAC1-210ENST00000490081 G2E3Q7L622 706 aa15.93■□□□□ 0.14
HDAC1-210ENST00000490081 SMC4Q9NTJ3 1288 aa15.93■□□□□ 0.14
HDAC1-210ENST00000490081 RCAN3Q9UKA8 241 aa15.93■□□□□ 0.14
HDAC1-210ENST00000490081 IPO8O15397 1037 aaKnown RBP15.92■□□□□ 0.14
HDAC1-210ENST00000490081 TM4SF1P30408 202 aa15.92■□□□□ 0.14
HDAC1-210ENST00000490081 USPL1Q5W0Q7 1092 aa15.92■□□□□ 0.14
HDAC1-210ENST00000490081 SMIM5Q71RC9 77 aa15.92■□□□□ 0.14
HDAC1-210ENST00000490081 ZNF330Q9Y3S2 320 aaPredicted RBP15.92■□□□□ 0.14
HDAC1-210ENST00000490081 ATP10DQ9P241 1426 aa15.92■□□□□ 0.14
HDAC1-210ENST00000490081 TCERG1O14776 1098 aaKnown RBP15.91■□□□□ 0.14
HDAC1-210ENST00000490081 AIMP1Q12904 312 aaKnown RBP15.91■□□□□ 0.14
HDAC1-210ENST00000490081 TCIRG1Q13488 830 aa15.91■□□□□ 0.14
HDAC1-210ENST00000490081 ARFGEF2Q9Y6D5 1785 aa15.9■□□□□ 0.14
HDAC1-210ENST00000490081 PI4KAP2A4QPH2 592 aa15.9■□□□□ 0.14
HDAC1-210ENST00000490081 FKBP5Q13451 457 aaPredicted RBP15.9■□□□□ 0.14
HDAC1-210ENST00000490081 HLFQ16534 295 aa15.9■□□□□ 0.14
HDAC1-210ENST00000490081 RIC3Q7Z5B4 369 aa15.9■□□□□ 0.14
HDAC1-210ENST00000490081 ZNF34Q8IZ26 560 aa15.9■□□□□ 0.14
HDAC1-210ENST00000490081 PI4KAP1Q8N8J0 262 aa15.9■□□□□ 0.14
HDAC1-210ENST00000490081 SYT17Q9BSW7 474 aa15.9■□□□□ 0.14
HDAC1-210ENST00000490081 METTL22Q9BUU2 404 aaPredicted RBP15.9■□□□□ 0.14
HDAC1-210ENST00000490081 FHDC1Q9C0D6 1143 aaPredicted RBP15.9■□□□□ 0.14
HDAC1-210ENST00000490081 SRP68Q9UHB9 627 aaKnown RBP15.9■□□□□ 0.14
HDAC1-210ENST00000490081 ANKRD36CQ5JPF3 1778 aa15.9■□□□□ 0.14
HDAC1-210ENST00000490081 ADCY9O60503 1353 aa15.89■□□□□ 0.13
HDAC1-210ENST00000490081 BCAR3O75815 825 aa15.89■□□□□ 0.13
HDAC1-210ENST00000490081 DNAAF4Q8WXU2 420 aa15.89■□□□□ 0.13
HDAC1-210ENST00000490081 API5Q9BZZ5 524 aaKnown RBP15.89■□□□□ 0.13
HDAC1-210ENST00000490081 NOB1Q9ULX3 412 aaKnown RBP15.89■□□□□ 0.13
HDAC1-210ENST00000490081 MSH5O43196 834 aa15.88■□□□□ 0.13
HDAC1-210ENST00000490081 FKBP8Q14318 412 aa15.88■□□□□ 0.13
HDAC1-210ENST00000490081 PARP10Q53GL7 1025 aa15.88■□□□□ 0.13
HDAC1-210ENST00000490081 ARXQ96QS3 562 aa15.88■□□□□ 0.13
HDAC1-210ENST00000490081 ISCA1Q9BUE6 129 aa15.88■□□□□ 0.13
HDAC1-210ENST00000490081 BCL2L13Q9BXK5 485 aa15.88■□□□□ 0.13
HDAC1-210ENST00000490081 ZBTB3Q9H5J0 574 aa15.88■□□□□ 0.13
HDAC1-210ENST00000490081 MAP3K2Q9Y2U5 619 aa15.88■□□□□ 0.13
HDAC1-210ENST00000490081 YY1P25490 414 aa15.87■□□□□ 0.13
HDAC1-210ENST00000490081 ZKSCAN2Q63HK3 967 aa15.87■□□□□ 0.13
HDAC1-210ENST00000490081 LINS1Q8NG48 757 aa15.87■□□□□ 0.13
HDAC1-210ENST00000490081 PXDNLA1KZ92 1463 aa15.86■□□□□ 0.13
HDAC1-210ENST00000490081 NRXN2Q9P2S2 1712 aa15.86■□□□□ 0.13
HDAC1-210ENST00000490081 MS4A1P11836 297 aa15.86■□□□□ 0.13
HDAC1-210ENST00000490081 NEXNQ0ZGT2 675 aa15.86■□□□□ 0.13
HDAC1-210ENST00000490081 NFIXQ14938 502 aa15.86■□□□□ 0.13
HDAC1-210ENST00000490081 TBC1D9BQ66K14 1250 aa15.86■□□□□ 0.13
HDAC1-210ENST00000490081 ATF7IPQ6VMQ6 1270 aa15.86■□□□□ 0.13
HDAC1-210ENST00000490081 CCDC191Q8NCU4 936 aa15.86■□□□□ 0.13
HDAC1-210ENST00000490081 SETDB2Q96T68 719 aa15.86■□□□□ 0.13
HDAC1-210ENST00000490081 RNF123Q5XPI4 1314 aa15.86■□□□□ 0.13
HDAC1-210ENST00000490081 N4BP2Q86UW6 1770 aaPredicted RBP15.85■□□□□ 0.13
HDAC1-210ENST00000490081 ALDH1L1O75891 902 aa15.85■□□□□ 0.13
HDAC1-210ENST00000490081 BEND3Q5T5X7 828 aa15.85■□□□□ 0.13
HDAC1-210ENST00000490081 CARMIL3Q8ND23 1372 aa15.85■□□□□ 0.13
HDAC1-210ENST00000490081 POLRMTO00411 1230 aaKnown RBP15.84■□□□□ 0.13
HDAC1-210ENST00000490081 INTS3Q68E01 1043 aaKnown RBP15.84■□□□□ 0.13
HDAC1-210ENST00000490081 NLRP10Q86W26 655 aa15.84■□□□□ 0.13
HDAC1-210ENST00000490081 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.84■□□□□ 0.13
HDAC1-210ENST00000490081 NIP7Q9Y221 180 aaKnown RBP eCLIP15.84■□□□□ 0.13
HDAC1-210ENST00000490081 DCAF8L1A6NGE4 600 aa15.83■□□□□ 0.12
HDAC1-210ENST00000490081 IGKV5-2P06315 115 aa15.83■□□□□ 0.12
HDAC1-210ENST00000490081 TRIM27P14373 513 aa15.83■□□□□ 0.12
HDAC1-210ENST00000490081 CCT4P50991 539 aaKnown RBP15.83■□□□□ 0.12
HDAC1-210ENST00000490081 PDE3AQ14432 1141 aa15.83■□□□□ 0.12
HDAC1-210ENST00000490081 PPP1R42Q7Z4L9 355 aa15.83■□□□□ 0.12
HDAC1-210ENST00000490081 NYXQ9GZU5 481 aa15.83■□□□□ 0.12
HDAC1-210ENST00000490081 ABCC4O15439 1325 aa15.83■□□□□ 0.12
HDAC1-210ENST00000490081 AFDNP55196 1824 aaKnown RBP15.82■□□□□ 0.12
HDAC1-210ENST00000490081 NEURL1BA8MQ27 555 aa15.82■□□□□ 0.12
HDAC1-210ENST00000490081 F6X3S4 739 aa15.82■□□□□ 0.12
HDAC1-210ENST00000490081 MMP10P09238 476 aa15.82■□□□□ 0.12
HDAC1-210ENST00000490081 POLD1P28340 1107 aa15.82■□□□□ 0.12
HDAC1-210ENST00000490081 DDR1Q08345 913 aa15.82■□□□□ 0.12
HDAC1-210ENST00000490081 SLC10A5Q5PT55 438 aa15.82■□□□□ 0.12
HDAC1-210ENST00000490081 TPTE2Q6XPS3 522 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms