RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 RIC3Q7Z5B4 369 aa14.65□□□□□ -0.06
TRIM40-208ENST00000489892 SRCIN1Q9C0H9 1055 aa14.65□□□□□ -0.06
TRIM40-208ENST00000489892 PHAXQ9H814 394 aaKnown RBP14.65□□□□□ -0.06
TRIM40-208ENST00000489892 ANO8Q9HCE9 1232 aaPredicted RBP14.65□□□□□ -0.06
TRIM40-208ENST00000489892 TNNQ9UQP3 1299 aa14.65□□□□□ -0.06
TRIM40-208ENST00000489892 PI4KAP2A4QPH2 592 aa14.64□□□□□ -0.07
TRIM40-208ENST00000489892 ZBTB7BO15156 539 aaPredicted RBP14.64□□□□□ -0.07
TRIM40-208ENST00000489892 ATP6V1AP38606 617 aa14.64□□□□□ -0.07
TRIM40-208ENST00000489892 PTF1AQ7RTS3 328 aa14.64□□□□□ -0.07
TRIM40-208ENST00000489892 DNAJC10Q8IXB1 793 aa14.64□□□□□ -0.07
TRIM40-208ENST00000489892 PI4KAP1Q8N8J0 262 aa14.64□□□□□ -0.07
TRIM40-208ENST00000489892 PLBD2Q8NHP8 589 aa14.64□□□□□ -0.07
TRIM40-208ENST00000489892 XAGE3Q8WTP9 111 aa14.64□□□□□ -0.07
TRIM40-208ENST00000489892 F6X3S4 739 aa14.63□□□□□ -0.07
TRIM40-208ENST00000489892 CYP19A1P11511 503 aaPredicted RBP14.63□□□□□ -0.07
TRIM40-208ENST00000489892 PROSER3Q2NL68 480 aa14.63□□□□□ -0.07
TRIM40-208ENST00000489892 KIF6Q6ZMV9 814 aa14.63□□□□□ -0.07
TRIM40-208ENST00000489892 ANKRD13DQ6ZTN6 518 aa14.63□□□□□ -0.07
TRIM40-208ENST00000489892 COPS6Q7L5N1 327 aa14.63□□□□□ -0.07
TRIM40-208ENST00000489892 LINS1Q8NG48 757 aa14.63□□□□□ -0.07
TRIM40-208ENST00000489892 STK32BQ9NY57 414 aa14.63□□□□□ -0.07
TRIM40-208ENST00000489892 MAP3K2Q9Y2U5 619 aa14.63□□□□□ -0.07
TRIM40-208ENST00000489892 ADCY9O60503 1353 aa14.62□□□□□ -0.07
TRIM40-208ENST00000489892 BTAF1O14981 1849 aa14.62□□□□□ -0.07
TRIM40-208ENST00000489892 CAPN15O75808 1086 aa14.62□□□□□ -0.07
TRIM40-208ENST00000489892 IL6STP40189 918 aaPredicted RBP14.62□□□□□ -0.07
TRIM40-208ENST00000489892 TJP1Q07157 1748 aa14.61□□□□□ -0.07
TRIM40-208ENST00000489892 HMMRO75330 724 aa14.61□□□□□ -0.07
TRIM40-208ENST00000489892 ZBTB7AO95365 584 aa14.61□□□□□ -0.07
TRIM40-208ENST00000489892 ANXA1P04083 346 aa14.61□□□□□ -0.07
TRIM40-208ENST00000489892 AIMP1Q12904 312 aaKnown RBP14.61□□□□□ -0.07
TRIM40-208ENST00000489892 HDAC1Q13547 482 aaPredicted RBP14.61□□□□□ -0.07
TRIM40-208ENST00000489892 LRP10Q7Z4F1 713 aa14.61□□□□□ -0.07
TRIM40-208ENST00000489892 RPAP2Q8IXW5 612 aaPredicted RBP14.61□□□□□ -0.07
TRIM40-208ENST00000489892 METTL22Q9BUU2 404 aaPredicted RBP14.61□□□□□ -0.07
TRIM40-208ENST00000489892 CCDC87Q9NVE4 849 aa14.61□□□□□ -0.07
TRIM40-208ENST00000489892 A0A087WZG4 1122 aa14.6□□□□□ -0.07
TRIM40-208ENST00000489892 NBPF26B4DH59 902 aa14.6□□□□□ -0.07
TRIM40-208ENST00000489892 A1BGP04217 495 aa14.6□□□□□ -0.07
TRIM40-208ENST00000489892 GNAI2P04899 355 aa14.6□□□□□ -0.07
TRIM40-208ENST00000489892 UBTFL1P0CB47 393 aaPredicted RBP14.6□□□□□ -0.07
TRIM40-208ENST00000489892 ANP32AP39687 249 aaKnown RBP14.6□□□□□ -0.07
TRIM40-208ENST00000489892 TXNRD1Q16881 649 aa14.6□□□□□ -0.07
TRIM40-208ENST00000489892 HSP90AB3PQ58FF7 597 aa14.6□□□□□ -0.07
TRIM40-208ENST00000489892 BEND3Q5T5X7 828 aa14.6□□□□□ -0.07
TRIM40-208ENST00000489892 NBPF10Q6P3W6 841 aaKnown RBP14.6□□□□□ -0.07
TRIM40-208ENST00000489892 NBPF15Q8N660 670 aa14.6□□□□□ -0.07
TRIM40-208ENST00000489892 RGL2O15211 777 aa14.59□□□□□ -0.07
TRIM40-208ENST00000489892 SLC27A3Q5K4L6 730 aa14.59□□□□□ -0.07
TRIM40-208ENST00000489892 PROM2Q8N271 834 aa14.59□□□□□ -0.07
TRIM40-208ENST00000489892 PCDH10Q9P2E7 1040 aa14.59□□□□□ -0.07
TRIM40-208ENST00000489892 CNTNAP4Q9C0A0 1308 aa14.59□□□□□ -0.07
TRIM40-208ENST00000489892 CRKLP46109 303 aaKnown RBP14.58□□□□□ -0.08
TRIM40-208ENST00000489892 RC3H1Q5TC82 1133 aaKnown RBP14.58□□□□□ -0.08
TRIM40-208ENST00000489892 SLC4A9Q96Q91 983 aa14.58□□□□□ -0.08
TRIM40-208ENST00000489892 PDGFDQ9GZP0 370 aaPredicted RBP14.58□□□□□ -0.08
TRIM40-208ENST00000489892 C9orf78Q9NZ63 289 aaPredicted RBP14.58□□□□□ -0.08
TRIM40-208ENST00000489892 ERVV-1B6SEH8 477 aa14.57□□□□□ -0.08
TRIM40-208ENST00000489892 SLC15A2Q16348 729 aa14.57□□□□□ -0.08
TRIM40-208ENST00000489892 MEIS3Q99687 375 aa14.57□□□□□ -0.08
TRIM40-208ENST00000489892 CCNL1Q9UK58 526 aaPredicted RBP14.57□□□□□ -0.08
TRIM40-208ENST00000489892 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
TRIM40-208ENST00000489892 PCDHB15Q9Y5E8 787 aa14.57□□□□□ -0.08
TRIM40-208ENST00000489892 MAP3K15Q6ZN16 1313 aa14.57□□□□□ -0.08
TRIM40-208ENST00000489892 KDM2BQ8NHM5 1336 aa14.57□□□□□ -0.08
TRIM40-208ENST00000489892 LY75O60449 1722 aa14.57□□□□□ -0.08
TRIM40-208ENST00000489892 ARFGEF2Q9Y6D5 1785 aa14.57□□□□□ -0.08
TRIM40-208ENST00000489892 COL5A3P25940 1745 aaPredicted RBP14.56□□□□□ -0.08
TRIM40-208ENST00000489892 GRM8O00222 908 aa14.56□□□□□ -0.08
TRIM40-208ENST00000489892 GCC1Q96CN9 775 aa14.56□□□□□ -0.08
TRIM40-208ENST00000489892 ZNF652Q9Y2D9 606 aa14.56□□□□□ -0.08
TRIM40-208ENST00000489892 ZBTB1Q9Y2K1 713 aa14.56□□□□□ -0.08
TRIM40-208ENST00000489892 ZNF330Q9Y3S2 320 aaPredicted RBP14.56□□□□□ -0.08
TRIM40-208ENST00000489892 EIF5P55010 431 aaKnown RBP14.55□□□□□ -0.08
TRIM40-208ENST00000489892 ITPK1Q13572 414 aa14.55□□□□□ -0.08
TRIM40-208ENST00000489892 ANKRD44Q8N8A2 993 aa14.55□□□□□ -0.08
TRIM40-208ENST00000489892 CCDC191Q8NCU4 936 aa14.55□□□□□ -0.08
TRIM40-208ENST00000489892 MYD88Q99836 296 aa14.55□□□□□ -0.08
TRIM40-208ENST00000489892 MTFR1LQ9H019 292 aa14.55□□□□□ -0.08
TRIM40-208ENST00000489892 USP44Q9H0E7 712 aa14.55□□□□□ -0.08
TRIM40-208ENST00000489892 UTYO14607 1347 aa14.55□□□□□ -0.08
TRIM40-208ENST00000489892 NEURL1BA8MQ27 555 aa14.54□□□□□ -0.08
TRIM40-208ENST00000489892 PTGER2P43116 358 aa14.54□□□□□ -0.08
TRIM40-208ENST00000489892 TRIM28Q13263 835 aaKnown RBP14.54□□□□□ -0.08
TRIM40-208ENST00000489892 GCKRQ14397 625 aa14.54□□□□□ -0.08
TRIM40-208ENST00000489892 INTS5Q6P9B9 1019 aaKnown RBP14.54□□□□□ -0.08
TRIM40-208ENST00000489892 DZIP3Q86Y13 1208 aaKnown RBP14.54□□□□□ -0.08
TRIM40-208ENST00000489892 CWC25Q9NXE8 425 aaPredicted RBP14.54□□□□□ -0.08
TRIM40-208ENST00000489892 ZBTB47Q9UFB7 747 aaPredicted RBP14.54□□□□□ -0.08
TRIM40-208ENST00000489892 COL15A1P39059 1388 aa14.53□□□□□ -0.08
TRIM40-208ENST00000489892 MSH5O43196 834 aa14.53□□□□□ -0.08
TRIM40-208ENST00000489892 HSP90B1P14625 803 aaKnown RBP14.53□□□□□ -0.08
TRIM40-208ENST00000489892 PIP4K2AP48426 406 aaPredicted RBP14.53□□□□□ -0.08
TRIM40-208ENST00000489892 PRELPP51888 382 aa14.53□□□□□ -0.08
TRIM40-208ENST00000489892 TCIRG1Q13488 830 aa14.53□□□□□ -0.08
TRIM40-208ENST00000489892 GIGYF2Q6Y7W6 1299 aaKnown RBP14.53□□□□□ -0.08
TRIM40-208ENST00000489892 TTLL7Q6ZT98 887 aa14.53□□□□□ -0.08
TRIM40-208ENST00000489892 ZBTB3Q9H5J0 574 aa14.53□□□□□ -0.08
TRIM40-208ENST00000489892 ADRA2BP18089 450 aa14.52□□□□□ -0.09
TRIM40-208ENST00000489892 CEP85Q6P2H3 762 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms