RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 ST5P78524 1137 aa20.13■□□□□ 0.81
FAM3D-204ENST00000489857 PRPF40BQ6NWY9 871 aaKnown RBP20.13■□□□□ 0.81
FAM3D-204ENST00000489857 CNKSR1Q969H4 720 aa20.13■□□□□ 0.81
FAM3D-204ENST00000489857 TAOK3Q9H2K8 898 aa20.13■□□□□ 0.81
FAM3D-204ENST00000489857 NPHP1O15259 732 aa20.12■□□□□ 0.81
FAM3D-204ENST00000489857 SLX4Q8IY92 1834 aa20.11■□□□□ 0.81
FAM3D-204ENST00000489857 MASTLQ96GX5 879 aa20.11■□□□□ 0.81
FAM3D-204ENST00000489857 CFAP53Q96M91 514 aa20.11■□□□□ 0.81
FAM3D-204ENST00000489857 DICER1Q9UPY3 1922 aaKnown RBP20.1■□□□□ 0.81
FAM3D-204ENST00000489857 MCM10Q7L590 875 aa20.1■□□□□ 0.81
FAM3D-204ENST00000489857 DDNO94850 711 aaPredicted RBP20.09■□□□□ 0.81
FAM3D-204ENST00000489857 CLEC4GQ6UXB4 293 aa20.09■□□□□ 0.81
FAM3D-204ENST00000489857 NBPF26B4DH59 902 aa20.08■□□□□ 0.81
FAM3D-204ENST00000489857 SNRPA1P09661 255 aaKnown RBP20.08■□□□□ 0.81
FAM3D-204ENST00000489857 POTEIP0CG38 1075 aa20.08■□□□□ 0.81
FAM3D-204ENST00000489857 POTEJP0CG39 1038 aa20.08■□□□□ 0.81
FAM3D-204ENST00000489857 U2AF1L5P0DN76 240 aaPredicted RBP20.08■□□□□ 0.81
FAM3D-204ENST00000489857 U2AF1Q01081 240 aaKnown RBP eCLIP20.08■□□□□ 0.81
FAM3D-204ENST00000489857 NBPF10Q6P3W6 841 aaKnown RBP20.08■□□□□ 0.81
FAM3D-204ENST00000489857 NBPF5PQ86XG9 351 aaPredicted RBP20.08■□□□□ 0.81
FAM3D-204ENST00000489857 NBPF15Q8N660 670 aa20.08■□□□□ 0.81
FAM3D-204ENST00000489857 C7orf43Q8WVR3 580 aa20.08■□□□□ 0.81
FAM3D-204ENST00000489857 NUDCQ9Y266 331 aa20.08■□□□□ 0.81
FAM3D-204ENST00000489857 HSPA1AP0DMV8 641 aaKnown RBP20.07■□□□□ 0.8
FAM3D-204ENST00000489857 HSPA1BP0DMV9 641 aaKnown RBP20.07■□□□□ 0.8
FAM3D-204ENST00000489857 DCTN1Q14203 1278 aa20.07■□□□□ 0.8
FAM3D-204ENST00000489857 SOGA3Q5TF21 947 aa20.07■□□□□ 0.8
FAM3D-204ENST00000489857 CHADLQ6NUI6 762 aa20.07■□□□□ 0.8
FAM3D-204ENST00000489857 RTF1Q92541 710 aaKnown RBP20.07■□□□□ 0.8
FAM3D-204ENST00000489857 ARFGEF2Q9Y6D5 1785 aa20.07■□□□□ 0.8
FAM3D-204ENST00000489857 PPP2R1AP30153 589 aa20.06■□□□□ 0.8
FAM3D-204ENST00000489857 CACNA1SQ13698 1873 aa20.06■□□□□ 0.8
FAM3D-204ENST00000489857 TNS4Q8IZW8 715 aa20.06■□□□□ 0.8
FAM3D-204ENST00000489857 ZNF652Q9Y2D9 606 aa20.06■□□□□ 0.8
FAM3D-204ENST00000489857 KLRG2A4D1S0 409 aaPredicted RBP20.05■□□□□ 0.8
FAM3D-204ENST00000489857 NPR1P16066 1061 aa20.04■□□□□ 0.8
FAM3D-204ENST00000489857 CCDC93Q567U6 631 aa20.04■□□□□ 0.8
FAM3D-204ENST00000489857 PCNTO95613 3336 aa20.04■□□□□ 0.8
FAM3D-204ENST00000489857 OLFM4Q6UX06 510 aa20.03■□□□□ 0.8
FAM3D-204ENST00000489857 CREBZFQ9NS37 354 aa20.03■□□□□ 0.8
FAM3D-204ENST00000489857 NIP7Q9Y221 180 aaKnown RBP eCLIP20.03■□□□□ 0.8
FAM3D-204ENST00000489857 RGL2O15211 777 aa20.02■□□□□ 0.8
FAM3D-204ENST00000489857 HTATSF1O43719 755 aaKnown RBP20.02■□□□□ 0.8
FAM3D-204ENST00000489857 CAPN15O75808 1086 aa20.02■□□□□ 0.8
FAM3D-204ENST00000489857 HLFQ16534 295 aa20.02■□□□□ 0.8
FAM3D-204ENST00000489857 TPTE2Q6XPS3 522 aa20.02■□□□□ 0.8
FAM3D-204ENST00000489857 L3MBTL3Q96JM7 780 aaPredicted RBP20.02■□□□□ 0.8
FAM3D-204ENST00000489857 FAM177BA6PVY3 158 aa20.01■□□□□ 0.79
FAM3D-204ENST00000489857 FKBP4Q02790 459 aaKnown RBP eCLIP20.01■□□□□ 0.79
FAM3D-204ENST00000489857 ZNF277Q9NRM2 450 aaPredicted RBP20.01■□□□□ 0.79
FAM3D-204ENST00000489857 MIS18AQ9NYP9 233 aa20.01■□□□□ 0.79
FAM3D-204ENST00000489857 MKRN1Q9UHC7 482 aaKnown RBP20.01■□□□□ 0.79
FAM3D-204ENST00000489857 ZNF541Q9H0D2 1346 aa20.01■□□□□ 0.79
FAM3D-204ENST00000489857 IQCA1LA6NCM1 817 aa20■□□□□ 0.79
FAM3D-204ENST00000489857 TAF7Q15545 349 aaPredicted RBP20■□□□□ 0.79
FAM3D-204ENST00000489857 TAF1DQ9H5J8 278 aaPredicted RBP20■□□□□ 0.79
FAM3D-204ENST00000489857 PASKQ96RG2 1323 aa19.99■□□□□ 0.79
FAM3D-204ENST00000489857 LDHDQ86WU2 507 aa19.98■□□□□ 0.79
FAM3D-204ENST00000489857 ABCC12Q96J65 1359 aa19.97■□□□□ 0.79
FAM3D-204ENST00000489857 RTKN2Q8IZC4 609 aa19.97■□□□□ 0.79
FAM3D-204ENST00000489857 LAMB4A4D0S4 1761 aa19.96■□□□□ 0.79
FAM3D-204ENST00000489857 SNED1Q8TER0 1413 aa19.96■□□□□ 0.79
FAM3D-204ENST00000489857 SCN4AP35499 1836 aa19.96■□□□□ 0.79
FAM3D-204ENST00000489857 CNTNAP1P78357 1384 aa19.95■□□□□ 0.79
FAM3D-204ENST00000489857 ITGBL1O95965 494 aaPredicted RBP19.95■□□□□ 0.78
FAM3D-204ENST00000489857 ALDH1B1P30837 517 aa19.95■□□□□ 0.78
FAM3D-204ENST00000489857 SYNE4Q8N205 404 aa19.95■□□□□ 0.78
FAM3D-204ENST00000489857 NGEFQ8N5V2 710 aa19.95■□□□□ 0.78
FAM3D-204ENST00000489857 GTF2E1P29083 439 aaPredicted RBP19.94■□□□□ 0.78
FAM3D-204ENST00000489857 IARSP41252 1262 aaKnown RBP19.94■□□□□ 0.78
FAM3D-204ENST00000489857 CRY2Q49AN0 593 aa19.94■□□□□ 0.78
FAM3D-204ENST00000489857 EAPPQ56P03 285 aaPredicted RBP19.94■□□□□ 0.78
FAM3D-204ENST00000489857 NUTM1Q86Y26 1132 aa19.94■□□□□ 0.78
FAM3D-204ENST00000489857 HACL1Q9UJ83 578 aa19.94■□□□□ 0.78
FAM3D-204ENST00000489857 ERVV-1B6SEH8 477 aa19.93■□□□□ 0.78
FAM3D-204ENST00000489857 FZD9O00144 591 aa19.93■□□□□ 0.78
FAM3D-204ENST00000489857 TTLL7Q6ZT98 887 aa19.93■□□□□ 0.78
FAM3D-204ENST00000489857 ADAMTSL1Q8N6G6 1762 aa19.93■□□□□ 0.78
FAM3D-204ENST00000489857 EPHX2P34913 555 aa19.92■□□□□ 0.78
FAM3D-204ENST00000489857 EIF4A1P60842 406 aaKnown RBP19.92■□□□□ 0.78
FAM3D-204ENST00000489857 PNISRQ8TF01 805 aaKnown RBP19.92■□□□□ 0.78
FAM3D-204ENST00000489857 RNF123Q5XPI4 1314 aa19.92■□□□□ 0.78
FAM3D-204ENST00000489857 MAP3K15Q6ZN16 1313 aa19.92■□□□□ 0.78
FAM3D-204ENST00000489857 KDM3BQ7LBC6 1761 aa19.92■□□□□ 0.78
FAM3D-204ENST00000489857 PLEKHF1Q96S99 279 aa19.91■□□□□ 0.78
FAM3D-204ENST00000489857 PSMD1Q99460 953 aa19.91■□□□□ 0.78
FAM3D-204ENST00000489857 THUMPD2Q9BTF0 503 aaKnown RBP19.91■□□□□ 0.78
FAM3D-204ENST00000489857 NYXQ9GZU5 481 aa19.91■□□□□ 0.78
FAM3D-204ENST00000489857 RRP7AQ9Y3A4 280 aaKnown RBP19.91■□□□□ 0.78
FAM3D-204ENST00000489857 UBN2Q6ZU65 1347 aa19.91■□□□□ 0.78
FAM3D-204ENST00000489857 COL4A5P29400 1685 aa19.91■□□□□ 0.78
FAM3D-204ENST00000489857 TMEM88BA6NKF7 163 aa19.9■□□□□ 0.78
FAM3D-204ENST00000489857 FOXN1O15353 648 aa19.9■□□□□ 0.78
FAM3D-204ENST00000489857 SLC51AQ86UW1 340 aa19.9■□□□□ 0.78
FAM3D-204ENST00000489857 CLEC11AQ9Y240 323 aa19.9■□□□□ 0.78
FAM3D-204ENST00000489857 MYL6BP14649 208 aa19.89■□□□□ 0.77
FAM3D-204ENST00000489857 GPTP24298 496 aa19.89■□□□□ 0.77
FAM3D-204ENST00000489857 HOXA10P31260 410 aaPredicted RBP19.89■□□□□ 0.77
FAM3D-204ENST00000489857 VEGFBP49765 207 aa19.89■□□□□ 0.77
FAM3D-204ENST00000489857 RIC1Q4ADV7 1423 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms