RNA–Protein interactions for RNA: ENST00000490033.5

C2orf88-208, Transcript of chromosome 2 open reading frame 88, human

TSL 3

Gene C2orf88, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C2orf88-208	ENST00000490033	WNT7A	O00755	349 aa		4.94	□□□□□ -1.62
C2orf88-208	ENST00000490033	HSP90B1	P14625	803 aa	Known RBP	4.94	□□□□□ -1.62
C2orf88-208	ENST00000490033	GNA15	P30679	374 aa		4.94	□□□□□ -1.62
C2orf88-208	ENST00000490033	ZNF76	P36508	570 aa		4.94	□□□□□ -1.62
C2orf88-208	ENST00000490033	MRGPRX2	Q96LB1	330 aa		4.94	□□□□□ -1.62
C2orf88-208	ENST00000490033	CSRNP1	Q96S65	589 aa		4.94	□□□□□ -1.62
C2orf88-208	ENST00000490033	TINF2	Q9BSI4	451 aa		4.94	□□□□□ -1.62
C2orf88-208	ENST00000490033	CFHR5	Q9BXR6	569 aa		4.94	□□□□□ -1.62
C2orf88-208	ENST00000490033	PHACTR1	Q9C0D0	580 aa		4.94	□□□□□ -1.62
C2orf88-208	ENST00000490033	HCST	Q9UBK5	93 aa		4.94	□□□□□ -1.62
C2orf88-208	ENST00000490033	PCSK2	P16519	638 aa		4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	PTGIR	P43119	386 aa		4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	CBLB	Q13191	982 aa		4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	ORC1	Q13415	861 aa		4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	PPARGC1B	Q86YN6	1023 aa	Known RBP	4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	TREML1	Q86YW5	311 aa		4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	GPR152	Q8TDT2	470 aa		4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	FBF1	Q8TES7	1133 aa		4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	EMID1	Q96A84	441 aa	Predicted RBP	4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	NUDT16	Q96DE0	195 aa	Known RBP	4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	NLRP3	Q96P20	1036 aa		4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	TANGO6	Q9C0B7	1094 aa		4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	GGNBP2	Q9H3C7	697 aa		4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	CCSER2	Q9H7U1	834 aa		4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	AK5	Q9Y6K8	562 aa		4.93	□□□□□ -1.62
C2orf88-208	ENST00000490033	MEN1	O00255	615 aa		4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	EIF1AY	O14602	144 aa	Known RBP	4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	SMARCA5	O60264	1052 aa	Predicted RBP	4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	CTSH	P09668	335 aa		4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	NNT	Q13423	1086 aa		4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	C8orf34	Q49A92	452 aa		4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	C1orf53	Q5VUE5	145 aa		4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033		Q6ZVU0	165 aa		4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	SPNS2	Q8IVW8	549 aa		4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	SLC43A3	Q8NBI5	491 aa		4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	FRMD6	Q96NE9	622 aa		4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	NIFK	Q9BYG3	293 aa	Known RBP	4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	ACBD3	Q9H3P7	528 aa		4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	CAPN10	Q9HC96	672 aa		4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033	BCS1L	Q9Y276	419 aa		4.92	□□□□□ -1.62
C2orf88-208	ENST00000490033		A6NHS1	94 aa		4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	ALDH1A1	P00352	501 aa		4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	NEFL	P07196	543 aa		4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	TMEM214	Q6NUQ4	689 aa	Known RBP	4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	TTC16	Q8NEE8	873 aa		4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	RNF166	Q96A37	237 aa	Predicted RBP	4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	ITPKC	Q96DU7	683 aa		4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	CRELD1	Q96HD1	420 aa		4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	SPATA32	Q96LK8	384 aa		4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	AGBL1	Q96MI9	1066 aa		4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	DNAJC25	Q9H1X3	360 aa		4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	PRKAG2	Q9UGJ0	569 aa		4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	4.91	□□□□□ -1.62
C2orf88-208	ENST00000490033	OPLAH	O14841	1288 aa		4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	MICAL2	O94851	1124 aa		4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	RPLP1	P05386	114 aa	Known RBP	4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	CANX	P27824	592 aa	Known RBP	4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	GTF2E1	P29083	439 aa	Predicted RBP	4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	TXLNA	P40222	546 aa		4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	TNNI2	P48788	182 aa		4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	RELB	Q01201	579 aa		4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	DPH6	Q7L8W6	267 aa		4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	RHBDD1	Q8TEB9	315 aa		4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	KLF16	Q9BXK1	252 aa	Predicted RBP	4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	NLRP2	Q9NX02	1062 aa		4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	FAM13B	Q9NYF5	915 aa		4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	SPG7	Q9UQ90	795 aa		4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	WASF2	Q9Y6W5	498 aa		4.9	□□□□□ -1.63
C2orf88-208	ENST00000490033	CPNE3	O75131	537 aa	Known RBP	4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	ZIC2	O95409	532 aa	Predicted RBP	4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	ATP2B1	P20020	1258 aa		4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	EIF4B	P23588	611 aa	Known RBP	4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	SLC19A1	P41440	591 aa		4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	GNL2	Q13823	731 aa	Known RBP	4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	C7orf43	Q8WVR3	580 aa		4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	DHX38	Q92620	1227 aa	Known RBP	4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	DNAJC2	Q99543	621 aa	Known RBP	4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	GRIP2	Q9C0E4	1043 aa		4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	ZNF395	Q9H8N7	513 aa	Predicted RBP	4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	DDX41	Q9UJV9	622 aa	Known RBP	4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	CADPS	Q9ULU8	1353 aa		4.89	□□□□□ -1.63
C2orf88-208	ENST00000490033	TGFBR3L	H3BV60	316 aa		4.88	□□□□□ -1.63
C2orf88-208	ENST00000490033	PLA2G4A	P47712	749 aa		4.88	□□□□□ -1.63
C2orf88-208	ENST00000490033	RACK1	P63244	317 aa	Known RBP	4.88	□□□□□ -1.63
C2orf88-208	ENST00000490033	HIF1A	Q16665	826 aa		4.88	□□□□□ -1.63
C2orf88-208	ENST00000490033	ZNF394	Q53GI3	561 aa		4.88	□□□□□ -1.63
C2orf88-208	ENST00000490033	RHPN1	Q8TCX5	695 aa		4.88	□□□□□ -1.63
C2orf88-208	ENST00000490033	GML	Q99445	158 aa		4.88	□□□□□ -1.63
C2orf88-208	ENST00000490033	ZFAND3	Q9H8U3	227 aa		4.88	□□□□□ -1.63
C2orf88-208	ENST00000490033	TNFRSF21	O75509	655 aa		4.87	□□□□□ -1.63
C2orf88-208	ENST00000490033	DNAJA1	P31689	397 aa	Known RBP	4.87	□□□□□ -1.63
C2orf88-208	ENST00000490033	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
C2orf88-208	ENST00000490033	WDR4	P57081	412 aa	Known RBP	4.87	□□□□□ -1.63
C2orf88-208	ENST00000490033	PTPN12	Q05209	780 aa	Known RBP	4.87	□□□□□ -1.63
C2orf88-208	ENST00000490033	C4orf17	Q53FE4	359 aa		4.87	□□□□□ -1.63
C2orf88-208	ENST00000490033	GNAS	Q5JWF2	1037 aa		4.87	□□□□□ -1.63
C2orf88-208	ENST00000490033	SLC27A3	Q5K4L6	730 aa		4.87	□□□□□ -1.63
C2orf88-208	ENST00000490033	USPL1	Q5W0Q7	1092 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms