RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 NBPF10Q6P3W6 841 aaKnown RBP15.34■□□□□ 0.05
GGPS1-207ENST00000489692 NBPF15Q8N660 670 aa15.34■□□□□ 0.05
GGPS1-207ENST00000489692 BRIP1Q9BX63 1249 aa15.34■□□□□ 0.05
GGPS1-207ENST00000489692 EIF4A1P60842 406 aaKnown RBP15.33■□□□□ 0.04
GGPS1-207ENST00000489692 KIF6Q6ZMV9 814 aa15.33■□□□□ 0.04
GGPS1-207ENST00000489692 NIP7Q9Y221 180 aaKnown RBP eCLIP15.33■□□□□ 0.04
GGPS1-207ENST00000489692 LAS1LQ9Y4W2 734 aaKnown RBP15.33■□□□□ 0.04
GGPS1-207ENST00000489692 UBR2Q8IWV8 1755 aa15.32■□□□□ 0.04
GGPS1-207ENST00000489692 TMPOP42166 694 aaKnown RBP15.32■□□□□ 0.04
GGPS1-207ENST00000489692 RASSF7Q02833 373 aa15.32■□□□□ 0.04
GGPS1-207ENST00000489692 CLEC4GQ6UXB4 293 aa15.32■□□□□ 0.04
GGPS1-207ENST00000489692 PDZRN3Q9UPQ7 1066 aa15.32■□□□□ 0.04
GGPS1-207ENST00000489692 N4BP2Q86UW6 1770 aaPredicted RBP15.31■□□□□ 0.04
GGPS1-207ENST00000489692 EIF2S2P20042 333 aaKnown RBP15.31■□□□□ 0.04
GGPS1-207ENST00000489692 ERICH6BQ5W0A0 696 aa15.31■□□□□ 0.04
GGPS1-207ENST00000489692 C21orf2O43822 256 aa15.3■□□□□ 0.04
GGPS1-207ENST00000489692 TPTE2Q6XPS3 522 aa15.3■□□□□ 0.04
GGPS1-207ENST00000489692 C16orf71Q8IYS4 520 aaPredicted RBP15.3■□□□□ 0.04
GGPS1-207ENST00000489692 RUNDC1Q96C34 613 aa15.3■□□□□ 0.04
GGPS1-207ENST00000489692 NECTIN2Q92692 538 aa15.29■□□□□ 0.04
GGPS1-207ENST00000489692 ADAMTS8Q9UP79 889 aa15.29■□□□□ 0.04
GGPS1-207ENST00000489692 KDM2BQ8NHM5 1336 aa15.28■□□□□ 0.04
GGPS1-207ENST00000489692 LMNB1P20700 586 aa15.28■□□□□ 0.04
GGPS1-207ENST00000489692 HLFQ16534 295 aa15.28■□□□□ 0.04
GGPS1-207ENST00000489692 CNKSR1Q969H4 720 aa15.28■□□□□ 0.04
GGPS1-207ENST00000489692 ZBTB3Q9H5J0 574 aa15.28■□□□□ 0.04
GGPS1-207ENST00000489692 NMRK2Q9NPI5 230 aa15.28■□□□□ 0.04
GGPS1-207ENST00000489692 KIF13BQ9NQT8 1826 aa15.27■□□□□ 0.04
GGPS1-207ENST00000489692 KIF3CO14782 793 aa15.27■□□□□ 0.04
GGPS1-207ENST00000489692 TTLL7Q6ZT98 887 aa15.27■□□□□ 0.04
GGPS1-207ENST00000489692 MASTLQ96GX5 879 aa15.27■□□□□ 0.04
GGPS1-207ENST00000489692 SIPA1L3O60292 1781 aaPredicted RBP15.26■□□□□ 0.03
GGPS1-207ENST00000489692 MAP3K15Q6ZN16 1313 aa15.26■□□□□ 0.03
GGPS1-207ENST00000489692 GPTP24298 496 aa15.26■□□□□ 0.03
GGPS1-207ENST00000489692 STYK1Q6J9G0 422 aa15.26■□□□□ 0.03
GGPS1-207ENST00000489692 KIAA1551Q9HCM1 1747 aa15.26■□□□□ 0.03
GGPS1-207ENST00000489692 VIRMAQ69YN4 1812 aaKnown RBP15.25■□□□□ 0.03
GGPS1-207ENST00000489692 ERVV-1B6SEH8 477 aa15.25■□□□□ 0.03
GGPS1-207ENST00000489692 SRGNP10124 158 aa15.25■□□□□ 0.03
GGPS1-207ENST00000489692 PRPF40BQ6NWY9 871 aaKnown RBP15.25■□□□□ 0.03
GGPS1-207ENST00000489692 NYXQ9GZU5 481 aa15.25■□□□□ 0.03
GGPS1-207ENST00000489692 BABAM1Q9NWV8 329 aa15.25■□□□□ 0.03
GGPS1-207ENST00000489692 RGL2O15211 777 aa15.24■□□□□ 0.03
GGPS1-207ENST00000489692 NPR1P16066 1061 aa15.24■□□□□ 0.03
GGPS1-207ENST00000489692 AIMP1Q12904 312 aaKnown RBP15.24■□□□□ 0.03
GGPS1-207ENST00000489692 NUTM1Q86Y26 1132 aa15.24■□□□□ 0.03
GGPS1-207ENST00000489692 RRAGCQ9HB90 399 aa15.24■□□□□ 0.03
GGPS1-207ENST00000489692 ERBB4Q15303 1308 aa15.23■□□□□ 0.03
GGPS1-207ENST00000489692 SCN7AQ01118 1682 aa15.23■□□□□ 0.03
GGPS1-207ENST00000489692 NFKBIEO00221 500 aa15.23■□□□□ 0.03
GGPS1-207ENST00000489692 TOMM70O94826 608 aa15.23■□□□□ 0.03
GGPS1-207ENST00000489692 ANXA1P04083 346 aa15.23■□□□□ 0.03
GGPS1-207ENST00000489692 SOGA3Q5TF21 947 aa15.23■□□□□ 0.03
GGPS1-207ENST00000489692 TAOK3Q9H2K8 898 aa15.23■□□□□ 0.03
GGPS1-207ENST00000489692 HSPA6P17066 643 aa15.22■□□□□ 0.03
GGPS1-207ENST00000489692 ERFEQ4G0M1 354 aa15.22■□□□□ 0.03
GGPS1-207ENST00000489692 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
GGPS1-207ENST00000489692 KRT24Q2M2I5 525 aa15.21■□□□□ 0.03
GGPS1-207ENST00000489692 DPY19L2Q6NUT2 758 aa15.21■□□□□ 0.03
GGPS1-207ENST00000489692 RPGRQ92834 1020 aaKnown RBP15.21■□□□□ 0.03
GGPS1-207ENST00000489692 CHL1O00533 1208 aa15.2■□□□□ 0.02
GGPS1-207ENST00000489692 APAF1O14727 1248 aa15.2■□□□□ 0.02
GGPS1-207ENST00000489692 ALDH1B1P30837 517 aa15.2■□□□□ 0.02
GGPS1-207ENST00000489692 PROSER3Q2NL68 480 aa15.2■□□□□ 0.02
GGPS1-207ENST00000489692 CCDC93Q567U6 631 aa15.2■□□□□ 0.02
GGPS1-207ENST00000489692 HDGFL1Q5TGJ6 251 aa15.2■□□□□ 0.02
GGPS1-207ENST00000489692 GIGYF2Q6Y7W6 1299 aaKnown RBP15.2■□□□□ 0.02
GGPS1-207ENST00000489692 PPP1R42Q7Z4L9 355 aa15.2■□□□□ 0.02
GGPS1-207ENST00000489692 XAGE3Q8WTP9 111 aa15.2■□□□□ 0.02
GGPS1-207ENST00000489692 NRXN2Q9P2S2 1712 aa15.2■□□□□ 0.02
GGPS1-207ENST00000489692 ZC3H4Q9UPT8 1303 aaKnown RBP15.19■□□□□ 0.02
GGPS1-207ENST00000489692 PRELPP51888 382 aa15.19■□□□□ 0.02
GGPS1-207ENST00000489692 SUSD4Q5VX71 490 aa15.19■□□□□ 0.02
GGPS1-207ENST00000489692 COPS6Q7L5N1 327 aa15.19■□□□□ 0.02
GGPS1-207ENST00000489692 RNF123Q5XPI4 1314 aa15.18■□□□□ 0.02
GGPS1-207ENST00000489692 AFDNP55196 1824 aaKnown RBP15.18■□□□□ 0.02
GGPS1-207ENST00000489692 GLTPD2A6NH11 291 aa15.18■□□□□ 0.02
GGPS1-207ENST00000489692 CALD1Q05682 793 aaKnown RBP15.18■□□□□ 0.02
GGPS1-207ENST00000489692 PDIA6Q15084 440 aa15.18■□□□□ 0.02
GGPS1-207ENST00000489692 PARP10Q53GL7 1025 aa15.18■□□□□ 0.02
GGPS1-207ENST00000489692 UBN2Q6ZU65 1347 aa15.17■□□□□ 0.02
GGPS1-207ENST00000489692 ABCC12Q96J65 1359 aa15.17■□□□□ 0.02
GGPS1-207ENST00000489692 TCERG1O14776 1098 aaKnown RBP15.17■□□□□ 0.02
GGPS1-207ENST00000489692 HSP90AB3PQ58FF7 597 aa15.17■□□□□ 0.02
GGPS1-207ENST00000489692 ZNF34Q8IZ26 560 aa15.17■□□□□ 0.02
GGPS1-207ENST00000489692 RBM46Q8TBY0 533 aaKnown RBP15.17■□□□□ 0.02
GGPS1-207ENST00000489692 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
GGPS1-207ENST00000489692 UTP14AQ9BVJ6 771 aaKnown RBP15.17■□□□□ 0.02
GGPS1-207ENST00000489692 TMX4Q9H1E5 349 aaPredicted RBP15.17■□□□□ 0.02
GGPS1-207ENST00000489692 DDX21Q9NR30 783 aaKnown RBP eCLIP15.17■□□□□ 0.02
GGPS1-207ENST00000489692 CHPF2Q9P2E5 772 aa15.17■□□□□ 0.02
GGPS1-207ENST00000489692 KLRG2A4D1S0 409 aaPredicted RBP15.16■□□□□ 0.02
GGPS1-207ENST00000489692 VEGFAP15692 232 aaPredicted RBP15.16■□□□□ 0.02
GGPS1-207ENST00000489692 DUSP27Q5VZP5 1158 aa15.16■□□□□ 0.02
GGPS1-207ENST00000489692 OLFM4Q6UX06 510 aa15.16■□□□□ 0.02
GGPS1-207ENST00000489692 RTKN2Q8IZC4 609 aa15.16■□□□□ 0.02
GGPS1-207ENST00000489692 ZNF428Q96B54 188 aa15.16■□□□□ 0.02
GGPS1-207ENST00000489692 RBM17Q96I25 401 aaKnown RBP15.16■□□□□ 0.02
GGPS1-207ENST00000489692 NLRP3Q96P20 1036 aa15.16■□□□□ 0.02
GGPS1-207ENST00000489692 ZNF277Q9NRM2 450 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms